Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is murI [H]
Identifier: 148652096
GI number: 148652096
Start: 338477
End: 339499
Strand: Direct
Name: murI [H]
Synonym: PsycPRwf_0284
Alternate gene names: 148652096
Gene position: 338477-339499 (Clockwise)
Preceding gene: 148652095
Following gene: 148652097
Centisome position: 11.36
GC content: 51.52
Gene sequence:
>1023_bases ATGACAACTCAAGCTGTAGCTATCAACCAATCCCAAGATGCCAGTCAAAAAGCGGCTGCCGATGACGATAAGGCGCAGAT GCCGCCTTCTGTTAGTGGCCCCGCGCCCATAGGGATCTTTGACTCTGGTGTGGGCGGTTTGTCGGTGTATATGCACCTGA AGCAGGCACTGCCCCAAGAGCATTTTATTTATTATGCCGACACCTTAAATGTGCCTTATGGGCCTCGGCCAAGCAGTGAA ATTCAGCAGCTAAGCCTGACGGCAGTTGACTGGCTGGTGGCTGCAGGCTGTAAGCTGGTAGTGATTGCTTGCAACAGTGC GTCGGCGCATGCGCTGCATTTGGCACGGCAAAAATACCCGCACATACCTATTGTCGGGTTGGTCCCCGCACTTAAGCCTG CCGTATTAAATAGTACCAGCAAAAATGTGGCGGTACTGGCCACCAAGGCTACCTTGGATGGGCCGCTATTAAATACAGTT ATTGATGAGTATGCGCGGCCCTCGCAAGTGACCGTGATTAAATGGTTTGATCCTGAATTGGTGCCTTGGGTCGAGGCGGG CATGCCTATGGACAGTGACACGCCGATGCGATTAAAGCAGCAGCTGTATCAGTTTGCTCAGCAACAAGTTGATCATCTGG TGCTGGGCTGTACCCATTATCCATTTTTTAGAGAGTTTGTTTTAGCTGAGGTAGCCAAGCAAGGACTAGATATTAAAGTA GTCGATTCAGGTGCTGCCATTGCGGCCCGAGTTAAAGCCTTGCTGCAGCAGCAAGCGGCGGCTGAATCCAGTACTGCGCG CTTGGGCCATAAGTTTCTTTTGCCCACTCAATCTGTCCTACACAGCATGCAAGGGCTGTCTGTGGGGCATACCACACAAC GTCACACAGACCGTCTTAGCGATTTAGAGCCGCAACACGCGTCAAGCTTAGCGGTGCCCAAGCTGGCATTTTTCGTCTCC GATCCCAAAGCAGATTTGGCACAGGTATCAACTATGGTGCAGCGATTAATCTATCCGGTGTAA
Upstream 100 bases:
>100_bases CGCTTATTCGATGACGGTCGCCAATTAACTTATGTGTACTTGGGCCGCAGTAGAGGTGACTGCAGCGGCTCAAGTACCTT TAGCGTAGTAAGCCTAGGCC
Downstream 100 bases:
>100_bases AGCGATCGTCATTTACCCTATGTTTTACCATATGCTTTACCAAACCCTCGGATTAGTAATATAAAGTATACGTGTTGTCA TTGTAGTTGCGCTAAGCTTA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTTQAVAINQSQDASQKAAADDDKAQMPPSVSGPAPIGIFDSGVGGLSVYMHLKQALPQEHFIYYADTLNVPYGPRPSSE IQQLSLTAVDWLVAAGCKLVVIACNSASAHALHLARQKYPHIPIVGLVPALKPAVLNSTSKNVAVLATKATLDGPLLNTV IDEYARPSQVTVIKWFDPELVPWVEAGMPMDSDTPMRLKQQLYQFAQQQVDHLVLGCTHYPFFREFVLAEVAKQGLDIKV VDSGAAIAARVKALLQQQAAAESSTARLGHKFLLPTQSVLHSMQGLSVGHTTQRHTDRLSDLEPQHASSLAVPKLAFFVS DPKADLAQVSTMVQRLIYPV
Sequences:
>Translated_340_residues MTTQAVAINQSQDASQKAAADDDKAQMPPSVSGPAPIGIFDSGVGGLSVYMHLKQALPQEHFIYYADTLNVPYGPRPSSE IQQLSLTAVDWLVAAGCKLVVIACNSASAHALHLARQKYPHIPIVGLVPALKPAVLNSTSKNVAVLATKATLDGPLLNTV IDEYARPSQVTVIKWFDPELVPWVEAGMPMDSDTPMRLKQQLYQFAQQQVDHLVLGCTHYPFFREFVLAEVAKQGLDIKV VDSGAAIAARVKALLQQQAAAESSTARLGHKFLLPTQSVLHSMQGLSVGHTTQRHTDRLSDLEPQHASSLAVPKLAFFVS DPKADLAQVSTMVQRLIYPV >Mature_339_residues TTQAVAINQSQDASQKAAADDDKAQMPPSVSGPAPIGIFDSGVGGLSVYMHLKQALPQEHFIYYADTLNVPYGPRPSSEI QQLSLTAVDWLVAAGCKLVVIACNSASAHALHLARQKYPHIPIVGLVPALKPAVLNSTSKNVAVLATKATLDGPLLNTVI DEYARPSQVTVIKWFDPELVPWVEAGMPMDSDTPMRLKQQLYQFAQQQVDHLVLGCTHYPFFREFVLAEVAKQGLDIKVV DSGAAIAARVKALLQQQAAAESSTARLGHKFLLPTQSVLHSMQGLSVGHTTQRHTDRLSDLEPQHASSLAVPKLAFFVSD PKADLAQVSTMVQRLIYPV
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=243, Percent_Identity=33.7448559670782, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 36769; Mature: 36637
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00923 ASP_GLU_RACEMASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQAVAINQSQDASQKAAADDDKAQMPPSVSGPAPIGIFDSGVGGLSVYMHLKQALPQE CCCCEEEECCCCCCHHHHCCCCCHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCHH HFIYYADTLNVPYGPRPSSEIQQLSLTAVDWLVAAGCKLVVIACNSASAHALHLARQKYP HEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCC HIPIVGLVPALKPAVLNSTSKNVAVLATKATLDGPLLNTVIDEYARPSQVTVIKWFDPEL CCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCC VPWVEAGMPMDSDTPMRLKQQLYQFAQQQVDHLVLGCTHYPFFREFVLAEVAKQGLDIKV CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEE VDSGAAIAARVKALLQQQAAAESSTARLGHKFLLPTQSVLHSMQGLSVGHTTQRHTDRLS ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHH DLEPQHASSLAVPKLAFFVSDPKADLAQVSTMVQRLIYPV CCCCHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTQAVAINQSQDASQKAAADDDKAQMPPSVSGPAPIGIFDSGVGGLSVYMHLKQALPQE CCCEEEECCCCCCHHHHCCCCCHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCHH HFIYYADTLNVPYGPRPSSEIQQLSLTAVDWLVAAGCKLVVIACNSASAHALHLARQKYP HEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCC HIPIVGLVPALKPAVLNSTSKNVAVLATKATLDGPLLNTVIDEYARPSQVTVIKWFDPEL CCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCC VPWVEAGMPMDSDTPMRLKQQLYQFAQQQVDHLVLGCTHYPFFREFVLAEVAKQGLDIKV CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEE VDSGAAIAARVKALLQQQAAAESSTARLGHKFLLPTQSVLHSMQGLSVGHTTQRHTDRLS ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHH DLEPQHASSLAVPKLAFFVSDPKADLAQVSTMVQRLIYPV CCCCHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]