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The map label for this gene is dapB [H]

Identifier: 148651858

GI number: 148651858

Start: 52237

End: 53064

Strand: Direct

Name: dapB [H]

Synonym: PsycPRwf_0041

Alternate gene names: 148651858

Gene position: 52237-53064 (Clockwise)

Preceding gene: 148651857

Following gene: 148651865

Centisome position: 1.75

GC content: 52.05

Gene sequence:

>828_bases
ATGACTCAGACTGCATCACAGACCATCAAAGTAGGCGTGATTGGTGCCGGCGGCCGGATGGGGCGCATGTTAATTGAAGC
GGTACACAACAATGCTAACACCGTATTGGCTGCCGCCATTGAGCGCAGTGGCTCAAGTCTTATCGGGGTAGATGCGGGCG
AATTGATTGGTCAACACAAAAATCAGGTCGCCTTATCAGATGACTTAGCCGCTGAGCTTGGCAACATTGATGTACTAATC
GACTTTAGCTTGCCTGACGCCACTGAAAAAAATGTGCAGTTGTGCGCGAAGCACAAGGTAGCGATGGTGATCGGTACCAC
AGGCCTCAGTGAAGCCCAAGAAGCCATGCTTAATGCCGCCAGTGCTCAAATCCCTGTGGTATATGCCGGCAACTATTCTA
CTGGTGTTAACGTGTCATTAAAGCTTATTGAGATGGCCGCTAAGGCTTTTGGTGATAGCGCTGATATCGAAGTCATTGAG
TCACATCACAAGCACAAAGTCGATGCCCCTTCAGGTACCGCCTTTATGATGGCCAATGCCGCTGCGACCGCCCGTGGTCA
GGACTTAAAACAAGTGGCTGTCTATGGCCGAGAGGGGCAAACTGGCGAGCGAAAACCAGGTAGCATTGGCATCCACGCTA
TTCGCGGCGGTGAAATCATTGGTGACCACAGTGTGATGCTAATAGCGGATGGTGAGATGGTGGAGATTAAGCATCATGCC
CGTGAGCGTATGACCTTTGCCGCAGGTGCTGTGCGTGCGGCCACTTGGGTAGTGGCACAGGCCCCAGGTCGCTATGATAT
GCAAGATGTGCTGGGTCTAAAGGGCTAA

Upstream 100 bases:

>100_bases
GTCAGGTAGACGTCAAACTTATCATGGCAACTTGCAAATTTAGCTGCATAGATAATCATGCTATTATTAGCCTCATACAG
ATTACTTAAAGGATAAAATA

Downstream 100 bases:

>100_bases
GGGCTGAGCCGCTCTGCTTTGATCTTCTAAATGGCCTAAAGTCAAAAAAGCCCATCACAGTTAAGTGTGATGGGCTTTTT
TTTGGGTTTGATGTTTACCA

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTQTASQTIKVGVIGAGGRMGRMLIEAVHNNANTVLAAAIERSGSSLIGVDAGELIGQHKNQVALSDDLAAELGNIDVLI
DFSLPDATEKNVQLCAKHKVAMVIGTTGLSEAQEAMLNAASAQIPVVYAGNYSTGVNVSLKLIEMAAKAFGDSADIEVIE
SHHKHKVDAPSGTAFMMANAAATARGQDLKQVAVYGREGQTGERKPGSIGIHAIRGGEIIGDHSVMLIADGEMVEIKHHA
RERMTFAAGAVRAATWVVAQAPGRYDMQDVLGLKG

Sequences:

>Translated_275_residues
MTQTASQTIKVGVIGAGGRMGRMLIEAVHNNANTVLAAAIERSGSSLIGVDAGELIGQHKNQVALSDDLAAELGNIDVLI
DFSLPDATEKNVQLCAKHKVAMVIGTTGLSEAQEAMLNAASAQIPVVYAGNYSTGVNVSLKLIEMAAKAFGDSADIEVIE
SHHKHKVDAPSGTAFMMANAAATARGQDLKQVAVYGREGQTGERKPGSIGIHAIRGGEIIGDHSVMLIADGEMVEIKHHA
RERMTFAAGAVRAATWVVAQAPGRYDMQDVLGLKG
>Mature_274_residues
TQTASQTIKVGVIGAGGRMGRMLIEAVHNNANTVLAAAIERSGSSLIGVDAGELIGQHKNQVALSDDLAAELGNIDVLID
FSLPDATEKNVQLCAKHKVAMVIGTTGLSEAQEAMLNAASAQIPVVYAGNYSTGVNVSLKLIEMAAKAFGDSADIEVIES
HHKHKVDAPSGTAFMMANAAATARGQDLKQVAVYGREGQTGERKPGSIGIHAIRGGEIIGDHSVMLIADGEMVEIKHHAR
ERMTFAAGAVRAATWVVAQAPGRYDMQDVLGLKG

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=266, Percent_Identity=52.2556390977444, Blast_Score=263, Evalue=8e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 28717; Mature: 28586

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTASQTIKVGVIGAGGRMGRMLIEAVHNNANTVLAAAIERSGSSLIGVDAGELIGQHK
CCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCHHHHHCCCC
NQVALSDDLAAELGNIDVLIDFSLPDATEKNVQLCAKHKVAMVIGTTGLSEAQEAMLNAA
CCEEECHHHHHHHCCEEEEEEECCCCCCCCHHHHHHCCEEEEEEECCCCHHHHHHHHHHC
SAQIPVVYAGNYSTGVNVSLKLIEMAAKAFGDSADIEVIESHHKHKVDAPSGTAFMMANA
CCCEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHCCCCEECCCCCCCEEEEECC
AATARGQDLKQVAVYGREGQTGERKPGSIGIHAIRGGEIIGDHSVMLIADGEMVEIKHHA
HHHCCCCCHHHHEEECCCCCCCCCCCCCEEEEEEECCEEECCCEEEEEECCCEEEEHHHH
RERMTFAAGAVRAATWVVAQAPGRYDMQDVLGLKG
HHHHHHHHHHHHHEEEEEEECCCCCCHHHHHCCCC
>Mature Secondary Structure 
TQTASQTIKVGVIGAGGRMGRMLIEAVHNNANTVLAAAIERSGSSLIGVDAGELIGQHK
CCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCHHHHHCCCC
NQVALSDDLAAELGNIDVLIDFSLPDATEKNVQLCAKHKVAMVIGTTGLSEAQEAMLNAA
CCEEECHHHHHHHCCEEEEEEECCCCCCCCHHHHHHCCEEEEEEECCCCHHHHHHHHHHC
SAQIPVVYAGNYSTGVNVSLKLIEMAAKAFGDSADIEVIESHHKHKVDAPSGTAFMMANA
CCCEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHCCCCEECCCCCCCEEEEECC
AATARGQDLKQVAVYGREGQTGERKPGSIGIHAIRGGEIIGDHSVMLIADGEMVEIKHHA
HHHCCCCCHHHHEEECCCCCCCCCCCCCEEEEEEECCEEECCCEEEEEECCCEEEEHHHH
RERMTFAAGAVRAATWVVAQAPGRYDMQDVLGLKG
HHHHHHHHHHHHHEEEEEEECCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA