Definition Roseiflexus sp. RS-1 chromosome, complete genome.
Accession NC_009523
Length 5,801,598

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 148654404

GI number:

Start: 270768

End: 275903

Strand: Direct

Name: Not Available

Synonym: RoseRS_0223

Alternate gene names: NA

Gene position: NA

Preceding gene: 148654403

Following gene: 148654405

Centisome position: NA

GC content: NA

Gene sequence:

>5136_bases
ATGGACATCTTCAAGTTGCGCGACCATATCGTCAATGAGTTCGCCGCATATACGCAAAGTTTCCTGAACATTCTCGACCC
CGATATTCGTGAGTTTGTGCAGCAAGAACTTGCGCGCGGCAAACTCTGGCCCGATGCCCTCGTGCAACTCTCACCCGCCT
ACGACCGCTCTCTGACGGTTGCCGATCTGGTTGAACAGGGCATCCTGCATCCGCTCTGCCGTGATATTTTTCAGGTCGGC
GGAGCGACGAAATCATCCCTGCGGCTCTACCGCCATCAGAAACAGGCCATCGATATGGCCGCCGCCGGTCGGCACTATGT
GGTGACGACCGGAACCGGTTCAGGCAAGAGCCTGACCTATATCATCCCGATTGTCAACCACATCCTGCGCAACCGTCCCG
AAGATGGGCGTGTTCGTGCAATCATCGTCTACCCGATGAATGCGCTGATCAACTCACAGGCGCAGGCGATCAAGCGTTTC
TTTGAGAATGCGTCCGGCAGGTGTCCGGTACGTTTTGCGCGCTACACCGGTCAGGAAAACGACGCGGAAAAAAAGGGCGT
TCAGGAGAACCCGCCGCACATCCTGTTGACCAACTATGTGATGCTGGAATTGATGCTGACGCGCCCCGAGGAGTTTGCGT
TTGTCGATGCCAGCGCCGCCAACCTGCAATTCGTGGTGCTCGACGAATTGCATACCTACCGCGGGCGTCAGGGCGCCGAC
GTGGCGATGCTGATGCGGCGTCTGCGCGAGCGCTGCGGCAATCCGAACCTGATCTGCATTGGCACCAGCGCCACGATCGT
CAGTGGCGAGTCGGTTGATGATCGGCGAGCGGGCGTTGCCCGTGTAGCCGAGACGATCTTCGGCGTGCCGTTCACTGCCG
AGCAGGTGATCGAGGAAACGCTGATCTACGCAACCCCTGCGGCATCGATCACAAATGCAGAGTTGCGCGCGGCTCTCGAA
GATAATCCTCCGGAACGCCTGGACTGGAATGCCTTTCAACGGCATCCGCTGGCGCGCTGGATCGAACAGACTTTCAGTTT
GCGCACCGATGCACAGGGACGCCAGCGCCGCGCCGAGCCACGCACACTGCGTGACGGTGCACAGGCGCTTGCGCAGCAGA
CCGGCGTTCCTGTCGAACGGTGCGAGAAGTATCTCCGCCATTTCTTCGCCCTGGGCAGCAACGTCAGAGACCCGGAGGGC
AATCCGGGGTTCGCCTTCAAACTGCACCAGTTCATCTCCCAGGGCAGCGCCGTGTACAGCACGCTGGAACTTCCGCCAGC
GCGTCATCTGACGCTCGAAGGGCAGCAGTATGTCGCCGGTTCGGACGGTGATCGGTTACTCTTCCCGCTTGTTTTCTGCC
GCGAATGTGGTCAGCATTATGCGCTCTGCGCCTACGACGAGGAGCACGGTCAGGTTGTCCCGCGGCACCCGATGCTGCGC
GGCGAGGATGTGACCGAACCGGCGCGCGCCGGATACCTGCTGATCGGCGCCGACGCCTGGAGCGAGGAACTCGAGGACAC
GTTGCCCGACACGTGGTTTAATGTGCGCCGCAACGGGCGCACACTGAAGAAGGAGTATCGCGAGTTCGCACCAAAGCGCC
TGTACGTGCGCCCCGACGGTCAGACGTTCGATCCGGAGCGGGTTGGCGCCCGTCCTGGCGGTGCAGTGGACGCCTGGTTT
CTTGCTGCGCCGTTTCTCACATGCCTCTCCTGCGGCGCGGTGTACACCCGCAGAGACAGGGACGACTTTCGGAAACTGGC
GCGCCTGAGCAGCGAGGGGCGCAGCACGGCGACCACGCTGATCTCGCTGAGCGCCATCGAAGCGATGCACACCACCGACC
TCGATCCGAAAGCGCGCAAATTGCTCAGTTTTACCGATAATCGCCAGGATGCGTCGTTGCAGGCGGGCCATTTCAACGAC
TTTGCCGCCGTCAGTCTGTTGCGGGCTGCAATCGCTGCTGCGCTGCAGAAAGCTTCGCCTTCCAATCCACTGACCCACCT
GACTATCGCACCAGCGGTGTTCAGGGAACTCAACCTGCCGCAGGAGGCGTATGCGCGCACCGTCGGCGAATATGGCGGCG
CCCGGCGACGCAACGAGGAAGTGCTGACCGCGTATCTGGAGTATCGCATCTTCGAGGACCTGCGCCGCTCATGGCGCGTG
ACGCAACCCAACCTGGAACAGTGCGGTTTGCTGCGGATCGACTATCTCGACCTGCACGATCTCTGTGCTGATGATCGACC
GTGGCAGCGTCACCCGGTTCTGGCGGCTACGCCGCCTGATCAGCGCGAGCGCACCATCCGCGCCCTGCTCGACCATATGC
GGCGCGAACTGGCAATCGATGCACCCTGTCTCGATCCGGAACAGCAACCAGAACTGCTCCGCCGCGTCGATGCTGCGCTC
AAAGAGCCATGGGTCTTCGATGAAGCCGAAAAGCGCCCAAATGGGTTGCGCATGGCGACGCGCTTCGTGCTCCCCGGCGA
CGATACGAACGTTCCCGGCGCGCGAAGCCTCTCCCGATACAGCCGCGCAGGGCGCTTCCTGCGCTCATCGGCAGCCTGGA
GCGCGCTCGAAGCGCCGCTCGATGATCAGGAGTATGCGGCGCTGCTGACGACATTGTTCGAGATCCTGATGGGCGCGGGG
ATTCTGGTTGACGTGACTGTGCGGCGCGGACTGCGCGCATTTCAGATCCGGCGCGATGCGTTGCTGTGGTTGCCCGGTGA
TGGAACGCCGCCGCTGCCTGATCCGATCCGTTCCCAACGAATGACGACTGTTGCACGGGCGGCGTCTGACGACACGCAGA
ACGGCGCTGCTCGCACCCCGGCGAATGCCTTCTTTTCCAGGTTCTACCTCCGTCCGCCAGAGCGGTTGCTGCGGATCGAA
GGGCGGGAGCACACGGGACAGGTAACGCAGGAAGACCGTCAGGAGCGCGAGCGACGCTTCCGTGAAGGCGAACTTCCGGT
GCTCTTCTGCTCGCCAACTATGGAACTGGGGATCGACATCGCCGACCTGAATGCGGTTCATATGCGCAACATGCCGCCAA
CCCCCGCCAACTATGCGCAGCGATCCGGTCGAGCAGGGCGCAGCGGTCAACCCGCGCTGGTCATCACCTACTGTTCGACC
GCCAGCGGGCACGACCAGTATTTCTTTCAGCGCCCGAAGGACATGGTCGCCGGGGCAGTGGCAGCGCCGCAGATCGACCT
GACCAACGAAGATTTGCTGAAGGCGCATGTCCACGCGATCTGGCTGGCGGAGACGGGGCTTGATCTGAAACGCTCAATGC
TCGACCTGATCGATGCCGGCGCGCCAGACCTGCCGCTCAAATCGGAGGTGCAGGAACACATCATGCTGGACGATTCCCGC
CGGGCAGCGTGTGTCGCCCGGGCGCGGCGCGCCTTCGGCGGGCTGCTCGCATCTCTTCCAGGCGAATGGTTCGACGAGGG
GTGGCTGGAGCGGGTCATCAACGACGCGCCGCGTCACTTCGACGAGGCTTGCAACCGCTGGCGACAACTCTACACCGATG
CGCGGGCGCAGTTAAACGAAGCGCGTCGCATCACCGACGACTGGCACCGCGGCATCGGCACGCGCGAGATTGCCGACGAT
GCCGAACAGCGTGAGAAAGAAGCGAAACGCCAGATCGATCTGCTGTGCAGCCACGAGCGTTCCAGCAGCGAAAGCGACTT
CTACCCCTACCGCTACTTCGCCAGCGAGGGGTTTCTCCCCGGTTACAACTTCCCGCGTCTGCCGGTGCGCGCATTTCTGG
CGCACAGACTGGGAGAAGGGGTTTACCTGGCTCGACCGCGTTTCCTGGCGATCCGCGAGTTTGGTCCGCAAAACATCATT
TACCACGAAGGGCGCAAATATCGCGTGACCCGCACCACCATCCCGGCTGGTGATGCAAGCCGTCGCTTTCTGCGCGCAAA
GATCTGTCGCGCCTGCGGCTACTTCCACGAAGGCGGCGATGCCGATGTCTGCGACCAGTGCGGCTTACTGCTCACCGGTC
AGAATACAACGATCCTGCCGACCCTCTTCGAGATGAGCACCGTCATCGCCACCCCCGCCGACCGGATCACCTGTGAAGAG
GAAGAACGTGTTCGCAAGGGGTACAATCTGGAAATGTTCTACCAGTTTGCGCGGGGACCGCACGGCGCTCGCCGTGATAC
AGGCAATGTTCAACTGGAGACGGCGGAAGGGCGCCAGGAGCATATTGCGCTCACCTATGCGCCAACGGCGACGATCTGGC
AGGTGAATCACGGCTGGAAGCGCTCGAATAACGGCTTTGCGCTCAACGTGCGCAGTGGCGAATGGGGAAGCGACCCCGCC
GATGATGATGATAACGAAGCTGATCCAGGTCAGCGGAACGAAGATGTGCGCACGGGCGTGCGGCTCGTGGTGCGCGACAC
GCGCAATCTGCTCGTTGTTGAACTGCCGCCGTCGCTCGCCGCGCAGGAACAGGTTGCGGCAAGCCTGCAGTATGCGTTGC
AATCCGGCATCACCGTCGCTTTCCAGCTCGAAGAGCAAGAGTTGAGTTCCAGACGTCTCGGTTCAGGTGCGACGACGCGC
CTGATCTTCTGGGAAGCCGCCGAGGGAGGAGCGGGAGTGCTGCGACGGTTGGTGGAGGAGCCGGAAGCGCTTGCGCGGGT
CGCGCGCGCTGCGCTCGAACTCTGCCACTACGATGAACATGGACAGGAGCGCAGTGATGTTGGAGAATGCGTGCGCGCCT
GCTACCGCTGCCTCCTCTCGTACAGCAACCAGCCCGACCACGGGCTGCTCGACCGCCGCTCCATCCGCGATCTCCTGATC
GATCTGTCCCGGTCACGGGTGCAGCGCCAGCGCCACGATGATCGTGATACACCCGAGCACACCGCGCTACCCGCCGTCTC
TCCCGCCATTGCGCGGGTGCTGACTGCCATCCGCGACCTGGGCGGGCGTGAACCGGATCAGATCCTGCCCGATCTGGACG
GCTGCCGCCCACACCTCGTCTATCGTCCAGGCTACTGCATTCTCTGCCCGGAAGCGGGTGAAGACCTCGCTCCTCTGCGC
GCTACCCTGGAAGAGTCCGGGTATGCGGTCGTCGTCATTCACCCGAACGACGATGTGGCCGCAGTGCTGGGATCATACGA
CTTCTGGCGCATGTGA

Upstream 100 bases:

>100_bases
TGACCGCTGGCACAGCTGCACGCAGAGACGCCGCCGTGCGCCTGATTGAAGAAACTGTTCGTCGTTTCCAGGCGGGACAA
AAATATGTGGGGTAGTAGCT

Downstream 100 bases:

>100_bases
TCAAAGCGCCTGAATGGTTAGCATCCCGTTATCCAGGGTTGTTATTTCTTTTCTTTGTGAAGTTTGACACAATATATTTC
GTGTGATAGACTCGGTGCAT

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1711_residues
MDIFKLRDHIVNEFAAYTQSFLNILDPDIREFVQQELARGKLWPDALVQLSPAYDRSLTVADLVEQGILHPLCRDIFQVG
GATKSSLRLYRHQKQAIDMAAAGRHYVVTTGTGSGKSLTYIIPIVNHILRNRPEDGRVRAIIVYPMNALINSQAQAIKRF
FENASGRCPVRFARYTGQENDAEKKGVQENPPHILLTNYVMLELMLTRPEEFAFVDASAANLQFVVLDELHTYRGRQGAD
VAMLMRRLRERCGNPNLICIGTSATIVSGESVDDRRAGVARVAETIFGVPFTAEQVIEETLIYATPAASITNAELRAALE
DNPPERLDWNAFQRHPLARWIEQTFSLRTDAQGRQRRAEPRTLRDGAQALAQQTGVPVERCEKYLRHFFALGSNVRDPEG
NPGFAFKLHQFISQGSAVYSTLELPPARHLTLEGQQYVAGSDGDRLLFPLVFCRECGQHYALCAYDEEHGQVVPRHPMLR
GEDVTEPARAGYLLIGADAWSEELEDTLPDTWFNVRRNGRTLKKEYREFAPKRLYVRPDGQTFDPERVGARPGGAVDAWF
LAAPFLTCLSCGAVYTRRDRDDFRKLARLSSEGRSTATTLISLSAIEAMHTTDLDPKARKLLSFTDNRQDASLQAGHFND
FAAVSLLRAAIAAALQKASPSNPLTHLTIAPAVFRELNLPQEAYARTVGEYGGARRRNEEVLTAYLEYRIFEDLRRSWRV
TQPNLEQCGLLRIDYLDLHDLCADDRPWQRHPVLAATPPDQRERTIRALLDHMRRELAIDAPCLDPEQQPELLRRVDAAL
KEPWVFDEAEKRPNGLRMATRFVLPGDDTNVPGARSLSRYSRAGRFLRSSAAWSALEAPLDDQEYAALLTTLFEILMGAG
ILVDVTVRRGLRAFQIRRDALLWLPGDGTPPLPDPIRSQRMTTVARAASDDTQNGAARTPANAFFSRFYLRPPERLLRIE
GREHTGQVTQEDRQERERRFREGELPVLFCSPTMELGIDIADLNAVHMRNMPPTPANYAQRSGRAGRSGQPALVITYCST
ASGHDQYFFQRPKDMVAGAVAAPQIDLTNEDLLKAHVHAIWLAETGLDLKRSMLDLIDAGAPDLPLKSEVQEHIMLDDSR
RAACVARARRAFGGLLASLPGEWFDEGWLERVINDAPRHFDEACNRWRQLYTDARAQLNEARRITDDWHRGIGTREIADD
AEQREKEAKRQIDLLCSHERSSSESDFYPYRYFASEGFLPGYNFPRLPVRAFLAHRLGEGVYLARPRFLAIREFGPQNII
YHEGRKYRVTRTTIPAGDASRRFLRAKICRACGYFHEGGDADVCDQCGLLLTGQNTTILPTLFEMSTVIATPADRITCEE
EERVRKGYNLEMFYQFARGPHGARRDTGNVQLETAEGRQEHIALTYAPTATIWQVNHGWKRSNNGFALNVRSGEWGSDPA
DDDDNEADPGQRNEDVRTGVRLVVRDTRNLLVVELPPSLAAQEQVAASLQYALQSGITVAFQLEEQELSSRRLGSGATTR
LIFWEAAEGGAGVLRRLVEEPEALARVARAALELCHYDEHGQERSDVGECVRACYRCLLSYSNQPDHGLLDRRSIRDLLI
DLSRSRVQRQRHDDRDTPEHTALPAVSPAIARVLTAIRDLGGREPDQILPDLDGCRPHLVYRPGYCILCPEAGEDLAPLR
ATLEESGYAVVVIHPNDDVAAVLGSYDFWRM

Sequences:
NA

Specific function: NA

COG id: COG1205

COG function: function code R; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA