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The map label for this gene is sdhD [H]

Identifier: 148652074

GI number: 148652074

Start: 308608

End: 308991

Strand: Direct

Name: sdhD [H]

Synonym: PsycPRwf_0262

Alternate gene names: 148652074

Gene position: 308608-308991 (Clockwise)

Preceding gene: 148652073

Following gene: 148652075

Centisome position: 10.36

GC content: 46.35

Gene sequence:

>384_bases
ATGAGAAGAAATGATTCTGGAATTAAAAGTGCGACAGGCCTAACCGGCTCAGGCTCGCGCGACTGGGTAATGCAGCGTAT
CAGTGCCGTCGTATTGGCCATATATGCTGTGGTAATGGTAGGGTTTTTCTTAATTAATGGTGATGTATCCTACCAGCAGT
GGGTTAGCTTCATTATGAGCCTGCCCATGCGCCTATTAAGCTTGGTCGCAATTATTGCGCTAGCGGCTCATGCTTGGGTA
GGGATGTGGACGGTATTTACCGACTATGTTAAATCTACTGGCCTACGCCTTGTGCTTCAAGCTGCTATGATTATCGCAAT
TTTGGTATACCTATTCTGGGGCGTCATGATTTTCTGGGGTCCAGGTTTACTAAACCTAGGTTAA

Upstream 100 bases:

>100_bases
GTTTTAACGAAGAGCTTCAGTCAGGTAGAACTGCGTCAATTGTGAGCTTTGTTATTGCCGCTATCTTGATAGTGCTGTCA
TTTGTATGGGTGATGTTCTA

Downstream 100 bases:

>100_bases
CAGACCAATTTGGGCGGTTTTAGCTATATTGTTAATCAGTATTGTATATAGCACGGACTGCCCTGATTTAGGTTTGGGGG
CTTAAGCACCTGTTAGCGAC

Product: succinate dehydrogenase, hydrophobic membrane anchor

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRRNDSGIKSATGLTGSGSRDWVMQRISAVVLAIYAVVMVGFFLINGDVSYQQWVSFIMSLPMRLLSLVAIIALAAHAWV
GMWTVFTDYVKSTGLRLVLQAAMIIAILVYLFWGVMIFWGPGLLNLG

Sequences:

>Translated_127_residues
MRRNDSGIKSATGLTGSGSRDWVMQRISAVVLAIYAVVMVGFFLINGDVSYQQWVSFIMSLPMRLLSLVAIIALAAHAWV
GMWTVFTDYVKSTGLRLVLQAAMIIAILVYLFWGVMIFWGPGLLNLG
>Mature_127_residues
MRRNDSGIKSATGLTGSGSRDWVMQRISAVVLAIYAVVMVGFFLINGDVSYQQWVSFIMSLPMRLLSLVAIIALAAHAWV
GMWTVFTDYVKSTGLRLVLQAAMIIAILVYLFWGVMIFWGPGLLNLG

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786941, Length=113, Percent_Identity=38.9380530973451, Blast_Score=89, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 14017; Mature: 14017

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNDSGIKSATGLTGSGSRDWVMQRISAVVLAIYAVVMVGFFLINGDVSYQQWVSFIMS
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LPMRLLSLVAIIALAAHAWVGMWTVFTDYVKSTGLRLVLQAAMIIAILVYLFWGVMIFWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGLLNLG
CCCCCCC
>Mature Secondary Structure
MRRNDSGIKSATGLTGSGSRDWVMQRISAVVLAIYAVVMVGFFLINGDVSYQQWVSFIMS
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LPMRLLSLVAIIALAAHAWVGMWTVFTDYVKSTGLRLVLQAAMIIAILVYLFWGVMIFWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGLLNLG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7698664; 12704232 [H]