Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652136
Identifier: 148652136
GI number: 148652136
Start: 388609
End: 389718
Strand: Direct
Name: 148652136
Synonym: PsycPRwf_0324
Alternate gene names: NA
Gene position: 388609-389718 (Clockwise)
Preceding gene: 148652134
Following gene: 148652139
Centisome position: 13.05
GC content: 44.05
Gene sequence:
>1110_bases ATGTCAAAAAAAAGTAATAAGTCTGAGAAAATTAGCGACGCTTATGTGACCAATCCCAAAAAGATTGAAAAGTATGAAAC CCAAAAGAAAAAAGACAGCTCACGTATAAAGACCAAAGAAGTTATTGATCAGGTACTGCTAAAACAACTAGCAGAGGGCA ATATCGAGGCGATATCAGATCGTATTCAATCGCTCATTCATGATGCTTCTCCAGATGACCTAGAAAAGCTAAAAAATCTA TTTGCCAATCATGCGTTGGCCAATGCTGTCAAAACAGGCACCAAAAGAGACGATGAGTTATCGGATAACTGGCGTGAAGG CGGCTATCCTTATAAAAACCGCTTATCGCGTAAAAACTATGAAAAACAAAAGTATCACCTGCAAGTTGAGCTCTTAAAGC TACAAAAATGGGTGCGTGAAAATGACAAAAAAGTGGTCATTATCTTCGAGGGGCGTGATGCGGCCGGTAAAGGCGGCTCT ATCAAGCGCTTTATGGAGCATTTAAACCCTCGTAGCTCACGAGTTGTGGCACTAGAAAAACCCACCGAGCGTGAGATGGG GCAGTGGTACTTCCAGCGCTATGTGCAGCATTTGCCCTCAGCTGGAGAGATGGTGTTCTTCGACCGCTCATGGTACAACC GCGCTGGCGTTGAGCGGGTAATGGGCTTTTGTACGGAAGAAGAGTACGCTACTTTTATGCGCCAAACTCCTGAGTTTGAG AAACACTTAATTGACTCGGGCATTCATTTAATCAAGTTTTGGTTCTCAGTGAGCCGTGATGAGCAGCGTCGCCGATTTGC TCAGCGTGAAGCGCATCCCTTAAAGCAGTGGAAGTTATCTCCCATTGATTTGGCTTCACTGGATAAATGGGATGAATACA CTTTGGCTAAAGAAGCCATGTTCTATAATACTGACACCGCAGAATCCCCTTGGATTGTCATCAAGTCAGATTGTAAAAAA CGTGCCCGTCTTAATGCCATGCGCTATGTGTTAAATAGACTTCCCTACGATGGCAGAGACAAGAGTCAGGTGGGGAATGT TGATCCGCTTATTGTCGGTCGTGCAGGTGCATTATATGAATTGGGAGAAAAATCGGACCTAGAGATTTAA
Upstream 100 bases:
>100_bases ATGAGTAGTAGGATTTGATAATAGCCACTATAAATACTTGCTATAATAATTAAATAAAACTATGTAATGTTTTTTTTAAA GCTAACAGCAAGGGGCGACT
Downstream 100 bases:
>100_bases CACAAATTGGTAGAAGTCCCACCACCTTACAGGTGGTGGGATGAAGGCCATAAGATAAATATGATAAATACGATAAAAGA TTAAATTCGCCCGTATCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSKKSNKSEKISDAYVTNPKKIEKYETQKKKDSSRIKTKEVIDQVLLKQLAEGNIEAISDRIQSLIHDASPDDLEKLKNL FANHALANAVKTGTKRDDELSDNWREGGYPYKNRLSRKNYEKQKYHLQVELLKLQKWVRENDKKVVIIFEGRDAAGKGGS IKRFMEHLNPRSSRVVALEKPTEREMGQWYFQRYVQHLPSAGEMVFFDRSWYNRAGVERVMGFCTEEEYATFMRQTPEFE KHLIDSGIHLIKFWFSVSRDEQRRRFAQREAHPLKQWKLSPIDLASLDKWDEYTLAKEAMFYNTDTAESPWIVIKSDCKK RARLNAMRYVLNRLPYDGRDKSQVGNVDPLIVGRAGALYELGEKSDLEI
Sequences:
>Translated_369_residues MSKKSNKSEKISDAYVTNPKKIEKYETQKKKDSSRIKTKEVIDQVLLKQLAEGNIEAISDRIQSLIHDASPDDLEKLKNL FANHALANAVKTGTKRDDELSDNWREGGYPYKNRLSRKNYEKQKYHLQVELLKLQKWVRENDKKVVIIFEGRDAAGKGGS IKRFMEHLNPRSSRVVALEKPTEREMGQWYFQRYVQHLPSAGEMVFFDRSWYNRAGVERVMGFCTEEEYATFMRQTPEFE KHLIDSGIHLIKFWFSVSRDEQRRRFAQREAHPLKQWKLSPIDLASLDKWDEYTLAKEAMFYNTDTAESPWIVIKSDCKK RARLNAMRYVLNRLPYDGRDKSQVGNVDPLIVGRAGALYELGEKSDLEI >Mature_368_residues SKKSNKSEKISDAYVTNPKKIEKYETQKKKDSSRIKTKEVIDQVLLKQLAEGNIEAISDRIQSLIHDASPDDLEKLKNLF ANHALANAVKTGTKRDDELSDNWREGGYPYKNRLSRKNYEKQKYHLQVELLKLQKWVRENDKKVVIIFEGRDAAGKGGSI KRFMEHLNPRSSRVVALEKPTEREMGQWYFQRYVQHLPSAGEMVFFDRSWYNRAGVERVMGFCTEEEYATFMRQTPEFEK HLIDSGIHLIKFWFSVSRDEQRRRFAQREAHPLKQWKLSPIDLASLDKWDEYTLAKEAMFYNTDTAESPWIVIKSDCKKR ARLNAMRYVLNRLPYDGRDKSQVGNVDPLIVGRAGALYELGEKSDLEI
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 43165; Mature: 43033
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKSNKSEKISDAYVTNPKKIEKYETQKKKDSSRIKTKEVIDQVLLKQLAEGNIEAISD CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RIQSLIHDASPDDLEKLKNLFANHALANAVKTGTKRDDELSDNWREGGYPYKNRLSRKNY HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHCCC EKQKYHLQVELLKLQKWVRENDKKVVIIFEGRDAAGKGGSIKRFMEHLNPRSSRVVALEK HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEECC PTEREMGQWYFQRYVQHLPSAGEMVFFDRSWYNRAGVERVMGFCTEEEYATFMRQTPEFE CCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH KHLIDSGIHLIKFWFSVSRDEQRRRFAQREAHPLKQWKLSPIDLASLDKWDEYTLAKEAM HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCCHHHHHHHHHH FYNTDTAESPWIVIKSDCKKRARLNAMRYVLNRLPYDGRDKSQVGNVDPLIVGRAGALYE EECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCHHH LGEKSDLEI CCCCCCCCC >Mature Secondary Structure SKKSNKSEKISDAYVTNPKKIEKYETQKKKDSSRIKTKEVIDQVLLKQLAEGNIEAISD CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RIQSLIHDASPDDLEKLKNLFANHALANAVKTGTKRDDELSDNWREGGYPYKNRLSRKNY HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHCCC EKQKYHLQVELLKLQKWVRENDKKVVIIFEGRDAAGKGGSIKRFMEHLNPRSSRVVALEK HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEECC PTEREMGQWYFQRYVQHLPSAGEMVFFDRSWYNRAGVERVMGFCTEEEYATFMRQTPEFE CCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH KHLIDSGIHLIKFWFSVSRDEQRRRFAQREAHPLKQWKLSPIDLASLDKWDEYTLAKEAM HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCCHHHHHHHHHH FYNTDTAESPWIVIKSDCKKRARLNAMRYVLNRLPYDGRDKSQVGNVDPLIVGRAGALYE EECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCHHH LGEKSDLEI CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]