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The map label for this gene is ycdM [C]

Identifier: 148659804

GI number: 148659804

Start: 49591

End: 50385

Strand: Reverse

Name: ycdM [C]

Synonym: MRA_0047

Alternate gene names: 148659804

Gene position: 50385-49591 (Counterclockwise)

Preceding gene: 148659805

Following gene: 148659803

Centisome position: 1.14

GC content: 66.54

Gene sequence:

>795_bases
ATGACTTCACTCGTGCGTCCCGATCTCCCCGTTCGTATCGGCGTACAACTGCAGCCGCAGCACGCCCCCCATTACCGCGC
CGTCCGAGACGCCGTCCGCCGGTGCGAGGACATCGGTGTGGACATCGCTTTTACCTGGGACCACTTCTTTCCGCTCTACG
GCGACCCTGACGGCCCACACTTCGAATGCTGGACCGTCTTGGGAGCCTGGGCCGAGCAAACGTCGCACATCGAAATCGGC
GCTCTAGTGACGTGCAACTCCTACCGCAATCCGGAGCTGCTTGCCGACATGGCCCGTACCGTCGACCACATCTCCGGCGG
CCGGCTCATCCTGGGTATCGGGTCGGGCTGGAAACAGAAGGACTACGACGAGTACGGCTACCGGTTCGGCACAGCGGGCA
GCCGCCTCGACGACCTGGCGGCTGCGCTGCCCCGGATCAAGGCGCGGCTTGGCAAGCTGAACCCGCCGCCGACACGGGAC
ATCCCGGTGCTGATCGGCGGCGGCGGAGAGCGTAAGACCCTGCGACTGGTCGCCGAGTATGCCGATATCTGGCACAGCTT
TACCGCCGGGGACAGCTACCTAGCGAAGTCGGCCGTGCTGAGCACGCACTGCTCGACCGTCGGCCGAAACCCAGCGACTA
TCGAACGCTCCGCCGCGGTCGACGGCGGCGGGCTGATCGCCAGCGCCGAAGCCCTCGCCGGTCTCGGTGTCACGCTGTTG
ACCGTTGGCTGTGACGGTCCCGACTACGACCTGAGCGCTGCGGCCGCGCTTTGCAGGTGGCGCGATGGCCGGTGA

Upstream 100 bases:

>100_bases
CGTCGAGAAGTCAGGCCACTCGGTGCAAAGTGACCAACCGCGCGCCCTGATCGAGATCGTGCGCGGGGTGCTCGACACAC
GCTGAGCCTACGGTGGACCC

Downstream 100 bases:

>100_bases
ACTCCGGTTGACGTCTGTCAGATCGCGTTACCCCCGGCTTCATCTGGGAAACACCACAACGCAGACGCCGAGTCATGAGA
AACTTGCCAGCGCCGGATGG

Product: putative oxidoreductase

Products: NA

Alternate protein names: Luciferase Family Protein; Oxidoreductase; Monooxygenase; MmcI Protein; Luciferase-Like Monooxygenase Superfamily; Alkanesulfonate Monooxygenase; Luciferase-Like Protein; Luciferase; Luciferase-Like Subgroup; 5 10-Methylenetetrahydromethanopterin Reductase; Fmn-Dependent Monooxygenase; Flavin-Dependent Oxidoreductase; Dehydrogenase; Luciferase-Like Oxidoreductase; Sugar Transporter Superfamily Protein

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIG
ALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRD
IPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL
TVGCDGPDYDLSAAAALCRWRDGR

Sequences:

>Translated_264_residues
MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIG
ALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRD
IPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL
TVGCDGPDYDLSAAAALCRWRDGR
>Mature_263_residues
TSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGA
LVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDI
PVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLT
VGCDGPDYDLSAAAALCRWRDGR

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28525; Mature: 28393

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK
EEHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY
CCHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEHHHHHHCCCEEEE
TVGCDGPDYDLSAAAALCRWRDGR
EEECCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPH
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
FECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQK
EEHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
DYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPVLIGGGGERKTLRLVAEY
CCHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
ADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEHHHHHHCCCEEEE
TVGCDGPDYDLSAAAALCRWRDGR
EEECCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA