| Definition | Roseiflexus sp. RS-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009523 |
| Length | 5,801,598 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 148654404
GI number:
Start: 270768
End: 275903
Strand: Direct
Name: Not Available
Synonym: RoseRS_0223
Alternate gene names: NA
Gene position: NA
Preceding gene: 148654403
Following gene: 148654405
Centisome position: NA
GC content: NA
Gene sequence:
>5136_bases ATGGACATCTTCAAGTTGCGCGACCATATCGTCAATGAGTTCGCCGCATATACGCAAAGTTTCCTGAACATTCTCGACCC CGATATTCGTGAGTTTGTGCAGCAAGAACTTGCGCGCGGCAAACTCTGGCCCGATGCCCTCGTGCAACTCTCACCCGCCT ACGACCGCTCTCTGACGGTTGCCGATCTGGTTGAACAGGGCATCCTGCATCCGCTCTGCCGTGATATTTTTCAGGTCGGC GGAGCGACGAAATCATCCCTGCGGCTCTACCGCCATCAGAAACAGGCCATCGATATGGCCGCCGCCGGTCGGCACTATGT GGTGACGACCGGAACCGGTTCAGGCAAGAGCCTGACCTATATCATCCCGATTGTCAACCACATCCTGCGCAACCGTCCCG AAGATGGGCGTGTTCGTGCAATCATCGTCTACCCGATGAATGCGCTGATCAACTCACAGGCGCAGGCGATCAAGCGTTTC TTTGAGAATGCGTCCGGCAGGTGTCCGGTACGTTTTGCGCGCTACACCGGTCAGGAAAACGACGCGGAAAAAAAGGGCGT TCAGGAGAACCCGCCGCACATCCTGTTGACCAACTATGTGATGCTGGAATTGATGCTGACGCGCCCCGAGGAGTTTGCGT TTGTCGATGCCAGCGCCGCCAACCTGCAATTCGTGGTGCTCGACGAATTGCATACCTACCGCGGGCGTCAGGGCGCCGAC GTGGCGATGCTGATGCGGCGTCTGCGCGAGCGCTGCGGCAATCCGAACCTGATCTGCATTGGCACCAGCGCCACGATCGT CAGTGGCGAGTCGGTTGATGATCGGCGAGCGGGCGTTGCCCGTGTAGCCGAGACGATCTTCGGCGTGCCGTTCACTGCCG AGCAGGTGATCGAGGAAACGCTGATCTACGCAACCCCTGCGGCATCGATCACAAATGCAGAGTTGCGCGCGGCTCTCGAA GATAATCCTCCGGAACGCCTGGACTGGAATGCCTTTCAACGGCATCCGCTGGCGCGCTGGATCGAACAGACTTTCAGTTT GCGCACCGATGCACAGGGACGCCAGCGCCGCGCCGAGCCACGCACACTGCGTGACGGTGCACAGGCGCTTGCGCAGCAGA CCGGCGTTCCTGTCGAACGGTGCGAGAAGTATCTCCGCCATTTCTTCGCCCTGGGCAGCAACGTCAGAGACCCGGAGGGC AATCCGGGGTTCGCCTTCAAACTGCACCAGTTCATCTCCCAGGGCAGCGCCGTGTACAGCACGCTGGAACTTCCGCCAGC GCGTCATCTGACGCTCGAAGGGCAGCAGTATGTCGCCGGTTCGGACGGTGATCGGTTACTCTTCCCGCTTGTTTTCTGCC GCGAATGTGGTCAGCATTATGCGCTCTGCGCCTACGACGAGGAGCACGGTCAGGTTGTCCCGCGGCACCCGATGCTGCGC GGCGAGGATGTGACCGAACCGGCGCGCGCCGGATACCTGCTGATCGGCGCCGACGCCTGGAGCGAGGAACTCGAGGACAC GTTGCCCGACACGTGGTTTAATGTGCGCCGCAACGGGCGCACACTGAAGAAGGAGTATCGCGAGTTCGCACCAAAGCGCC TGTACGTGCGCCCCGACGGTCAGACGTTCGATCCGGAGCGGGTTGGCGCCCGTCCTGGCGGTGCAGTGGACGCCTGGTTT CTTGCTGCGCCGTTTCTCACATGCCTCTCCTGCGGCGCGGTGTACACCCGCAGAGACAGGGACGACTTTCGGAAACTGGC GCGCCTGAGCAGCGAGGGGCGCAGCACGGCGACCACGCTGATCTCGCTGAGCGCCATCGAAGCGATGCACACCACCGACC TCGATCCGAAAGCGCGCAAATTGCTCAGTTTTACCGATAATCGCCAGGATGCGTCGTTGCAGGCGGGCCATTTCAACGAC TTTGCCGCCGTCAGTCTGTTGCGGGCTGCAATCGCTGCTGCGCTGCAGAAAGCTTCGCCTTCCAATCCACTGACCCACCT GACTATCGCACCAGCGGTGTTCAGGGAACTCAACCTGCCGCAGGAGGCGTATGCGCGCACCGTCGGCGAATATGGCGGCG CCCGGCGACGCAACGAGGAAGTGCTGACCGCGTATCTGGAGTATCGCATCTTCGAGGACCTGCGCCGCTCATGGCGCGTG ACGCAACCCAACCTGGAACAGTGCGGTTTGCTGCGGATCGACTATCTCGACCTGCACGATCTCTGTGCTGATGATCGACC GTGGCAGCGTCACCCGGTTCTGGCGGCTACGCCGCCTGATCAGCGCGAGCGCACCATCCGCGCCCTGCTCGACCATATGC GGCGCGAACTGGCAATCGATGCACCCTGTCTCGATCCGGAACAGCAACCAGAACTGCTCCGCCGCGTCGATGCTGCGCTC AAAGAGCCATGGGTCTTCGATGAAGCCGAAAAGCGCCCAAATGGGTTGCGCATGGCGACGCGCTTCGTGCTCCCCGGCGA CGATACGAACGTTCCCGGCGCGCGAAGCCTCTCCCGATACAGCCGCGCAGGGCGCTTCCTGCGCTCATCGGCAGCCTGGA GCGCGCTCGAAGCGCCGCTCGATGATCAGGAGTATGCGGCGCTGCTGACGACATTGTTCGAGATCCTGATGGGCGCGGGG ATTCTGGTTGACGTGACTGTGCGGCGCGGACTGCGCGCATTTCAGATCCGGCGCGATGCGTTGCTGTGGTTGCCCGGTGA TGGAACGCCGCCGCTGCCTGATCCGATCCGTTCCCAACGAATGACGACTGTTGCACGGGCGGCGTCTGACGACACGCAGA ACGGCGCTGCTCGCACCCCGGCGAATGCCTTCTTTTCCAGGTTCTACCTCCGTCCGCCAGAGCGGTTGCTGCGGATCGAA GGGCGGGAGCACACGGGACAGGTAACGCAGGAAGACCGTCAGGAGCGCGAGCGACGCTTCCGTGAAGGCGAACTTCCGGT GCTCTTCTGCTCGCCAACTATGGAACTGGGGATCGACATCGCCGACCTGAATGCGGTTCATATGCGCAACATGCCGCCAA CCCCCGCCAACTATGCGCAGCGATCCGGTCGAGCAGGGCGCAGCGGTCAACCCGCGCTGGTCATCACCTACTGTTCGACC GCCAGCGGGCACGACCAGTATTTCTTTCAGCGCCCGAAGGACATGGTCGCCGGGGCAGTGGCAGCGCCGCAGATCGACCT GACCAACGAAGATTTGCTGAAGGCGCATGTCCACGCGATCTGGCTGGCGGAGACGGGGCTTGATCTGAAACGCTCAATGC TCGACCTGATCGATGCCGGCGCGCCAGACCTGCCGCTCAAATCGGAGGTGCAGGAACACATCATGCTGGACGATTCCCGC CGGGCAGCGTGTGTCGCCCGGGCGCGGCGCGCCTTCGGCGGGCTGCTCGCATCTCTTCCAGGCGAATGGTTCGACGAGGG GTGGCTGGAGCGGGTCATCAACGACGCGCCGCGTCACTTCGACGAGGCTTGCAACCGCTGGCGACAACTCTACACCGATG CGCGGGCGCAGTTAAACGAAGCGCGTCGCATCACCGACGACTGGCACCGCGGCATCGGCACGCGCGAGATTGCCGACGAT GCCGAACAGCGTGAGAAAGAAGCGAAACGCCAGATCGATCTGCTGTGCAGCCACGAGCGTTCCAGCAGCGAAAGCGACTT CTACCCCTACCGCTACTTCGCCAGCGAGGGGTTTCTCCCCGGTTACAACTTCCCGCGTCTGCCGGTGCGCGCATTTCTGG CGCACAGACTGGGAGAAGGGGTTTACCTGGCTCGACCGCGTTTCCTGGCGATCCGCGAGTTTGGTCCGCAAAACATCATT TACCACGAAGGGCGCAAATATCGCGTGACCCGCACCACCATCCCGGCTGGTGATGCAAGCCGTCGCTTTCTGCGCGCAAA GATCTGTCGCGCCTGCGGCTACTTCCACGAAGGCGGCGATGCCGATGTCTGCGACCAGTGCGGCTTACTGCTCACCGGTC AGAATACAACGATCCTGCCGACCCTCTTCGAGATGAGCACCGTCATCGCCACCCCCGCCGACCGGATCACCTGTGAAGAG GAAGAACGTGTTCGCAAGGGGTACAATCTGGAAATGTTCTACCAGTTTGCGCGGGGACCGCACGGCGCTCGCCGTGATAC AGGCAATGTTCAACTGGAGACGGCGGAAGGGCGCCAGGAGCATATTGCGCTCACCTATGCGCCAACGGCGACGATCTGGC AGGTGAATCACGGCTGGAAGCGCTCGAATAACGGCTTTGCGCTCAACGTGCGCAGTGGCGAATGGGGAAGCGACCCCGCC GATGATGATGATAACGAAGCTGATCCAGGTCAGCGGAACGAAGATGTGCGCACGGGCGTGCGGCTCGTGGTGCGCGACAC GCGCAATCTGCTCGTTGTTGAACTGCCGCCGTCGCTCGCCGCGCAGGAACAGGTTGCGGCAAGCCTGCAGTATGCGTTGC AATCCGGCATCACCGTCGCTTTCCAGCTCGAAGAGCAAGAGTTGAGTTCCAGACGTCTCGGTTCAGGTGCGACGACGCGC CTGATCTTCTGGGAAGCCGCCGAGGGAGGAGCGGGAGTGCTGCGACGGTTGGTGGAGGAGCCGGAAGCGCTTGCGCGGGT CGCGCGCGCTGCGCTCGAACTCTGCCACTACGATGAACATGGACAGGAGCGCAGTGATGTTGGAGAATGCGTGCGCGCCT GCTACCGCTGCCTCCTCTCGTACAGCAACCAGCCCGACCACGGGCTGCTCGACCGCCGCTCCATCCGCGATCTCCTGATC GATCTGTCCCGGTCACGGGTGCAGCGCCAGCGCCACGATGATCGTGATACACCCGAGCACACCGCGCTACCCGCCGTCTC TCCCGCCATTGCGCGGGTGCTGACTGCCATCCGCGACCTGGGCGGGCGTGAACCGGATCAGATCCTGCCCGATCTGGACG GCTGCCGCCCACACCTCGTCTATCGTCCAGGCTACTGCATTCTCTGCCCGGAAGCGGGTGAAGACCTCGCTCCTCTGCGC GCTACCCTGGAAGAGTCCGGGTATGCGGTCGTCGTCATTCACCCGAACGACGATGTGGCCGCAGTGCTGGGATCATACGA CTTCTGGCGCATGTGA
Upstream 100 bases:
>100_bases TGACCGCTGGCACAGCTGCACGCAGAGACGCCGCCGTGCGCCTGATTGAAGAAACTGTTCGTCGTTTCCAGGCGGGACAA AAATATGTGGGGTAGTAGCT
Downstream 100 bases:
>100_bases TCAAAGCGCCTGAATGGTTAGCATCCCGTTATCCAGGGTTGTTATTTCTTTTCTTTGTGAAGTTTGACACAATATATTTC GTGTGATAGACTCGGTGCAT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1711_residues MDIFKLRDHIVNEFAAYTQSFLNILDPDIREFVQQELARGKLWPDALVQLSPAYDRSLTVADLVEQGILHPLCRDIFQVG GATKSSLRLYRHQKQAIDMAAAGRHYVVTTGTGSGKSLTYIIPIVNHILRNRPEDGRVRAIIVYPMNALINSQAQAIKRF FENASGRCPVRFARYTGQENDAEKKGVQENPPHILLTNYVMLELMLTRPEEFAFVDASAANLQFVVLDELHTYRGRQGAD VAMLMRRLRERCGNPNLICIGTSATIVSGESVDDRRAGVARVAETIFGVPFTAEQVIEETLIYATPAASITNAELRAALE DNPPERLDWNAFQRHPLARWIEQTFSLRTDAQGRQRRAEPRTLRDGAQALAQQTGVPVERCEKYLRHFFALGSNVRDPEG NPGFAFKLHQFISQGSAVYSTLELPPARHLTLEGQQYVAGSDGDRLLFPLVFCRECGQHYALCAYDEEHGQVVPRHPMLR GEDVTEPARAGYLLIGADAWSEELEDTLPDTWFNVRRNGRTLKKEYREFAPKRLYVRPDGQTFDPERVGARPGGAVDAWF LAAPFLTCLSCGAVYTRRDRDDFRKLARLSSEGRSTATTLISLSAIEAMHTTDLDPKARKLLSFTDNRQDASLQAGHFND FAAVSLLRAAIAAALQKASPSNPLTHLTIAPAVFRELNLPQEAYARTVGEYGGARRRNEEVLTAYLEYRIFEDLRRSWRV TQPNLEQCGLLRIDYLDLHDLCADDRPWQRHPVLAATPPDQRERTIRALLDHMRRELAIDAPCLDPEQQPELLRRVDAAL KEPWVFDEAEKRPNGLRMATRFVLPGDDTNVPGARSLSRYSRAGRFLRSSAAWSALEAPLDDQEYAALLTTLFEILMGAG ILVDVTVRRGLRAFQIRRDALLWLPGDGTPPLPDPIRSQRMTTVARAASDDTQNGAARTPANAFFSRFYLRPPERLLRIE GREHTGQVTQEDRQERERRFREGELPVLFCSPTMELGIDIADLNAVHMRNMPPTPANYAQRSGRAGRSGQPALVITYCST ASGHDQYFFQRPKDMVAGAVAAPQIDLTNEDLLKAHVHAIWLAETGLDLKRSMLDLIDAGAPDLPLKSEVQEHIMLDDSR RAACVARARRAFGGLLASLPGEWFDEGWLERVINDAPRHFDEACNRWRQLYTDARAQLNEARRITDDWHRGIGTREIADD AEQREKEAKRQIDLLCSHERSSSESDFYPYRYFASEGFLPGYNFPRLPVRAFLAHRLGEGVYLARPRFLAIREFGPQNII YHEGRKYRVTRTTIPAGDASRRFLRAKICRACGYFHEGGDADVCDQCGLLLTGQNTTILPTLFEMSTVIATPADRITCEE EERVRKGYNLEMFYQFARGPHGARRDTGNVQLETAEGRQEHIALTYAPTATIWQVNHGWKRSNNGFALNVRSGEWGSDPA DDDDNEADPGQRNEDVRTGVRLVVRDTRNLLVVELPPSLAAQEQVAASLQYALQSGITVAFQLEEQELSSRRLGSGATTR LIFWEAAEGGAGVLRRLVEEPEALARVARAALELCHYDEHGQERSDVGECVRACYRCLLSYSNQPDHGLLDRRSIRDLLI DLSRSRVQRQRHDDRDTPEHTALPAVSPAIARVLTAIRDLGGREPDQILPDLDGCRPHLVYRPGYCILCPEAGEDLAPLR ATLEESGYAVVVIHPNDDVAAVLGSYDFWRM
Sequences:
NA
Specific function: NA
COG id: COG1205
COG function: function code R; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA