Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550803
Identifier: 148550803
GI number: 148550803
Start: 273420
End: 274223
Strand: Direct
Name: 148550803
Synonym: Swit_5367
Alternate gene names: NA
Gene position: 273420-274223 (Clockwise)
Preceding gene: 148550802
Following gene: 148550804
Centisome position: 88.14
GC content: 65.55
Gene sequence:
>804_bases ATGATGAGTGCTATCGCCATCGGCAGCACGGCTGCCGGCGCCGCCTTGTGCTCCCGATATTATTGCCACGCCAGCCGTTT CATCGGCGCGGGACTGGTCGCGGCCGGCCTGCTTCTGATCGCCGAGCCCGCCTGGGCGGACCAGACCATCATGGCGTCGG ACAGCAGCCAGGTCGACTGCCAGGCGTCGGCCAAGGACCTGACTCGCATCAGCCTCGTCGAGGACGAGTTCGCCAGCGTC TCGAAGATCTCCACCGGCAATCCGGCGGACGATTTCAGCGTCGTCAACGAACCGGTGCGCGGCGACATCTATCTGTCGGT CCCCGAGGGTTTCGGGCGGCCCGCGCTCTCCTTCTTCGGCACGACCAAGCGCGGCTATGTCTACAAGTTCGTTTGCCGCA TCGGCGGCGAGCAGGCGGCGCAGGTCTTCGTTTCCAACCCGGCGATCGCGAAAGATCGGTCGGGTGAGGCGTTCGCCGCC ACGATCAAGGCCGGCCCGCAGGATGCAGCCGTCGAACTCGTTCAGGCCATGTATTCCAACAGCATCGTCGATGGCTACGA GATGCGGCAGCGCACTTTGCGCCCGGTCTACGTCGGCGGGCTCAAGGTCCAGATGATCGCGGAATACCGGGGGCAGGAGC TCACCGGCAAGGTTCTGCGCATCGAAAATATGAGCAACGCGCCGATCGCGCTCAACGAAGGCGCGGTCGCGCCGCGCAGC GCGCTCGCCGTCTCCATCACCGAGCCGACGCTCGCGCCCGGCAAGGTCACCACGGCCTATCTCGTCTCGCAGATCGGGAG ATAG
Upstream 100 bases:
>100_bases CCAAGGACCGCCGGACCTTCCGCTTCAAATGGAAATATTCGGGCGTCTCGCTGCAGCTCGTCGGCTTCGGGATGGTGTCC AAAGCCGAGGAAGGAGATCA
Downstream 100 bases:
>100_bases TCATATGGCACTCGCGGACATTTTCTCGCGCACCCGTCGCACCCTGGACGGTCCCGACGAAGAAACCGAGAATGTTTCAC CGGTAACCGGCGAAATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDCQASAKDLTRISLVEDEFASV SKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFGTTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAA TIKAGPQDAAVELVQAMYSNSIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS ALAVSITEPTLAPGKVTTAYLVSQIGR
Sequences:
>Translated_267_residues MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDCQASAKDLTRISLVEDEFASV SKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFGTTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAA TIKAGPQDAAVELVQAMYSNSIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS ALAVSITEPTLAPGKVTTAYLVSQIGR >Mature_267_residues MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDCQASAKDLTRISLVEDEFASV SKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFGTTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAA TIKAGPQDAAVELVQAMYSNSIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS ALAVSITEPTLAPGKVTTAYLVSQIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28214; Mature: 28214
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDC CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCC QASAKDLTRISLVEDEFASVSKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFG CCCHHHHHEEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCHHHHHC TTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAATIKAGPQDAAVELVQAMYSN CCCCCCEEEEEEHHCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHC SIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS CCCCHHHHHHHCCCEEEECCEEEEEEEHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCC ALAVSITEPTLAPGKVTTAYLVSQIGR EEEEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MMSAIAIGSTAAGAALCSRYYCHASRFIGAGLVAAGLLLIAEPAWADQTIMASDSSQVDC CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCC QASAKDLTRISLVEDEFASVSKISTGNPADDFSVVNEPVRGDIYLSVPEGFGRPALSFFG CCCHHHHHEEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCHHHHHC TTKRGYVYKFVCRIGGEQAAQVFVSNPAIAKDRSGEAFAATIKAGPQDAAVELVQAMYSN CCCCCCEEEEEEHHCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHC SIVDGYEMRQRTLRPVYVGGLKVQMIAEYRGQELTGKVLRIENMSNAPIALNEGAVAPRS CCCCHHHHHHHCCCEEEECCEEEEEEEHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCC ALAVSITEPTLAPGKVTTAYLVSQIGR EEEEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA