Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is paaY [C]
Identifier: 148652645
GI number: 148652645
Start: 992960
End: 993496
Strand: Direct
Name: paaY [C]
Synonym: PsycPRwf_0836
Alternate gene names: 148652645
Gene position: 992960-993496 (Clockwise)
Preceding gene: 148652636
Following gene: 148652646
Centisome position: 33.33
GC content: 46.37
Gene sequence:
>537_bases ATGATTTATAAATTTTTGGACAAAGCCCCGCAGTTTGCCACCCCTTTTCAAGGCTGGGTTGCCGATAGCGCCCGCGTGAT TGGGGATGTGTATTTAGGCCATCAAGCCAGCGTTTGGTTTGGTGCGGTAATCCGTGGTGATAATGAGCGCATTCATATTG GTGATTACAGTAATGTGCAAGAAAATGCGGTGATTCACACGGATGCTGGCATACAGGTCACTATCGGTGAGTATGTCACC ATAGGGCACTTGGCCATGTTGCATGGTTGCACAGTTGGCGATAATAGCTTAATTGGCATCGGCGCTGTGGTATTAAACAA TGCCAAAATTGGTAAAAACTGTATTATTGGTGCCAAGGCCTTGGTGACTGAAGGCAAGGAGATTCCTGACAACTCATTGG TGATGGGCGCGCCGGCCAAAGTGGTTAAAACCTTAACTGAAGAGCAGGTGGCTTTTTTAAAAATGTCAGCGCTGCACTAT GCAAAAAAGTGTCAACAATTTAAAGCAGGCTTAGAGCCAGTGAGCGCACCTGAATAA
Upstream 100 bases:
>100_bases CGTTAAAAATATATGTAATTAATGCTAGCCTAGTCAGAGAACTGACATCAAGGTAGGGTCAGCAATAACCGCAAACAAAT AACTTAAAAGGATGTCACCG
Downstream 100 bases:
>100_bases TGAAATGAGCATAAATACCACACATCAAAACGACGCTAAACACAACATATAAAACGATGGGCAGCTTTTACAGTGTTTAA GTATGGCCCATCCACTTATG
Product: carbonic anhydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MIYKFLDKAPQFATPFQGWVADSARVIGDVYLGHQASVWFGAVIRGDNERIHIGDYSNVQENAVIHTDAGIQVTIGEYVT IGHLAMLHGCTVGDNSLIGIGAVVLNNAKIGKNCIIGAKALVTEGKEIPDNSLVMGAPAKVVKTLTEEQVAFLKMSALHY AKKCQQFKAGLEPVSAPE
Sequences:
>Translated_178_residues MIYKFLDKAPQFATPFQGWVADSARVIGDVYLGHQASVWFGAVIRGDNERIHIGDYSNVQENAVIHTDAGIQVTIGEYVT IGHLAMLHGCTVGDNSLIGIGAVVLNNAKIGKNCIIGAKALVTEGKEIPDNSLVMGAPAKVVKTLTEEQVAFLKMSALHY AKKCQQFKAGLEPVSAPE >Mature_178_residues MIYKFLDKAPQFATPFQGWVADSARVIGDVYLGHQASVWFGAVIRGDNERIHIGDYSNVQENAVIHTDAGIQVTIGEYVT IGHLAMLHGCTVGDNSLIGIGAVVLNNAKIGKNCIIGAKALVTEGKEIPDNSLVMGAPAKVVKTLTEEQVAFLKMSALHY AKKCQQFKAGLEPVSAPE
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1787667, Length=167, Percent_Identity=38.9221556886228, Blast_Score=118, Evalue=2e-28, Organism=Escherichia coli, GI87082240, Length=174, Percent_Identity=35.0574712643678, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI87081681, Length=144, Percent_Identity=32.6388888888889, Blast_Score=87, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19063; Mature: 19063
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYKFLDKAPQFATPFQGWVADSARVIGDVYLGHQASVWFGAVIRGDNERIHIGDYSNVQ CCCCHHHCCCCCCCCCCHHHCCCHHHHHHHEECCCCCEEEEEEEECCCCEEEECCCCCCC ENAVIHTDAGIQVTIGEYVTIGHLAMLHGCTVGDNSLIGIGAVVLNNAKIGKNCIIGAKA CCEEEEECCCEEEEECCEEHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCEEECCHH LVTEGKEIPDNSLVMGAPAKVVKTLTEEQVAFLKMSALHYAKKCQQFKAGLEPVSAPE HHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIYKFLDKAPQFATPFQGWVADSARVIGDVYLGHQASVWFGAVIRGDNERIHIGDYSNVQ CCCCHHHCCCCCCCCCCHHHCCCHHHHHHHEECCCCCEEEEEEEECCCCEEEECCCCCCC ENAVIHTDAGIQVTIGEYVTIGHLAMLHGCTVGDNSLIGIGAVVLNNAKIGKNCIIGAKA CCEEEEECCCEEEEECCEEHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCEEECCHH LVTEGKEIPDNSLVMGAPAKVVKTLTEEQVAFLKMSALHYAKKCQQFKAGLEPVSAPE HHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]