Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550803

Identifier: 148550803

GI number: 148550803

Start: 273420

End: 274223

Strand: Direct

Name: 148550803

Synonym: Swit_5367

Alternate gene names: NA

Gene position: 273420-274223 (Clockwise)

Preceding gene: 148550802

Following gene: 148550804

Centisome position: 88.14

GC content: 65.55

Gene sequence:

>804_bases
ATGATGAGTGCTATCGCCATCGGCAGCACGGCTGCCGGCGCCGCCTTGTGCTCCCGATATTATTGCCACGCCAGCCGTTT
CATCGGCGCGGGACTGGTCGCGGCCGGCCTGCTTCTGATCGCCGAGCCCGCCTGGGCGGACCAGACCATCATGGCGTCGG
ACAGCAGCCAGGTCGACTGCCAGGCGTCGGCCAAGGACCTGACTCGCATCAGCCTCGTCGAGGACGAGTTCGCCAGCGTC
TCGAAGATCTCCACCGGCAATCCGGCGGACGATTTCAGCGTCGTCAACGAACCGGTGCGCGGCGACATCTATCTGTCGGT
CCCCGAGGGTTTCGGGCGGCCCGCGCTCTCCTTCTTCGGCACGACCAAGCGCGGCTATGTCTACAAGTTCGTTTGCCGCA
TCGGCGGCGAGCAGGCGGCGCAGGTCTTCGTTTCCAACCCGGCGATCGCGAAAGATCGGTCGGGTGAGGCGTTCGCCGCC
ACGATCAAGGCCGGCCCGCAGGATGCAGCCGTCGAACTCGTTCAGGCCATGTATTCCAACAGCATCGTCGATGGCTACGA
GATGCGGCAGCGCACTTTGCGCCCGGTCTACGTCGGCGGGCTCAAGGTCCAGATGATCGCGGAATACCGGGGGCAGGAGC
TCACCGGCAAGGTTCTGCGCATCGAAAATATGAGCAACGCGCCGATCGCGCTCAACGAAGGCGCGGTCGCGCCGCGCAGC
GCGCTCGCCGTCTCCATCACCGAGCCGACGCTCGCGCCCGGCAAGGTCACCACGGCCTATCTCGTCTCGCAGATCGGGAG
ATAG

Upstream 100 bases:

>100_bases
CCAAGGACCGCCGGACCTTCCGCTTCAAATGGAAATATTCGGGCGTCTCGCTGCAGCTCGTCGGCTTCGGGATGGTGTCC
AAAGCCGAGGAAGGAGATCA

Downstream 100 bases:

>100_bases
TCATATGGCACTCGCGGACATTTTCTCGCGCACCCGTCGCACCCTGGACGGTCCCGACGAAGAAACCGAGAATGTTTCAC
CGGTAACCGGCGAAATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDCQASAKDLTRISLVEDEFASV
SKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFGTTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAA
TIKAGPQDAAVELVQAMYSNSIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS
ALAVSITEPTLAPGKVTTAYLVSQIGR

Sequences:

>Translated_267_residues
MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDCQASAKDLTRISLVEDEFASV
SKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFGTTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAA
TIKAGPQDAAVELVQAMYSNSIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS
ALAVSITEPTLAPGKVTTAYLVSQIGR
>Mature_267_residues
MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDCQASAKDLTRISLVEDEFASV
SKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFGTTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAA
TIKAGPQDAAVELVQAMYSNSIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS
ALAVSITEPTLAPGKVTTAYLVSQIGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28214; Mature: 28214

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDC
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCC
QASAKDLTRISLVEDEFASVSKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFG
CCCHHHHHEEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCHHHHHC
TTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAATIKAGPQDAAVELVQAMYSN
CCCCCCEEEEEEHHCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHC
SIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS
CCCCHHHHHHHCCCEEEECCEEEEEEEHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCC
ALAVSITEPTLAPGKVTTAYLVSQIGR
EEEEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDC
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCC
QASAKDLTRISLVEDEFASVSKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFG
CCCHHHHHEEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCHHHHHC
TTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAATIKAGPQDAAVELVQAMYSN
CCCCCCEEEEEEHHCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHC
SIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS
CCCCHHHHHHHCCCEEEECCEEEEEEEHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCC
ALAVSITEPTLAPGKVTTAYLVSQIGR
EEEEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA