Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652528
Identifier: 148652528
GI number: 148652528
Start: 858664
End: 859953
Strand: Direct
Name: 148652528
Synonym: PsycPRwf_0717
Alternate gene names: NA
Gene position: 858664-859953 (Clockwise)
Preceding gene: 148652527
Following gene: 148652529
Centisome position: 28.82
GC content: 47.6
Gene sequence:
>1290_bases ATGGAACACCCAACTAATAACAACGAAAAAAATGACGGTCTTGCAAATCGACTTAACCAAGAGTGCTACTGCATTACCCT TGATCGTAAAGCGCTTAATACAAGCCTTCAAGATCAATTGGTAGAAACTAGAAACAATCCAATAGGAGCGAACGAGCTTA ATAAGCTTTTTTCAGCAACACCCGTGTTCGTTCCCAAAACAGAGATAGAGGCGATGGAGCGAATCGTCAGGGCTATCGAG TCAGCTGCCGAACTGCCATTGTATCAAGAGCAAGTGCTGTCGTGGGCACCAGAAATAGCTGCTTTCGACCCAGGCCCAAT AGGGGCCCTCATGGGTTATGACTTTCACTTGGGTAGCGATGGACCTCAGCTCATCGAGGTCAATACTAATGCCGGTGGCG CATTTCTGAATGTGTTGCTCGCTCGCGCACAAAAACGCTGTTGCAACCCCTCAGAGCAAAGCGCTGCAACCAATCAAATG CTAGATAGGTTCGAGGAAGCAGTGTTTGACATGTTCAAACAGGAGTGGCAGCGACAGTCCGCTGTTGCTATGCCCAATCG GATAGCCATTGTGGACAATGACCCCGAGAGTCAGTTCATGTTCTTAGAGTTTGAGTTAGCCTGTCAACTGCTCCAAGCTA GAGGTATTGATACTGTGATACTTGATCCCTCTGAACTCGAGTATATCGACGGTACGTTAACAGCCCATGGCCAGAAAATC GATATGATTTACAATCGGCTTGTCGACTTTGCATTTGAGGACCCTGACCATGTATTGCTTAAGCAGGCTTATTTAGAGGG TGCTGTGGTAGTGACACCCAATCCCCGCGTACATGCTATGTTGGCCAATAAGCAAAACCTGACATTGCTATCAGACTCCC AAATATTGCGCTCTTGGGGTCTGGATGAGGCTGCAGTGGAGTGCCTCGAAAGGTCTGTACCGAGGACTAAGATTGTATCA AGAGACGATGCAGCAGAGTTGTGGCTTACTCGGCGGCAACTGTTTTTTAAGCCAGTTACTGGTCATGGAAGCAAAGGCGT TTATCGCGGTAGCAAACTGACTCGACGCGTCTTCGAAAACATTCTGGATGAAGATTATATCGCACAGACCTTTGTCCCTG CAGGAGAGAGATCACTCAAAATTGATGACATCGTAACAACAAGAAAGGTAGATATACGTCTTTATACGTATGGCGGAAAA CTGTTACTACCTGCTGCGCGTGTGTATCAAGGTCAGGTGACTAACTTCCGTACGCCAGGCGGTGGATTCGCGCCTGTCTT TCAGGTGTGA
Upstream 100 bases:
>100_bases AAGTAGCTAGCACTACTTAAACACGCCAAGAACCTTTTTTACTTTTTACTTTTTACTAGAGTATGTCAGCGTGAGTACTC TACTTAGCGACGGACTCTAA
Downstream 100 bases:
>100_bases TCGTCTAGGTCTTATTTAGATGGCATTAGGCTGTTATAAGTCCGGTTAACTAATTCAATATTCTTCTTACCTAACAAAAG ATGGTTGTATATTTATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MEHPTNNNEKNDGLANRLNQECYCITLDRKALNTSLQDQLVETRNNPIGANELNKLFSATPVFVPKTEIEAMERIVRAIE SAAELPLYQEQVLSWAPEIAAFDPGPIGALMGYDFHLGSDGPQLIEVNTNAGGAFLNVLLARAQKRCCNPSEQSAATNQM LDRFEEAVFDMFKQEWQRQSAVAMPNRIAIVDNDPESQFMFLEFELACQLLQARGIDTVILDPSELEYIDGTLTAHGQKI DMIYNRLVDFAFEDPDHVLLKQAYLEGAVVVTPNPRVHAMLANKQNLTLLSDSQILRSWGLDEAAVECLERSVPRTKIVS RDDAAELWLTRRQLFFKPVTGHGSKGVYRGSKLTRRVFENILDEDYIAQTFVPAGERSLKIDDIVTTRKVDIRLYTYGGK LLLPAARVYQGQVTNFRTPGGGFAPVFQV
Sequences:
>Translated_429_residues MEHPTNNNEKNDGLANRLNQECYCITLDRKALNTSLQDQLVETRNNPIGANELNKLFSATPVFVPKTEIEAMERIVRAIE SAAELPLYQEQVLSWAPEIAAFDPGPIGALMGYDFHLGSDGPQLIEVNTNAGGAFLNVLLARAQKRCCNPSEQSAATNQM LDRFEEAVFDMFKQEWQRQSAVAMPNRIAIVDNDPESQFMFLEFELACQLLQARGIDTVILDPSELEYIDGTLTAHGQKI DMIYNRLVDFAFEDPDHVLLKQAYLEGAVVVTPNPRVHAMLANKQNLTLLSDSQILRSWGLDEAAVECLERSVPRTKIVS RDDAAELWLTRRQLFFKPVTGHGSKGVYRGSKLTRRVFENILDEDYIAQTFVPAGERSLKIDDIVTTRKVDIRLYTYGGK LLLPAARVYQGQVTNFRTPGGGFAPVFQV >Mature_429_residues MEHPTNNNEKNDGLANRLNQECYCITLDRKALNTSLQDQLVETRNNPIGANELNKLFSATPVFVPKTEIEAMERIVRAIE SAAELPLYQEQVLSWAPEIAAFDPGPIGALMGYDFHLGSDGPQLIEVNTNAGGAFLNVLLARAQKRCCNPSEQSAATNQM LDRFEEAVFDMFKQEWQRQSAVAMPNRIAIVDNDPESQFMFLEFELACQLLQARGIDTVILDPSELEYIDGTLTAHGQKI DMIYNRLVDFAFEDPDHVLLKQAYLEGAVVVTPNPRVHAMLANKQNLTLLSDSQILRSWGLDEAAVECLERSVPRTKIVS RDDAAELWLTRRQLFFKPVTGHGSKGVYRGSKLTRRVFENILDEDYIAQTFVPAGERSLKIDDIVTTRKVDIRLYTYGGK LLLPAARVYQGQVTNFRTPGGGFAPVFQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48097; Mature: 48097
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHPTNNNEKNDGLANRLNQECYCITLDRKALNTSLQDQLVETRNNPIGANELNKLFSAT CCCCCCCCCCCCCHHHHCCCCEEEEEECHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCC PVFVPKTEIEAMERIVRAIESAAELPLYQEQVLSWAPEIAAFDPGPIGALMGYDFHLGSD CCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCC GPQLIEVNTNAGGAFLNVLLARAQKRCCNPSEQSAATNQMLDRFEEAVFDMFKQEWQRQS CCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAMPNRIAIVDNDPESQFMFLEFELACQLLQARGIDTVILDPSELEYIDGTLTAHGQKI HHCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCEEEECCCHHHEECCEEECCCCHH DMIYNRLVDFAFEDPDHVLLKQAYLEGAVVVTPNPRVHAMLANKQNLTLLSDSQILRSWG HHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCEEEEEECCCCEEEECHHHHHHHCC LDEAAVECLERSVPRTKIVSRDDAAELWLTRRQLFFKPVTGHGSKGVYRGSKLTRRVFEN CCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHH ILDEDYIAQTFVPAGERSLKIDDIVTTRKVDIRLYTYGGKLLLPAARVYQGQVTNFRTPG HHCHHHHHHHCCCCCCCCEEEHHEEEEEEEEEEEEEECCEEEECHHHHHCCCCCCEECCC GGFAPVFQV CCCCCCCCC >Mature Secondary Structure MEHPTNNNEKNDGLANRLNQECYCITLDRKALNTSLQDQLVETRNNPIGANELNKLFSAT CCCCCCCCCCCCCHHHHCCCCEEEEEECHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCC PVFVPKTEIEAMERIVRAIESAAELPLYQEQVLSWAPEIAAFDPGPIGALMGYDFHLGSD CCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCC GPQLIEVNTNAGGAFLNVLLARAQKRCCNPSEQSAATNQMLDRFEEAVFDMFKQEWQRQS CCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAMPNRIAIVDNDPESQFMFLEFELACQLLQARGIDTVILDPSELEYIDGTLTAHGQKI HHCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCEEEECCCHHHEECCEEECCCCHH DMIYNRLVDFAFEDPDHVLLKQAYLEGAVVVTPNPRVHAMLANKQNLTLLSDSQILRSWG HHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCEEEEEECCCCEEEECHHHHHHHCC LDEAAVECLERSVPRTKIVSRDDAAELWLTRRQLFFKPVTGHGSKGVYRGSKLTRRVFEN CCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHH ILDEDYIAQTFVPAGERSLKIDDIVTTRKVDIRLYTYGGKLLLPAARVYQGQVTNFRTPG HHCHHHHHHHCCCCCCCCEEEHHEEEEEEEEEEEEEECCEEEECHHHHHCCCCCCEECCC GGFAPVFQV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA