Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

Click here to switch to the map view.

The map label for this gene is 148550768

Identifier: 148550768

GI number: 148550768

Start: 232841

End: 233332

Strand: Direct

Name: 148550768

Synonym: Swit_5332

Alternate gene names: NA

Gene position: 232841-233332 (Clockwise)

Preceding gene: 148550765

Following gene: 148550769

Centisome position: 75.05

GC content: 57.93

Gene sequence:

>492_bases
ATGAACGGACTGTTTCTGTCGACATCGGCCTTCTGCGCCCTGTCGCTGCCTGCCCAGCAGGAGGTGCTGCAGGTCATCGG
CCTTGCGTTACCGATCGGTAGCGAGACCGTCGTTGCTGGACTCGATGCTTCTTTGGCTAACGAGGATGGCGAGGGCCCGG
TCGAGCTCACAGTCGCCATGGTGCGCAAACTTACCGACAAGTTGAGCGACAAGACGCTGAACGCGCTCAAGATTATCGCG
CGGAGCGATACGCCTCAGTTTCACATGAAAGATGTGATTGAAGGAACGGATGGCGCCACCACCTACATGGACATGCGCGG
TGTCTGGTCGGCGCTGACGCGCCGCACGCGCAACATCATGGACGACGGCACTGTCGATCTCATCTGGTGGCTCGGTGACG
AGATCACGGACGAAGCCGGCACCTATGTCGATCACATTGGAGCTATCTCACCGTTGACCCATCAATCTCTGCGAACGCAT
TTCGGATATTGA

Upstream 100 bases:

>100_bases
GGATCATGTCGGAGCAACGAAAAACGTTGACCGAATCACACGAATCGTCATATTTGCTCGCATGAATCAAGACGAAGTGA
TACCAAAGGATACCAACGTA

Downstream 100 bases:

>100_bases
GGAGGCAACGCCATGGCCAGGAAGCAGGATACGGAACACCGTCGTCATCGCATAAAGACAGTGCGAACCGCTGTAGGTTA
CCAAGCGCGCGCCTTTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNGLFLSTSAFCALSLPAQQEVLQVIGLALPIGSETVVAGLDASLANEDGEGPVELTVAMVRKLTDKLSDKTLNALKIIA
RSDTPQFHMKDVIEGTDGATTYMDMRGVWSALTRRTRNIMDDGTVDLIWWLGDEITDEAGTYVDHIGAISPLTHQSLRTH
FGY

Sequences:

>Translated_163_residues
MNGLFLSTSAFCALSLPAQQEVLQVIGLALPIGSETVVAGLDASLANEDGEGPVELTVAMVRKLTDKLSDKTLNALKIIA
RSDTPQFHMKDVIEGTDGATTYMDMRGVWSALTRRTRNIMDDGTVDLIWWLGDEITDEAGTYVDHIGAISPLTHQSLRTH
FGY
>Mature_163_residues
MNGLFLSTSAFCALSLPAQQEVLQVIGLALPIGSETVVAGLDASLANEDGEGPVELTVAMVRKLTDKLSDKTLNALKIIA
RSDTPQFHMKDVIEGTDGATTYMDMRGVWSALTRRTRNIMDDGTVDLIWWLGDEITDEAGTYVDHIGAISPLTHQSLRTH
FGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17709; Mature: 17709

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLFLSTSAFCALSLPAQQEVLQVIGLALPIGSETVVAGLDASLANEDGEGPVELTVAM
CCCEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCHHHHHHHH
VRKLTDKLSDKTLNALKIIARSDTPQFHMKDVIEGTDGATTYMDMRGVWSALTRRTRNIM
HHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
DDGTVDLIWWLGDEITDEAGTYVDHIGAISPLTHQSLRTHFGY
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNGLFLSTSAFCALSLPAQQEVLQVIGLALPIGSETVVAGLDASLANEDGEGPVELTVAM
CCCEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCHHHHHHHH
VRKLTDKLSDKTLNALKIIARSDTPQFHMKDVIEGTDGATTYMDMRGVWSALTRRTRNIM
HHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
DDGTVDLIWWLGDEITDEAGTYVDHIGAISPLTHQSLRTHFGY
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA