Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148653523
Identifier: 148653523
GI number: 148653523
Start: 2135714
End: 2136463
Strand: Direct
Name: 148653523
Synonym: PsycPRwf_1726
Alternate gene names: NA
Gene position: 2135714-2136463 (Clockwise)
Preceding gene: 148653522
Following gene: 148653528
Centisome position: 71.69
GC content: 47.2
Gene sequence:
>750_bases ATGTTAAAGCTACCCCTGCCTAATATTGTGCCTCTAAAAAAACCTGATAAACCTCATAAACTATCCCATAAACTGATGAC CCATGGCGACTCAGAGCGTCCTTTTGTGGTGTTAATCCATGGACTGCATCAAAAAGACTGGATTATGACGCCATTGGCCA AGCAGTTACAAAACCGTGGTTTTGCCACCCATCAGCATAATTATCACAGCCTGCGTGAGCGTATTGATCAGCACAGTAAA CGCTTAAATCAGTGGCTCACTGAGCATCATAATCCTGCCATCGCCATCCATTTGGTCGGACACAGCTTGGGCGGCCTGGT CATTCGAGATTTTGTGGCGCGTTATCCACACTGGAAAATTGGCCGCTGCGTTACCTTAGGCACACCACATAATGGCAGTA CCACCGCCAAATACATGAGTACATTGGCGGCGCCTTTGGTGGGACACTCATTTAAAAATGCATTAGATGGCCAAAGTGCC CCTTGGCCTAAAAGCATAAGCTTAGGCGTGATAGCCGGCGATGCCCCTTATGGCTTAGGGCAACTGGTGCTAAATTATCA CAACCAAAAGGTTAACTTATCACAGCCGCAATCTGCCCACGATGGCACCGTTTATGTGTTTGAGACCCAGCTTAATGAGG CAACAGATCATATTATTATGCCCGTCTCACACACCGGCATGCTCATTAACCCAAAAGTAGCTGAGCAAACGGCCTACTTC TTAGACCATGGCTATTTTAAACGCCGCTAG
Upstream 100 bases:
>100_bases AACAACAAAAAAACCTTCAGGTCCAAGACTTGAAGGTTTTTTTGTATGCAGTGTATTATGATAAGACTCACTCATGAGAT TATATTAACGAGCTTACCTT
Downstream 100 bases:
>100_bases TCATCCTCTTGCATGCTCATACCCGCTTTTAGCGCTTCTTTGTGAGACGTGATAAGTGGAATTAAGGTGCTCATCACCCA TTCATTGCGCCAACCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLKLPLPNIVPLKKPDKPHKLSHKLMTHGDSERPFVVLIHGLHQKDWIMTPLAKQLQNRGFATHQHNYHSLRERIDQHSK RLNQWLTEHHNPAIAIHLVGHSLGGLVIRDFVARYPHWKIGRCVTLGTPHNGSTTAKYMSTLAAPLVGHSFKNALDGQSA PWPKSISLGVIAGDAPYGLGQLVLNYHNQKVNLSQPQSAHDGTVYVFETQLNEATDHIIMPVSHTGMLINPKVAEQTAYF LDHGYFKRR
Sequences:
>Translated_249_residues MLKLPLPNIVPLKKPDKPHKLSHKLMTHGDSERPFVVLIHGLHQKDWIMTPLAKQLQNRGFATHQHNYHSLRERIDQHSK RLNQWLTEHHNPAIAIHLVGHSLGGLVIRDFVARYPHWKIGRCVTLGTPHNGSTTAKYMSTLAAPLVGHSFKNALDGQSA PWPKSISLGVIAGDAPYGLGQLVLNYHNQKVNLSQPQSAHDGTVYVFETQLNEATDHIIMPVSHTGMLINPKVAEQTAYF LDHGYFKRR >Mature_249_residues MLKLPLPNIVPLKKPDKPHKLSHKLMTHGDSERPFVVLIHGLHQKDWIMTPLAKQLQNRGFATHQHNYHSLRERIDQHSK RLNQWLTEHHNPAIAIHLVGHSLGGLVIRDFVARYPHWKIGRCVTLGTPHNGSTTAKYMSTLAAPLVGHSFKNALDGQSA PWPKSISLGVIAGDAPYGLGQLVLNYHNQKVNLSQPQSAHDGTVYVFETQLNEATDHIIMPVSHTGMLINPKVAEQTAYF LDHGYFKRR
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28019; Mature: 28019
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLPLPNIVPLKKPDKPHKLSHKLMTHGDSERPFVVLIHGLHQKDWIMTPLAKQLQNRG CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC FATHQHNYHSLRERIDQHSKRLNQWLTEHHNPAIAIHLVGHSLGGLVIRDFVARYPHWKI CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC GRCVTLGTPHNGSTTAKYMSTLAAPLVGHSFKNALDGQSAPWPKSISLGVIAGDAPYGLG CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHH QLVLNYHNQKVNLSQPQSAHDGTVYVFETQLNEATDHIIMPVSHTGMLINPKVAEQTAYF HHHHHHCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEECCHHHHHHHHH LDHGYFKRR HHCCCCCCC >Mature Secondary Structure MLKLPLPNIVPLKKPDKPHKLSHKLMTHGDSERPFVVLIHGLHQKDWIMTPLAKQLQNRG CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC FATHQHNYHSLRERIDQHSKRLNQWLTEHHNPAIAIHLVGHSLGGLVIRDFVARYPHWKI CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC GRCVTLGTPHNGSTTAKYMSTLAAPLVGHSFKNALDGQSAPWPKSISLGVIAGDAPYGLG CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHH QLVLNYHNQKVNLSQPQSAHDGTVYVFETQLNEATDHIIMPVSHTGMLINPKVAEQTAYF HHHHHHCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEECCHHHHHHHHH LDHGYFKRR HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA