Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is pcaK [H]
Identifier: 148652550
GI number: 148652550
Start: 882443
End: 883759
Strand: Direct
Name: pcaK [H]
Synonym: PsycPRwf_0741
Alternate gene names: 148652550
Gene position: 882443-883759 (Clockwise)
Preceding gene: 148652549
Following gene: 148652551
Centisome position: 29.62
GC content: 40.85
Gene sequence:
>1317_bases ATGAAATCAATCGTATTAAAGGATTTTATTGATAGTCGAGCGCTTGGCAATCGTCAGAAGTCTATTATAGCCCTATGTAT GGCCCTAATGATTTTGGACGGTTATGATATACAAGCGATGGCTTATGCCGCCCCTCTAATTATTAGTGATTGGCAAATTG ACAAAACCATGTTGGGTGTGGTGTTCAGCTCAAGCTTGGTTGGTTTGTTCTTTGGTTCATTGTTGATTAGTAATTTGTCA GATCGCTTTGGGCGTCGTATCATTTTGCTAATCTCAACCTTACTGTTTTCGATATTTATGTTAGTCACGCCAATGGCTCA TAACCTAGAGCAATTGGCGATTTTGCGTTTTGTGACGGGTATTTTTTTGGGCGGTATTATGCCCAATGCTATGGCATATT GTGCTGAGATTGTGCCAAGCAAATACCGTGTGTTTACAATGATTATGATCTCATCAGGCTTTACCATTGGTGCAATGCTA GGTGGTTTTGTGGCAACGTGGTTAAAGGCTTATGGGTGGCAAGCAATCTTTTATTTTGGTGGTATCGTCCCCTTAATTTT GTTTGTGATCATGTTTCTGGCCTTGCCCGAGTCGTTACAATTCTTGGCCTCAAAGCCCAATAATGAGAGCAAGATAAAGT CAATATTACAGCGCTTTTATCCCAGTGCTACTATATCTAATGACACCACTATCATATTACCTAAGAATGAAACGGTTAAA GCCTCACCAATAGAATTATTTAAAGAAAATCGCAGCTTTTTTACCATCACTATCTGGATTGCCAGTATGATGAACTTGAT GAGCTTGTACTTTTTATCAAGTTGGCTACCGACACTGGGTATGGAGGCAGGACTTACCACCACTCAAGCGTTAATGATAG GCTCAACGTTACAATTTGGCGGTACAGTGGGTAGTTTATTGATGGGAACACGCATCAATAAGCTGGGCTTTTATAAAGTA TTAATTCCCATCTTTATAGTGGCTGCTCTTAGTGTTGCAATGATTGGCTTTAGTGCAGGCAGTATTGTAGTGCTATTTAT TGTGGTGTTTATTGCAGGGTTCACGGTTGTCGGTGGACAACCTACACTTAATGCGTTGTCTGCTGAACGCTATCCTACCT TGCTACGTACAACAGGTGTTGGCTGGAGCTTGGGAATTGGTAGAATTGGATCGATGATAGGCCCGGTTATTGGCGGCTTG CTCTCAAAATCTTTAACATTAAGTACACTGTTTTTATTTGCAGCAGTGCCTTCAATTGTGGTAGTTATAATGATGATAAT GCAAGCAAGACACCCTGGTAGTAAGTCTGAGCTTTAG
Upstream 100 bases:
>100_bases ATTTCTAACTCACTATCTATAGGTTTATTGATGTTGCTCGTTGATAGTAGATGAGTGCTTTGAAAAGTATTTTAAAGTAG GTGTTAAACAAGGATGTTAC
Downstream 100 bases:
>100_bases TAACTTAATCTCAGATACAATCTCAGATACGATCTCAGTTACGTTTAAATAAAAAGCTAAGACCATAGGGTATTAACGAA CAATAATCTAACAAGGAACT
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKSIVLKDFIDSRALGNRQKSIIALCMALMILDGYDIQAMAYAAPLIISDWQIDKTMLGVVFSSSLVGLFFGSLLISNLS DRFGRRIILLISTLLFSIFMLVTPMAHNLEQLAILRFVTGIFLGGIMPNAMAYCAEIVPSKYRVFTMIMISSGFTIGAML GGFVATWLKAYGWQAIFYFGGIVPLILFVIMFLALPESLQFLASKPNNESKIKSILQRFYPSATISNDTTIILPKNETVK ASPIELFKENRSFFTITIWIASMMNLMSLYFLSSWLPTLGMEAGLTTTQALMIGSTLQFGGTVGSLLMGTRINKLGFYKV LIPIFIVAALSVAMIGFSAGSIVVLFIVVFIAGFTVVGGQPTLNALSAERYPTLLRTTGVGWSLGIGRIGSMIGPVIGGL LSKSLTLSTLFLFAAVPSIVVVIMMIMQARHPGSKSEL
Sequences:
>Translated_438_residues MKSIVLKDFIDSRALGNRQKSIIALCMALMILDGYDIQAMAYAAPLIISDWQIDKTMLGVVFSSSLVGLFFGSLLISNLS DRFGRRIILLISTLLFSIFMLVTPMAHNLEQLAILRFVTGIFLGGIMPNAMAYCAEIVPSKYRVFTMIMISSGFTIGAML GGFVATWLKAYGWQAIFYFGGIVPLILFVIMFLALPESLQFLASKPNNESKIKSILQRFYPSATISNDTTIILPKNETVK ASPIELFKENRSFFTITIWIASMMNLMSLYFLSSWLPTLGMEAGLTTTQALMIGSTLQFGGTVGSLLMGTRINKLGFYKV LIPIFIVAALSVAMIGFSAGSIVVLFIVVFIAGFTVVGGQPTLNALSAERYPTLLRTTGVGWSLGIGRIGSMIGPVIGGL LSKSLTLSTLFLFAAVPSIVVVIMMIMQARHPGSKSEL >Mature_438_residues MKSIVLKDFIDSRALGNRQKSIIALCMALMILDGYDIQAMAYAAPLIISDWQIDKTMLGVVFSSSLVGLFFGSLLISNLS DRFGRRIILLISTLLFSIFMLVTPMAHNLEQLAILRFVTGIFLGGIMPNAMAYCAEIVPSKYRVFTMIMISSGFTIGAML GGFVATWLKAYGWQAIFYFGGIVPLILFVIMFLALPESLQFLASKPNNESKIKSILQRFYPSATISNDTTIILPKNETVK ASPIELFKENRSFFTITIWIASMMNLMSLYFLSSWLPTLGMEAGLTTTQALMIGSTLQFGGTVGSLLMGTRINKLGFYKV LIPIFIVAALSVAMIGFSAGSIVVLFIVVFIAGFTVVGGQPTLNALSAERYPTLLRTTGVGWSLGIGRIGSMIGPVIGGL LSKSLTLSTLFLFAAVPSIVVVIMMIMQARHPGSKSEL
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=439, Percent_Identity=22.3234624145786, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI166064021, Length=403, Percent_Identity=23.8213399503722, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI213021148, Length=456, Percent_Identity=22.1491228070175, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87081723, Length=401, Percent_Identity=29.925187032419, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI87082159, Length=399, Percent_Identity=25.8145363408521, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786229, Length=370, Percent_Identity=24.0540540540541, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI87082404, Length=389, Percent_Identity=21.8508997429306, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87082231, Length=441, Percent_Identity=21.5419501133787, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789312, Length=443, Percent_Identity=25.0564334085779, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788068, Length=379, Percent_Identity=24.2744063324538, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI32564663, Length=437, Percent_Identity=22.4256292906178, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI193207197, Length=438, Percent_Identity=23.5159817351598, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71980582, Length=361, Percent_Identity=24.0997229916898, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71980584, Length=361, Percent_Identity=24.0997229916898, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922616, Length=388, Percent_Identity=23.7113402061856, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI19922874, Length=402, Percent_Identity=21.6417910447761, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24649618, Length=361, Percent_Identity=22.1606648199446, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47649; Mature: 47649
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIVLKDFIDSRALGNRQKSIIALCMALMILDGYDIQAMAYAAPLIISDWQIDKTMLGV CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHEECCCHHHHHHHH VFSSSLVGLFFGSLLISNLSDRFGRRIILLISTLLFSIFMLVTPMAHNLEQLAILRFVTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLGGIMPNAMAYCAEIVPSKYRVFTMIMISSGFTIGAMLGGFVATWLKAYGWQAIFYFG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH GIVPLILFVIMFLALPESLQFLASKPNNESKIKSILQRFYPSATISNDTTIILPKNETVK HHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC ASPIELFKENRSFFTITIWIASMMNLMSLYFLSSWLPTLGMEAGLTTTQALMIGSTLQFG CCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHC GTVGSLLMGTRINKLGFYKVLIPIFIVAALSVAMIGFSAGSIVVLFIVVFIAGFTVVGGQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCC PTLNALSAERYPTLLRTTGVGWSLGIGRIGSMIGPVIGGLLSKSLTLSTLFLFAAVPSIV CCHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIMMIMQARHPGSKSEL HHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKSIVLKDFIDSRALGNRQKSIIALCMALMILDGYDIQAMAYAAPLIISDWQIDKTMLGV CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHEECCCHHHHHHHH VFSSSLVGLFFGSLLISNLSDRFGRRIILLISTLLFSIFMLVTPMAHNLEQLAILRFVTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLGGIMPNAMAYCAEIVPSKYRVFTMIMISSGFTIGAMLGGFVATWLKAYGWQAIFYFG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH GIVPLILFVIMFLALPESLQFLASKPNNESKIKSILQRFYPSATISNDTTIILPKNETVK HHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC ASPIELFKENRSFFTITIWIASMMNLMSLYFLSSWLPTLGMEAGLTTTQALMIGSTLQFG CCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHC GTVGSLLMGTRINKLGFYKVLIPIFIVAALSVAMIGFSAGSIVVLFIVVFIAGFTVVGGQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCC PTLNALSAERYPTLLRTTGVGWSLGIGRIGSMIGPVIGGLLSKSLTLSTLFLFAAVPSIV CCHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIMMIMQARHPGSKSEL HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]