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The map label for this gene is rimP

Identifier: 148651971

GI number: 148651971

Start: 183800

End: 184300

Strand: Direct

Name: rimP

Synonym: PsycPRwf_0155

Alternate gene names: 148651971

Gene position: 183800-184300 (Clockwise)

Preceding gene: 148651970

Following gene: 148651972

Centisome position: 6.17

GC content: 45.11

Gene sequence:

>501_bases
ATGAAGCTATCTAACAAAGTCACCCAGTTAACCGATATTATTGCACCAGCTGTTGCAGCTTGTGATGTGGCACTATGGGG
TGTGGAGTTCCTACCGCAAGGTGGGCGTTCGCTATTACGCATTTATATTGAAGCCTTGCCAGAAGATAAAGCAGCCGATA
AACAAGTTACTATTGAAAATTGTGCTGCCGTCACCCACCAAGTCAGTGGTGTTCTTGAAGTGCATGATCCCATCGCGGGC
GAGTATGTACTTGAAGTGTCCTCTCCAGGTCTTGATCGACCTTTCTTTGCCCCTGAGCAAATGACAGATTATATGGGTCA
GACCATCAATCTACGCTTGATTCAAGCTGTGGGTAGTGGAAGTTCAAAACGCCGCAAAGTAACCGGTAAGCTTGAGCAAT
TAGATGACAAGCAGTTATCGGTCGTGACCGCTGACGGTGAGCGCTATGATATTGCCCTTGATAATATTGATAAAGCAAAT
TTAATCTATCAAGATCTGTAG

Upstream 100 bases:

>100_bases
GTTTGTGGGTTTTTTTGTATCTGTTATTTTTAATATTGCCTAATAGTCATAATATGCATTTATAATAGATACTTCTATTT
ATGGACTAAACAAATAAGTC

Downstream 100 bases:

>100_bases
TCTTAGGGTATAAGTTGGTTGAAAGCTTACTGTCATATTTAACTTGATTTGACATCGTCAGTTACTATTAATTCAGTCTA
ATCTAATCTGCATGTCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKLSNKVTQLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIEALPEDKAADKQVTIENCAAVTHQVSGVLEVHDPIAG
EYVLEVSSPGLDRPFFAPEQMTDYMGQTINLRLIQAVGSGSSKRRKVTGKLEQLDDKQLSVVTADGERYDIALDNIDKAN
LIYQDL

Sequences:

>Translated_166_residues
MKLSNKVTQLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIEALPEDKAADKQVTIENCAAVTHQVSGVLEVHDPIAG
EYVLEVSSPGLDRPFFAPEQMTDYMGQTINLRLIQAVGSGSSKRRKVTGKLEQLDDKQLSVVTADGERYDIALDNIDKAN
LIYQDL
>Mature_166_residues
MKLSNKVTQLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIEALPEDKAADKQVTIENCAAVTHQVSGVLEVHDPIAG
EYVLEVSSPGLDRPFFAPEQMTDYMGQTINLRLIQAVGSGSSKRRKVTGKLEQLDDKQLSVVTADGERYDIALDNIDKAN
LIYQDL

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=154, Percent_Identity=41.5584415584416, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_PSYWF (A5WBS3)

Other databases:

- EMBL:   CP000713
- RefSeq:   YP_001279064.1
- ProteinModelPortal:   A5WBS3
- SMR:   A5WBS3
- STRING:   A5WBS3
- GeneID:   5205474
- GenomeReviews:   CP000713_GR
- KEGG:   prw:PsycPRwf_0155
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   TIENCAA
- ProtClustDB:   PRK14631
- BioCyc:   PSP56811:PSYCPRWF_0155-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18143; Mature: 18143

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSNKVTQLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIEALPEDKAADKQVTIEN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEHHH
CAAVTHQVSGVLEVHDPIAGEYVLEVSSPGLDRPFFAPEQMTDYMGQTINLRLIQAVGSG
HHHHHHHHHCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEEEECCC
SSKRRKVTGKLEQLDDKQLSVVTADGERYDIALDNIDKANLIYQDL
CCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCEEEECC
>Mature Secondary Structure
MKLSNKVTQLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIEALPEDKAADKQVTIEN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEHHH
CAAVTHQVSGVLEVHDPIAGEYVLEVSSPGLDRPFFAPEQMTDYMGQTINLRLIQAVGSG
HHHHHHHHHCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEEEECCC
SSKRRKVTGKLEQLDDKQLSVVTADGERYDIALDNIDKANLIYQDL
CCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA