Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652512
Identifier: 148652512
GI number: 148652512
Start: 842604
End: 843245
Strand: Direct
Name: 148652512
Synonym: PsycPRwf_0701
Alternate gene names: NA
Gene position: 842604-843245 (Clockwise)
Preceding gene: 148652511
Following gene: 148652517
Centisome position: 28.29
GC content: 37.23
Gene sequence:
>642_bases ATGCGCTATGGCATGAATAGCATTTGGTTCTTATTACAGCAAAATGCTTTAGGCATAGCTTTAAAGCAGGCTGCAATAAT GGTTAATATTGATTTACACGACGCAGATATCATTATAAATCGAGCGCGAAAAGTAGCCAATGTGACCTCGAGCCATGATA ACCCTAGATTCATTGGAACAAATGGCCTTCCAAAAAGTATTCAGTACAAAAGTGATTATAGATTACTGTCTTCACTGCAA AGCAGTGCTCAAAAACTACGAGATAACTCATTAGATGATTGGCAGTGGTTTATAGCTCTATGCCAAGAGCATCTATCTTA CAGTAAGGCGTTTGTTCCTTTTTCAATCAAAGAAAAGAAAGCGTTACGACGTTTTATCAAAATTGCCAAACAATTACTGC CAGCGAAAAATTGGCTAGTTGCTCATCCTGCGGCATCACAAGTCCATCTTAATTTAGCTGATATGAAGGGATTGCGTAGC ATCAGTAAAGATAGTATGGGTACGTTCAACATTGGAATCGCTTTGATTGATAACAGATCCTCTGTAAATGATAAATGGCA ATTTTCTCCGTTGCTGCGATTTTTTGTTTATATGGTATTGATTACGGATGAAGAGTTAGTGATTTTAGATAATGCGTCAT AA
Upstream 100 bases:
>100_bases GGTATGTTTAATTTAGCCTACTTTTTGAACCACCACCCGCTTATGTATTAAAAACACGACCCTTTTAGTCGATTCACAAA GTAGGACAGAAACGTTATTT
Downstream 100 bases:
>100_bases GTTATTTAAGTTTGCTTCGGTGTTCGACAGCGACGCCTAGAATTTAAAAATCAGTGAATCTACTATCAATAATGGGGTAA CCCCAGTTCGGGATAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRYGMNSIWFLLQQNALGIALKQAAIMVNIDLHDADIIINRARKVANVTSSHDNPRFIGTNGLPKSIQYKSDYRLLSSLQ SSAQKLRDNSLDDWQWFIALCQEHLSYSKAFVPFSIKEKKALRRFIKIAKQLLPAKNWLVAHPAASQVHLNLADMKGLRS ISKDSMGTFNIGIALIDNRSSVNDKWQFSPLLRFFVYMVLITDEELVILDNAS
Sequences:
>Translated_213_residues MRYGMNSIWFLLQQNALGIALKQAAIMVNIDLHDADIIINRARKVANVTSSHDNPRFIGTNGLPKSIQYKSDYRLLSSLQ SSAQKLRDNSLDDWQWFIALCQEHLSYSKAFVPFSIKEKKALRRFIKIAKQLLPAKNWLVAHPAASQVHLNLADMKGLRS ISKDSMGTFNIGIALIDNRSSVNDKWQFSPLLRFFVYMVLITDEELVILDNAS >Mature_213_residues MRYGMNSIWFLLQQNALGIALKQAAIMVNIDLHDADIIINRARKVANVTSSHDNPRFIGTNGLPKSIQYKSDYRLLSSLQ SSAQKLRDNSLDDWQWFIALCQEHLSYSKAFVPFSIKEKKALRRFIKIAKQLLPAKNWLVAHPAASQVHLNLADMKGLRS ISKDSMGTFNIGIALIDNRSSVNDKWQFSPLLRFFVYMVLITDEELVILDNAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24237; Mature: 24237
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYGMNSIWFLLQQNALGIALKQAAIMVNIDLHDADIIINRARKVANVTSSHDNPRFIGT CCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEC NGLPKSIQYKSDYRLLSSLQSSAQKLRDNSLDDWQWFIALCQEHLSYSKAFVPFSIKEKK CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHH ALRRFIKIAKQLLPAKNWLVAHPAASQVHLNLADMKGLRSISKDSMGTFNIGIALIDNRS HHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEEEECCC SVNDKWQFSPLLRFFVYMVLITDEELVILDNAS CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure MRYGMNSIWFLLQQNALGIALKQAAIMVNIDLHDADIIINRARKVANVTSSHDNPRFIGT CCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEC NGLPKSIQYKSDYRLLSSLQSSAQKLRDNSLDDWQWFIALCQEHLSYSKAFVPFSIKEKK CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHH ALRRFIKIAKQLLPAKNWLVAHPAASQVHLNLADMKGLRSISKDSMGTFNIGIALIDNRS HHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEEEECCC SVNDKWQFSPLLRFFVYMVLITDEELVILDNAS CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA