| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is bioF2 [C]
Identifier: 148659792
GI number: 148659792
Start: 35653
End: 37968
Strand: Direct
Name: bioF2 [C]
Synonym: MRA_0035
Alternate gene names: 148659792
Gene position: 35653-37968 (Clockwise)
Preceding gene: 148659791
Following gene: 148659793
Centisome position: 0.81
GC content: 62.05
Gene sequence:
>2316_bases ATGCCCACTGGCTTGGGCTATGACTTTCTGCGCCCTGTCGAGGACTCGGGGATCAACGACCTGAAGCACTATTACTTCAT GGCGGATTTGGCCGATGGGCAACCGCTAGGCCGGGCAAACCTCTATAGCGTCTGTTTCGACCTGGCCACCACCGACCGCA AGCTCACTCCGGCCTGGCGAACGACCATCAAACGGTGGTTTCCGGGGTTTATGACCTTCCGTTTCCTCGAGTGCGGGTTG CTCACCATGGTGAGCAACCCGCTGGCGTTGCGGTCCGACACCGACTTGGAGCGGGTATTGCCTGTGCTGGCCGGCCAGAT GGACCAGTTGGCGCATGACGACGGGTCGGATTTCTTGATGATCCGGGACGTGGACCCGGAACACTACCAGCGATACCTTG ACATCCTGCGCCCGTTGGGCTTTCGGCCTGCGCTGGGCTTTTCCCGGGTAGACACGACCATCAGCTGGTCGAGCGTGGAA GAGGCACTGGGCTGCCTGTCTCACAAAAGGCGCCTGCCGTTGAAGACGTCGCTGGAGTTTCGTGAGCGGTTCGGTATCGA GGTCGAGGAACTCGACGAGTATGCCGAGCATGCGCCGGTATTGGCCCGGCTTTGGCGCAACGTCAAGACGGAGGCAAAGG ATTACCAGCGCGAGGACCTGAACCCTGAGTTCTTCGCGGCGTGTTCTCGGCATCTGCATGGACGTAGCAGACTGTGGTTG TTCCGCTACCAGGGCACGCCAATTGCCTTCTTTTTGAACGTTTGGGGTGCGGATGAGAACTACATACTGCTTGAGTGGGG CATCGATCGTGATTTTGAACATTATAGGAAGGCGAATCTGTACCGGGCGGCGCTGATGCTCAGCCTAAAAGATGCGATCA GCCGAGATAAACGGCGAATGGAAATGGGTATTACGAACTATTTCACAAAACTTCGCATTCCGGGTGCCCGAGTCATACCG ACCATCTATTTCCTGCGTCACAGCACGGATCCGGTGCATACGGCAACGTTAGCGCGAATGATGATGCACAATATTCAACG GCCAACGCTACCCGACGATATGTCGGAGGAATTCTGTCGCTGGGAAGAGCGAATACGTCTGGACCAGGACGGGCTACCCG AACACGATATCTTTCGCAAGATCGATCGTCAGCACAAATACACGGGGCTCAAACTCGGCGGAGTCTACGGTTTTTATCCC CGATTCACCGGACCGCAGCGATCCACGGTCAAGGCCGCGGAGCTGGGCGAGATCGTGTTGCTGGGCACGAACTCGTATCT GGGCCTGGCCACCCATCCAGAGGTGGTGGAGGCCTCGGCGGAGGCCACGCGACGGTACGGCACCGGCTGCTCGGGTTCGC CGTTGCTGAACGGCACGTTGGACTTGCACGTCTCGCTTGAGCAGGAACTAGCCTGTTTTTTGGGCAAACCCGCCGCCGTG TTGTGCTCCACCGGATATCAGAGCAACCTGGCGGCGATCAGCGCGCTATGCGAATCCGGGGACATGATCATCCAAGACGC GCTGAACCACCGCAGCCTGTTCGACGCCGCCAGGTTGTCCGGGGCCGACTTCACCTTGTACCGGCACAACGACATGGACC ACCTGGCGCGGGTGCTACGCCGCACCGAGGGGCGCCGCCGGATCATCGTCGTGGACGCGGTGTTCAGCATGGAAGGCACC GTCGCCGACCTGGCCACCATCGCCGAGCTTGCCGACCGGCACGGCTGCCGGGTCTATGTGGACGAGTCCCATGCGCTGGG CGTGCTCGGCCCCGACGGGCGAGGAGCTTCGGCCGCGTTGGGTGTCTTGGCGCGCATGGACGTGGTGATGGGCACGTTCA GCAAATCCTTTGCCTCCGTCGGCGGGTTCATCGCCGGAGATCGGCCCGTCGTGGACTACATCCGGCACAACGGTTCAGGT CATGTGTTTTCCGCCAGCCTGCCGCCGGCCGCCGCGGCTGCCACCCACGCGGCTCTGCGCGTCAGTCGGCGTGAACCCGA CCGGCGGGCTCGGGTGCTGGCCGCGGCCGAGTACATGGCCACCGGCCTGGCACGGCAGGGCTATCAGGCCGAGTATCACG GAACCGCGATCGTGCCGGTGATCCTGGGCAACCCGACCGTGGCGCATGCGGGCTATCTGCGGCTGATGCGCTCCGGGGTG TATGTGAACCCGGTGGCCCCCCCAGCCGTGCCGGAGGAGCGTTCGGGATTCCGCACCAGCTACCTAGCCGACCACCGACA ATCTGACCTCGACCGGGCCTTGCACGTGTTTGCCGGCCTTGCCGAGGACCTGACCCCGCAAGGAGCCGCGCTATGA
Upstream 100 bases:
>100_bases GGTGAATGTGGATACGGACAATGACAGGCCCACGCTGGCGAGGGTTTACCGCAGCCTGCGGGACATTTGTCCGGACAGCT GGAATCTTCCGGGCGGTCGG
Downstream 100 bases:
>100_bases AAGAGGCCATCAACGCCACCATCCAACGGATCTTGCGAACCGACCGCGGCATCACCGCGAACCAGGTACTCGTCGACGAC CTGGGTTTTGACTCGCTCAA
Product: 8-amino-7-oxononanoate synthase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 771; Mature: 770
Protein sequence:
>771_residues MPTGLGYDFLRPVEDSGINDLKHYYFMADLADGQPLGRANLYSVCFDLATTDRKLTPAWRTTIKRWFPGFMTFRFLECGL LTMVSNPLALRSDTDLERVLPVLAGQMDQLAHDDGSDFLMIRDVDPEHYQRYLDILRPLGFRPALGFSRVDTTISWSSVE EALGCLSHKRRLPLKTSLEFRERFGIEVEELDEYAEHAPVLARLWRNVKTEAKDYQREDLNPEFFAACSRHLHGRSRLWL FRYQGTPIAFFLNVWGADENYILLEWGIDRDFEHYRKANLYRAALMLSLKDAISRDKRRMEMGITNYFTKLRIPGARVIP TIYFLRHSTDPVHTATLARMMMHNIQRPTLPDDMSEEFCRWEERIRLDQDGLPEHDIFRKIDRQHKYTGLKLGGVYGFYP RFTGPQRSTVKAAELGEIVLLGTNSYLGLATHPEVVEASAEATRRYGTGCSGSPLLNGTLDLHVSLEQELACFLGKPAAV LCSTGYQSNLAAISALCESGDMIIQDALNHRSLFDAARLSGADFTLYRHNDMDHLARVLRRTEGRRRIIVVDAVFSMEGT VADLATIAELADRHGCRVYVDESHALGVLGPDGRGASAALGVLARMDVVMGTFSKSFASVGGFIAGDRPVVDYIRHNGSG HVFSASLPPAAAAATHAALRVSRREPDRRARVLAAAEYMATGLARQGYQAEYHGTAIVPVILGNPTVAHAGYLRLMRSGV YVNPVAPPAVPEERSGFRTSYLADHRQSDLDRALHVFAGLAEDLTPQGAAL
Sequences:
>Translated_771_residues MPTGLGYDFLRPVEDSGINDLKHYYFMADLADGQPLGRANLYSVCFDLATTDRKLTPAWRTTIKRWFPGFMTFRFLECGL LTMVSNPLALRSDTDLERVLPVLAGQMDQLAHDDGSDFLMIRDVDPEHYQRYLDILRPLGFRPALGFSRVDTTISWSSVE EALGCLSHKRRLPLKTSLEFRERFGIEVEELDEYAEHAPVLARLWRNVKTEAKDYQREDLNPEFFAACSRHLHGRSRLWL FRYQGTPIAFFLNVWGADENYILLEWGIDRDFEHYRKANLYRAALMLSLKDAISRDKRRMEMGITNYFTKLRIPGARVIP TIYFLRHSTDPVHTATLARMMMHNIQRPTLPDDMSEEFCRWEERIRLDQDGLPEHDIFRKIDRQHKYTGLKLGGVYGFYP RFTGPQRSTVKAAELGEIVLLGTNSYLGLATHPEVVEASAEATRRYGTGCSGSPLLNGTLDLHVSLEQELACFLGKPAAV LCSTGYQSNLAAISALCESGDMIIQDALNHRSLFDAARLSGADFTLYRHNDMDHLARVLRRTEGRRRIIVVDAVFSMEGT VADLATIAELADRHGCRVYVDESHALGVLGPDGRGASAALGVLARMDVVMGTFSKSFASVGGFIAGDRPVVDYIRHNGSG HVFSASLPPAAAAATHAALRVSRREPDRRARVLAAAEYMATGLARQGYQAEYHGTAIVPVILGNPTVAHAGYLRLMRSGV YVNPVAPPAVPEERSGFRTSYLADHRQSDLDRALHVFAGLAEDLTPQGAAL >Mature_770_residues PTGLGYDFLRPVEDSGINDLKHYYFMADLADGQPLGRANLYSVCFDLATTDRKLTPAWRTTIKRWFPGFMTFRFLECGLL TMVSNPLALRSDTDLERVLPVLAGQMDQLAHDDGSDFLMIRDVDPEHYQRYLDILRPLGFRPALGFSRVDTTISWSSVEE ALGCLSHKRRLPLKTSLEFRERFGIEVEELDEYAEHAPVLARLWRNVKTEAKDYQREDLNPEFFAACSRHLHGRSRLWLF RYQGTPIAFFLNVWGADENYILLEWGIDRDFEHYRKANLYRAALMLSLKDAISRDKRRMEMGITNYFTKLRIPGARVIPT IYFLRHSTDPVHTATLARMMMHNIQRPTLPDDMSEEFCRWEERIRLDQDGLPEHDIFRKIDRQHKYTGLKLGGVYGFYPR FTGPQRSTVKAAELGEIVLLGTNSYLGLATHPEVVEASAEATRRYGTGCSGSPLLNGTLDLHVSLEQELACFLGKPAAVL CSTGYQSNLAAISALCESGDMIIQDALNHRSLFDAARLSGADFTLYRHNDMDHLARVLRRTEGRRRIIVVDAVFSMEGTV ADLATIAELADRHGCRVYVDESHALGVLGPDGRGASAALGVLARMDVVMGTFSKSFASVGGFIAGDRPVVDYIRHNGSGH VFSASLPPAAAAATHAALRVSRREPDRRARVLAAAEYMATGLARQGYQAEYHGTAIVPVILGNPTVAHAGYLRLMRSGVY VNPVAPPAVPEERSGFRTSYLADHRQSDLDRALHVFAGLAEDLTPQGAAL
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=344, Percent_Identity=32.5581395348837, Blast_Score=190, Evalue=5e-48, Organism=Homo sapiens, GI284448556, Length=342, Percent_Identity=32.4561403508772, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI83977442, Length=325, Percent_Identity=32.6153846153846, Blast_Score=180, Evalue=5e-45, Organism=Homo sapiens, GI83977444, Length=325, Percent_Identity=32.6153846153846, Blast_Score=180, Evalue=5e-45, Organism=Homo sapiens, GI83977440, Length=325, Percent_Identity=32.6153846153846, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI119220554, Length=378, Percent_Identity=30.952380952381, Blast_Score=173, Evalue=6e-43, Organism=Homo sapiens, GI4758668, Length=356, Percent_Identity=31.4606741573034, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI4502025, Length=338, Percent_Identity=31.0650887573964, Blast_Score=158, Evalue=2e-38, Organism=Homo sapiens, GI40316939, Length=338, Percent_Identity=31.0650887573964, Blast_Score=158, Evalue=2e-38, Organism=Homo sapiens, GI5454084, Length=262, Percent_Identity=32.4427480916031, Blast_Score=144, Evalue=4e-34, Organism=Escherichia coli, GI1790046, Length=367, Percent_Identity=33.7874659400545, Blast_Score=211, Evalue=2e-55, Organism=Escherichia coli, GI1786993, Length=363, Percent_Identity=33.3333333333333, Blast_Score=174, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71994529, Length=393, Percent_Identity=30.2798982188295, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI32566772, Length=378, Percent_Identity=29.1005291005291, Blast_Score=175, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17560912, Length=357, Percent_Identity=27.4509803921569, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17560914, Length=357, Percent_Identity=27.4509803921569, Blast_Score=151, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71982617, Length=268, Percent_Identity=33.2089552238806, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71982625, Length=268, Percent_Identity=33.2089552238806, Blast_Score=149, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6320267, Length=366, Percent_Identity=30.0546448087432, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6320438, Length=391, Percent_Identity=28.9002557544757, Blast_Score=173, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6323954, Length=259, Percent_Identity=28.1853281853282, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24662918, Length=382, Percent_Identity=30.1047120418848, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17137420, Length=368, Percent_Identity=30.9782608695652, Blast_Score=176, Evalue=5e-44, Organism=Drosophila melanogaster, GI17136286, Length=392, Percent_Identity=27.8061224489796, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24653280, Length=277, Percent_Identity=29.6028880866426, Blast_Score=142, Evalue=1e-33, Organism=Drosophila melanogaster, GI24653276, Length=277, Percent_Identity=29.6028880866426, Blast_Score=142, Evalue=1e-33, Organism=Drosophila melanogaster, GI24653278, Length=277, Percent_Identity=29.6028880866426, Blast_Score=142, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR010962 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 86244; Mature: 86113
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTGLGYDFLRPVEDSGINDLKHYYFMADLADGQPLGRANLYSVCFDLATTDRKLTPAWR CCCCCCCHHHCCCCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH TTIKRWFPGFMTFRFLECGLLTMVSNPLALRSDTDLERVLPVLAGQMDQLAHDDGSDFLM HHHHHHCCHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCHHHHHHCCCCCCEEE IRDVDPEHYQRYLDILRPLGFRPALGFSRVDTTISWSSVEEALGCLSHKRRLPLKTSLEF EECCCHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEHHHHHHHHHHHHHHCCCCCCCCHHH RERFGIEVEELDEYAEHAPVLARLWRNVKTEAKDYQREDLNPEFFAACSRHLHGRSRLWL HHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEE FRYQGTPIAFFLNVWGADENYILLEWGIDRDFEHYRKANLYRAALMLSLKDAISRDKRRM EEECCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMGITNYFTKLRIPGARVIPTIYFLRHSTDPVHTATLARMMMHNIQRPTLPDDMSEEFCR HHHHHHHHHHEECCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH WEERIRLDQDGLPEHDIFRKIDRQHKYTGLKLGGVYGFYPRFTGPQRSTVKAAELGEIVL HHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCEEECCCCCCCCCCCCEEHHCCCCEEE LGTNSYLGLATHPEVVEASAEATRRYGTGCSGSPLLNGTLDLHVSLEQELACFLGKPAAV EECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCEE LCSTGYQSNLAAISALCESGDMIIQDALNHRSLFDAARLSGADFTLYRHNDMDHLARVLR EECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH RTEGRRRIIVVDAVFSMEGTVADLATIAELADRHGCRVYVDESHALGVLGPDGRGASAAL HCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHH GVLARMDVVMGTFSKSFASVGGFIAGDRPVVDYIRHNGSGHVFSASLPPAAAAATHAALR HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH VSRREPDRRARVLAAAEYMATGLARQGYQAEYHGTAIVPVILGNPTVAHAGYLRLMRSGV HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCC YVNPVAPPAVPEERSGFRTSYLADHRQSDLDRALHVFAGLAEDLTPQGAAL EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PTGLGYDFLRPVEDSGINDLKHYYFMADLADGQPLGRANLYSVCFDLATTDRKLTPAWR CCCCCCHHHCCCCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH TTIKRWFPGFMTFRFLECGLLTMVSNPLALRSDTDLERVLPVLAGQMDQLAHDDGSDFLM HHHHHHCCHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCHHHHHHCCCCCCEEE IRDVDPEHYQRYLDILRPLGFRPALGFSRVDTTISWSSVEEALGCLSHKRRLPLKTSLEF EECCCHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEHHHHHHHHHHHHHHCCCCCCCCHHH RERFGIEVEELDEYAEHAPVLARLWRNVKTEAKDYQREDLNPEFFAACSRHLHGRSRLWL HHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEE FRYQGTPIAFFLNVWGADENYILLEWGIDRDFEHYRKANLYRAALMLSLKDAISRDKRRM EEECCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMGITNYFTKLRIPGARVIPTIYFLRHSTDPVHTATLARMMMHNIQRPTLPDDMSEEFCR HHHHHHHHHHEECCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH WEERIRLDQDGLPEHDIFRKIDRQHKYTGLKLGGVYGFYPRFTGPQRSTVKAAELGEIVL HHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCEEECCCCCCCCCCCCEEHHCCCCEEE LGTNSYLGLATHPEVVEASAEATRRYGTGCSGSPLLNGTLDLHVSLEQELACFLGKPAAV EECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCEE LCSTGYQSNLAAISALCESGDMIIQDALNHRSLFDAARLSGADFTLYRHNDMDHLARVLR EECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH RTEGRRRIIVVDAVFSMEGTVADLATIAELADRHGCRVYVDESHALGVLGPDGRGASAAL HCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHH GVLARMDVVMGTFSKSFASVGGFIAGDRPVVDYIRHNGSGHVFSASLPPAAAAATHAALR HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH VSRREPDRRARVLAAAEYMATGLARQGYQAEYHGTAIVPVILGNPTVAHAGYLRLMRSGV HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCC YVNPVAPPAVPEERSGFRTSYLADHRQSDLDRALHVFAGLAEDLTPQGAAL EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA