Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148651931
Identifier: 148651931
GI number: 148651931
Start: 136691
End: 137065
Strand: Direct
Name: 148651931
Synonym: PsycPRwf_0114
Alternate gene names: NA
Gene position: 136691-137065 (Clockwise)
Preceding gene: 148651930
Following gene: 148651935
Centisome position: 4.59
GC content: 49.6
Gene sequence:
>375_bases ATGCCACATGTTATTGTTCAAGCCACCCCCAACGTTACCATTAATCGCCCTGAGCGCTTACTAAAACAGCTCAACAGCTG CCTATGGGAAACTGGCCATTTTGATAAGCCGCAAGCCATTAAAGCGCGCCTGCTTGATGTAGAGACTTTCTTAGTCGGTA TAGAGGATGATCAGCAGCAAGAGGGGTTTATTTATCTGCAATTAAGACTGATGCCCGGACGCAGCCAGCAGATTCGTGAT GAGCTGGCTGAGAAGCTACGCATCTGTTTGCAGCAAGAGCTTGAAGCACAGCAGTCTGGCCGAGTCACTGTTCAGTACTG TGTTGAAGTCATTGAGCTTAGCGCAGCTTACAGTAAGGTGCGCGTGCAGCCGTAG
Upstream 100 bases:
>100_bases CACTGACGGCTAAATTTGCCGATATTATTGATTAATACTTTAGATTTAAGTCACTTATGTCATTTTTTTGATTTCAACTT ACATTATATAGAGTATCCTA
Downstream 100 bases:
>100_bases TCCACTACTGACAGAGGTCTTGACTGGCGTAGGTGGGCAGGATAATCACTTCAGCTTGATAGCCGGCCTTGCCGCCTTGA GTTGCCATTAAGTTGCGGGC
Product: 5-carboxymethyl-2-hydroxymuconate isomerase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MPHVIVQATPNVTINRPERLLKQLNSCLWETGHFDKPQAIKARLLDVETFLVGIEDDQQQEGFIYLQLRLMPGRSQQIRD ELAEKLRICLQQELEAQQSGRVTVQYCVEVIELSAAYSKVRVQP
Sequences:
>Translated_124_residues MPHVIVQATPNVTINRPERLLKQLNSCLWETGHFDKPQAIKARLLDVETFLVGIEDDQQQEGFIYLQLRLMPGRSQQIRD ELAEKLRICLQQELEAQQSGRVTVQYCVEVIELSAAYSKVRVQP >Mature_123_residues PHVIVQATPNVTINRPERLLKQLNSCLWETGHFDKPQAIKARLLDVETFLVGIEDDQQQEGFIYLQLRLMPGRSQQIRDE LAEKLRICLQQELEAQQSGRVTVQYCVEVIELSAAYSKVRVQP
Specific function: Unknown
COG id: COG3232
COG function: function code E; 5-carboxymethyl-2-hydroxymuconate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14288; Mature: 14156
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVIVQATPNVTINRPERLLKQLNSCLWETGHFDKPQAIKARLLDVETFLVGIEDDQQQ CCCEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEECCCCCCC EGFIYLQLRLMPGRSQQIRDELAEKLRICLQQELEAQQSGRVTVQYCVEVIELSAAYSKV CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHE RVQP ECCC >Mature Secondary Structure PHVIVQATPNVTINRPERLLKQLNSCLWETGHFDKPQAIKARLLDVETFLVGIEDDQQQ CCEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEECCCCCCC EGFIYLQLRLMPGRSQQIRDELAEKLRICLQQELEAQQSGRVTVQYCVEVIELSAAYSKV CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHE RVQP ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA