Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550760

Identifier: 148550760

GI number: 148550760

Start: 222796

End: 224697

Strand: Direct

Name: 148550760

Synonym: Swit_5324

Alternate gene names: NA

Gene position: 222796-224697 (Clockwise)

Preceding gene: 148550759

Following gene: 148550761

Centisome position: 71.82

GC content: 59.73

Gene sequence:

>1902_bases
ATGGACCTGCAAAGTATCAAGCCCGTGTTCGCTACCGCCAAGGTCAGCAGCGCCTTGCTGATTGACGACGCGTTCGATCC
CTTGCCGGACATCGAGCCAGATGCATTCCAGGCGGGATTCCAGCTCGTTGAAGAGGATGACGCAGTCGAGACAGCCTATC
AGGCTATCGGCGGCGCCTGGCCTGTCGATCAGAACGGCTTTTCGACGGCACTGACGACGGATAACGCCTTGCGTGAGCAG
ATCGAGCAGGCGCTGGCGGGCCCTGCGGATTCGCCGCTCGGCCGTCTGGCGCAGGCTCTGTTTGGCGTGGCTGCCGAGAA
TCATCGAGCAAAGATCGCCCCCTTGCAGGCTCTGTGCGCCCTCCTGCAGCAGGTCGGCATCGAGCCCACGGCAATCGGCA
GCACGGGTAAACCCAAGGGCAGGAAGAAGCGCTTCCCGCTGATTTTTCTGGACTATTATCTGGGTGAGGATGGGCTTCCC
TCGGTCGATCGCTCGATCGAGAAGATCAAGGACGTGCTCACAGGCTACCCCGATGATGAAAAGCCCATTGTGGTGCTCAT
GTCATCCGAACTTCGTGACGAAAATCTGGCCGACCAGTTCCGTGAAAAAGCCAACCTTTTGGGATGCCAGTTCAAATTCG
TTACCAAGGACAAGTTCACAGGCGCCGCGTTCGAATTCGTCTCGAGCCTCGCGGATCGGGCGGAATTCATTGGCCAATCG
CGCGTGCTCAGCGAATTCGTCAGGTCTTGGCGCGACGCGCTTGAGGGCGCGATTGGAGCCTTCGAAAAAGAGATCAAGTC
ACTTGATCTGCAGGACTTCTACTTCATCTGGGAGAAAGCGGGCGAGGGCAAGAACAACCGTTTTGGCGAACACCTGTCGT
CACTGTTCGAGGGTTACCTGCGCAAGCAGATAGAAGACGCCGACGCTCTGCTCACGGCCACGGAGAAGGTGAACAAACTT
TCCTTTTCGACGATGCCGCCAGGACCGCTCGTGCCGAGTGACACGGTCGCGCGCCTCGCTCATGCCGCGGCCTTCCGCGA
CATCGATCCCTTCCCGGAAAACTACACCGGTCCACCGCTGGGAATCGACCTTGGCGAACTGTTCATCCGCGACAGGACAA
TTCCAGCCGCGCGCGGCCGCAAAAAGGCGCGTGAACTGGTGGCGATGATGGTCATCTCCCAGGCGTGCGACCTGGAGCAC
GGGAAAGTCGGTACGGTTCTCATGGTCGAGGGAACGGTCCAACTGCGCACCGCTTCGACGCGCGACACGAACGAGGAAGC
GCACCGCCGGCTGCGCGTCGATATCTTTCAGTATGAAAACGGCGTGGGCGAGAAGGAGGATCTCATCATTGAGTGGGACG
CCCAGCGCCTGCGCACATTCAACGTCGATACCTTTCATAAGGATATGCGTGCCGCAGGCTTTGATCGGGTCGCACGATTG
CGCCCCGTCCATGCCTTGGCCATGCAGCAGAAGTTCGCGGCGAACCTGACCCGCGTCGGTATGCCCGATGCACTCCCGGC
CTATCGATATGGTGGTATGGAGGTGCATGTCGCAGGCCCCGGTGACAATACGCTGATCCGCCTGATGGATCCTGTCCCGA
AGGCCGACAAACCAATGTGCGTCGTTGGCGAGGATCCAAGAAGGATGGTTGTGACCGATCCCGCTCTCGAGCGAGTTCGC
TCGGCGCTGCGGGCTGCTGATCCTGCCCAGTTCGCGGAAGGTGCCATCGAGGCGCTGCGCACGGAGTTCGACGATATCAA
GAAACTGCGCCGTATGCGCAGCTGCGAACTTCAGGCAGGCAAGCGCGATCTGGGCGCCGTTTTGATCGTCGACGGACCGT
TAGGTGACGGTTTCAAGCGCCCGGCGAAGGTGAGGATTATCCTCAGTCATTTTACGCCCTAG

Upstream 100 bases:

>100_bases
AATCGCGCGCCGGCATTCGAGCGATCTTTATCTTCAGGAGGGGGCGGACACGACCGGTCGTCTGCATACCTTCGTTCTCG
ACATGGCAGGAAGCTGAAGG

Downstream 100 bases:

>100_bases
GTCCTTTTTTGTTCCAGCTCGTGTTGCGCCTATGGCAAATTTACCATAGGGTCGGTCAGTCCCCATTTGGGGTGCTCGAA
CGTAGGCGGGGGCATTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAWPVDQNGFSTALTTDNALREQ
IEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCALLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLP
SVDRSIEKIKDVLTGYPDDEKPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS
RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYLRKQIEDADALLTATEKVNKL
SFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPLGIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEH
GKVGTVLMVEGTVQLRTASTRDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL
RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMCVVGEDPRRMVVTDPALERVR
SALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAGKRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP

Sequences:

>Translated_633_residues
MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAWPVDQNGFSTALTTDNALREQ
IEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCALLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLP
SVDRSIEKIKDVLTGYPDDEKPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS
RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYLRKQIEDADALLTATEKVNKL
SFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPLGIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEH
GKVGTVLMVEGTVQLRTASTRDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL
RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMCVVGEDPRRMVVTDPALERVR
SALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAGKRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP
>Mature_633_residues
MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAWPVDQNGFSTALTTDNALREQ
IEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCALLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLP
SVDRSIEKIKDVLTGYPDDEKPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS
RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYLRKQIEDADALLTATEKVNKL
SFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPLGIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEH
GKVGTVLMVEGTVQLRTASTRDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL
RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMCVVGEDPRRMVVTDPALERVR
SALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAGKRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69943; Mature: 69943

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAW
CCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
PVDQNGFSTALTTDNALREQIEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCA
CCCCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLPSVDRSIEKIKDVLTGYPDDE
HHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
KPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS
CCEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RKQIEDADALLTATEKVNKLSFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
GIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEHGKVGTVLMVEGTVQLRTAST
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEEECCC
RDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL
CCCCHHHHHHHHHHEEECCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHH
RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMC
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCCEEEEECCCCCCCCCEE
VVGEDPRRMVVTDPALERVRSALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAG
EECCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP
CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAW
CCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
PVDQNGFSTALTTDNALREQIEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCA
CCCCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLPSVDRSIEKIKDVLTGYPDDE
HHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
KPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS
CCEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RKQIEDADALLTATEKVNKLSFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
GIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEHGKVGTVLMVEGTVQLRTAST
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEEECCC
RDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL
CCCCHHHHHHHHHHEEECCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHH
RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMC
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCCEEEEECCCCCCCCCEE
VVGEDPRRMVVTDPALERVRSALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAG
EECCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP
CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA