Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148652020

Identifier: 148652020

GI number: 148652020

Start: 240499

End: 242013

Strand: Direct

Name: 148652020

Synonym: PsycPRwf_0204

Alternate gene names: NA

Gene position: 240499-242013 (Clockwise)

Preceding gene: 148652019

Following gene: 148652021

Centisome position: 8.07

GC content: 48.98

Gene sequence:

>1515_bases
ATGAGTAATGACTCATTGCCTAATTCAGGACACGACTCTATCACTGATGAGGGTCCTGTTTTAACCGGTACTTATGAGCA
GCTGCACAAGCCCAGTTCAAGTTTCGCCAGTCGCGATGACTATCTTAATCACGAATTACAAATCATGCAGCCTAAGCGCT
GGAAACCCAACTTGCCGTTTCGTGATTATCGCTTTGAATTCGAAGATACCATTCCTGCTTTAGCGGCCACCATTGGTAAA
GTGGTCATGGTGGGCGCCATTGCCGCGACTTTCGCCGGTGCTCTTAATTTGGGTGATGCTTTTATTCTAGAAAACGTGCG
CTATGAGTTACTTATTGTCTCGTTTTTTGTGGTGCTATTCTCCGGATTTATTCTTCCTACCGCCAACTTGGCCGGTACCC
ACGGCCCCTTAATTCCGCTTATTCCTATTGTGGTATTGGCAGGCGGTCACCCGATGGCCTTTGGTCTGCTAATTGGTCTG
TTTGGTATCTTGCTCGCCATTAGTAAAGGGGGGAGTCTGCTGGCCAACTTGACCAGTAAAGGGGTGTGTGGCGGTCTGCT
ATTGTACTTGGGCTTTATTGGTACCACCTCTCAGGTGACCAAGCTGCTTAACTGGTCCAAAGACATCAATATGCCGCACA
TTGCCTTTGTGGTAATTTTGAGCACCATTGTGTTGTATGCGGTACTGGAAAACTACAATAAGCGCTGGCTTGCGGTTCCT
TTAAGCTGCTTATTGGGCGGCGGTGTTGCTTTCTTACTGGGTGCGCCTTTTGCATTTGAGACTGCGCCAGGTATGCCGCA
TATGAGTCCGATGTACTGGTGGGGTGAAAACACAGGATGGATGTTGGGTTTGCCCAATTTAGAGAGCTTTATGGTGGTAC
TGCCATTCGCAGTACTGGCAGTAGCCATGTGGTCACCTGACTTCTTGGGCCATCAGGTGTTCCAAAAGATCAGCTATCCC
AAGCGCACGGAGCGTGTGGTGATGAACATTGATGACACCATGACCAGTGCTTCTATCCGTCAGGTGGTGGGCTCGGTGTT
AGGCGGTGCAAACTTTACCTCATCTTGGGGAACTTATATTGTGCCTGCAGCAATTGCGAAGCGTCCTATTCCAGCAGGCG
CTATTTTGACCGCTGTTTTTTGTGTGATCGCAGCGATTTGGGGCTATCCTATGGATTTGGCCATCTGGGAGCCTGTGATG
TGTGTGGCGCTGATTGTGGGCGTATTCATTCCGTTACTTGAGGCGGGCATGGAGATGACACGTGAGGGCAAAACCACTCA
ATCTGCAGCCATCGTAGTATTCGCCTCTGCCTTGGTAAACCCAGCCTTTGGTTGGTCTTTAACTATGCTACTAGACAACT
TAGGTCTTATTGGCTCAAAAGAGCGCAGCGCAGGCCTAAGCAAAATGAGCCGCTGGATTATTCCCGCCTTTATGTTCGTA
CTATTAACAGTGGTTATGGCCATGGTAGGTATGTTGCCAGGTATCCCTGCATTGATGCCAAGCTTTAGACACTAA

Upstream 100 bases:

>100_bases
ATACAATAAGCTTACACATGTACTGTATGAATTTATACATCTATTCCTTTTAACATCCTAAGCGTACGGAAGATATTTTT
TATTAGTATAAGGAGATACT

Downstream 100 bases:

>100_bases
GGCCTCATCATAAGTCTAAGCCTCACGTATAGCAAAAAGGTTGTAAAAAGCTGGCGTTATGCCAGCTTTTTTTTGTGCTT
GCAATAGTGCCCCAAAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Xanthine/Uracil/Vitamin C Permease; LOW QUALITY PROTEIN Integral Membrane Protein; Permease Family Protein

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MSNDSLPNSGHDSITDEGPVLTGTYEQLHKPSSSFASRDDYLNHELQIMQPKRWKPNLPFRDYRFEFEDTIPALAATIGK
VVMVGAIAATFAGALNLGDAFILENVRYELLIVSFFVVLFSGFILPTANLAGTHGPLIPLIPIVVLAGGHPMAFGLLIGL
FGILLAISKGGSLLANLTSKGVCGGLLLYLGFIGTTSQVTKLLNWSKDINMPHIAFVVILSTIVLYAVLENYNKRWLAVP
LSCLLGGGVAFLLGAPFAFETAPGMPHMSPMYWWGENTGWMLGLPNLESFMVVLPFAVLAVAMWSPDFLGHQVFQKISYP
KRTERVVMNIDDTMTSASIRQVVGSVLGGANFTSSWGTYIVPAAIAKRPIPAGAILTAVFCVIAAIWGYPMDLAIWEPVM
CVALIVGVFIPLLEAGMEMTREGKTTQSAAIVVFASALVNPAFGWSLTMLLDNLGLIGSKERSAGLSKMSRWIIPAFMFV
LLTVVMAMVGMLPGIPALMPSFRH

Sequences:

>Translated_504_residues
MSNDSLPNSGHDSITDEGPVLTGTYEQLHKPSSSFASRDDYLNHELQIMQPKRWKPNLPFRDYRFEFEDTIPALAATIGK
VVMVGAIAATFAGALNLGDAFILENVRYELLIVSFFVVLFSGFILPTANLAGTHGPLIPLIPIVVLAGGHPMAFGLLIGL
FGILLAISKGGSLLANLTSKGVCGGLLLYLGFIGTTSQVTKLLNWSKDINMPHIAFVVILSTIVLYAVLENYNKRWLAVP
LSCLLGGGVAFLLGAPFAFETAPGMPHMSPMYWWGENTGWMLGLPNLESFMVVLPFAVLAVAMWSPDFLGHQVFQKISYP
KRTERVVMNIDDTMTSASIRQVVGSVLGGANFTSSWGTYIVPAAIAKRPIPAGAILTAVFCVIAAIWGYPMDLAIWEPVM
CVALIVGVFIPLLEAGMEMTREGKTTQSAAIVVFASALVNPAFGWSLTMLLDNLGLIGSKERSAGLSKMSRWIIPAFMFV
LLTVVMAMVGMLPGIPALMPSFRH
>Mature_503_residues
SNDSLPNSGHDSITDEGPVLTGTYEQLHKPSSSFASRDDYLNHELQIMQPKRWKPNLPFRDYRFEFEDTIPALAATIGKV
VMVGAIAATFAGALNLGDAFILENVRYELLIVSFFVVLFSGFILPTANLAGTHGPLIPLIPIVVLAGGHPMAFGLLIGLF
GILLAISKGGSLLANLTSKGVCGGLLLYLGFIGTTSQVTKLLNWSKDINMPHIAFVVILSTIVLYAVLENYNKRWLAVPL
SCLLGGGVAFLLGAPFAFETAPGMPHMSPMYWWGENTGWMLGLPNLESFMVVLPFAVLAVAMWSPDFLGHQVFQKISYPK
RTERVVMNIDDTMTSASIRQVVGSVLGGANFTSSWGTYIVPAAIAKRPIPAGAILTAVFCVIAAIWGYPMDLAIWEPVMC
VALIVGVFIPLLEAGMEMTREGKTTQSAAIVVFASALVNPAFGWSLTMLLDNLGLIGSKERSAGLSKMSRWIIPAFMFVL
LTVVMAMVGMLPGIPALMPSFRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54416; Mature: 54285

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDSLPNSGHDSITDEGPVLTGTYEQLHKPSSSFASRDDYLNHELQIMQPKRWKPNLPF
CCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCHHHHCHHHHCCCCEEEECCCCCCCCCCC
RDYRFEFEDTIPALAATIGKVVMVGAIAATFAGALNLGDAFILENVRYELLIVSFFVVLF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SGFILPTANLAGTHGPLIPLIPIVVLAGGHPMAFGLLIGLFGILLAISKGGSLLANLTSK
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
GVCGGLLLYLGFIGTTSQVTKLLNWSKDINMPHIAFVVILSTIVLYAVLENYNKRWLAVP
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
LSCLLGGGVAFLLGAPFAFETAPGMPHMSPMYWWGENTGWMLGLPNLESFMVVLPFAVLA
HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHH
VAMWSPDFLGHQVFQKISYPKRTERVVMNIDDTMTSASIRQVVGSVLGGANFTSSWGTYI
HHHCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
VPAAIAKRPIPAGAILTAVFCVIAAIWGYPMDLAIWEPVMCVALIVGVFIPLLEAGMEMT
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REGKTTQSAAIVVFASALVNPAFGWSLTMLLDNLGLIGSKERSAGLSKMSRWIIPAFMFV
HCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLTVVMAMVGMLPGIPALMPSFRH
HHHHHHHHHHHCCCCHHHCCCCCC
>Mature Secondary Structure 
SNDSLPNSGHDSITDEGPVLTGTYEQLHKPSSSFASRDDYLNHELQIMQPKRWKPNLPF
CCCCCCCCCCCCCCCCCCEEECCHHHHCCCCHHHHCHHHHCCCCEEEECCCCCCCCCCC
RDYRFEFEDTIPALAATIGKVVMVGAIAATFAGALNLGDAFILENVRYELLIVSFFVVLF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SGFILPTANLAGTHGPLIPLIPIVVLAGGHPMAFGLLIGLFGILLAISKGGSLLANLTSK
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
GVCGGLLLYLGFIGTTSQVTKLLNWSKDINMPHIAFVVILSTIVLYAVLENYNKRWLAVP
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
LSCLLGGGVAFLLGAPFAFETAPGMPHMSPMYWWGENTGWMLGLPNLESFMVVLPFAVLA
HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHH
VAMWSPDFLGHQVFQKISYPKRTERVVMNIDDTMTSASIRQVVGSVLGGANFTSSWGTYI
HHHCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
VPAAIAKRPIPAGAILTAVFCVIAAIWGYPMDLAIWEPVMCVALIVGVFIPLLEAGMEMT
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REGKTTQSAAIVVFASALVNPAFGWSLTMLLDNLGLIGSKERSAGLSKMSRWIIPAFMFV
HCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLTVVMAMVGMLPGIPALMPSFRH
HHHHHHHHHHHCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA