Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550760
Identifier: 148550760
GI number: 148550760
Start: 222796
End: 224697
Strand: Direct
Name: 148550760
Synonym: Swit_5324
Alternate gene names: NA
Gene position: 222796-224697 (Clockwise)
Preceding gene: 148550759
Following gene: 148550761
Centisome position: 71.82
GC content: 59.73
Gene sequence:
>1902_bases ATGGACCTGCAAAGTATCAAGCCCGTGTTCGCTACCGCCAAGGTCAGCAGCGCCTTGCTGATTGACGACGCGTTCGATCC CTTGCCGGACATCGAGCCAGATGCATTCCAGGCGGGATTCCAGCTCGTTGAAGAGGATGACGCAGTCGAGACAGCCTATC AGGCTATCGGCGGCGCCTGGCCTGTCGATCAGAACGGCTTTTCGACGGCACTGACGACGGATAACGCCTTGCGTGAGCAG ATCGAGCAGGCGCTGGCGGGCCCTGCGGATTCGCCGCTCGGCCGTCTGGCGCAGGCTCTGTTTGGCGTGGCTGCCGAGAA TCATCGAGCAAAGATCGCCCCCTTGCAGGCTCTGTGCGCCCTCCTGCAGCAGGTCGGCATCGAGCCCACGGCAATCGGCA GCACGGGTAAACCCAAGGGCAGGAAGAAGCGCTTCCCGCTGATTTTTCTGGACTATTATCTGGGTGAGGATGGGCTTCCC TCGGTCGATCGCTCGATCGAGAAGATCAAGGACGTGCTCACAGGCTACCCCGATGATGAAAAGCCCATTGTGGTGCTCAT GTCATCCGAACTTCGTGACGAAAATCTGGCCGACCAGTTCCGTGAAAAAGCCAACCTTTTGGGATGCCAGTTCAAATTCG TTACCAAGGACAAGTTCACAGGCGCCGCGTTCGAATTCGTCTCGAGCCTCGCGGATCGGGCGGAATTCATTGGCCAATCG CGCGTGCTCAGCGAATTCGTCAGGTCTTGGCGCGACGCGCTTGAGGGCGCGATTGGAGCCTTCGAAAAAGAGATCAAGTC ACTTGATCTGCAGGACTTCTACTTCATCTGGGAGAAAGCGGGCGAGGGCAAGAACAACCGTTTTGGCGAACACCTGTCGT CACTGTTCGAGGGTTACCTGCGCAAGCAGATAGAAGACGCCGACGCTCTGCTCACGGCCACGGAGAAGGTGAACAAACTT TCCTTTTCGACGATGCCGCCAGGACCGCTCGTGCCGAGTGACACGGTCGCGCGCCTCGCTCATGCCGCGGCCTTCCGCGA CATCGATCCCTTCCCGGAAAACTACACCGGTCCACCGCTGGGAATCGACCTTGGCGAACTGTTCATCCGCGACAGGACAA TTCCAGCCGCGCGCGGCCGCAAAAAGGCGCGTGAACTGGTGGCGATGATGGTCATCTCCCAGGCGTGCGACCTGGAGCAC GGGAAAGTCGGTACGGTTCTCATGGTCGAGGGAACGGTCCAACTGCGCACCGCTTCGACGCGCGACACGAACGAGGAAGC GCACCGCCGGCTGCGCGTCGATATCTTTCAGTATGAAAACGGCGTGGGCGAGAAGGAGGATCTCATCATTGAGTGGGACG CCCAGCGCCTGCGCACATTCAACGTCGATACCTTTCATAAGGATATGCGTGCCGCAGGCTTTGATCGGGTCGCACGATTG CGCCCCGTCCATGCCTTGGCCATGCAGCAGAAGTTCGCGGCGAACCTGACCCGCGTCGGTATGCCCGATGCACTCCCGGC CTATCGATATGGTGGTATGGAGGTGCATGTCGCAGGCCCCGGTGACAATACGCTGATCCGCCTGATGGATCCTGTCCCGA AGGCCGACAAACCAATGTGCGTCGTTGGCGAGGATCCAAGAAGGATGGTTGTGACCGATCCCGCTCTCGAGCGAGTTCGC TCGGCGCTGCGGGCTGCTGATCCTGCCCAGTTCGCGGAAGGTGCCATCGAGGCGCTGCGCACGGAGTTCGACGATATCAA GAAACTGCGCCGTATGCGCAGCTGCGAACTTCAGGCAGGCAAGCGCGATCTGGGCGCCGTTTTGATCGTCGACGGACCGT TAGGTGACGGTTTCAAGCGCCCGGCGAAGGTGAGGATTATCCTCAGTCATTTTACGCCCTAG
Upstream 100 bases:
>100_bases AATCGCGCGCCGGCATTCGAGCGATCTTTATCTTCAGGAGGGGGCGGACACGACCGGTCGTCTGCATACCTTCGTTCTCG ACATGGCAGGAAGCTGAAGG
Downstream 100 bases:
>100_bases GTCCTTTTTTGTTCCAGCTCGTGTTGCGCCTATGGCAAATTTACCATAGGGTCGGTCAGTCCCCATTTGGGGTGCTCGAA CGTAGGCGGGGGCATTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAWPVDQNGFSTALTTDNALREQ IEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCALLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLP SVDRSIEKIKDVLTGYPDDEKPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYLRKQIEDADALLTATEKVNKL SFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPLGIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEH GKVGTVLMVEGTVQLRTASTRDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMCVVGEDPRRMVVTDPALERVR SALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAGKRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP
Sequences:
>Translated_633_residues MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAWPVDQNGFSTALTTDNALREQ IEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCALLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLP SVDRSIEKIKDVLTGYPDDEKPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYLRKQIEDADALLTATEKVNKL SFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPLGIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEH GKVGTVLMVEGTVQLRTASTRDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMCVVGEDPRRMVVTDPALERVR SALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAGKRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP >Mature_633_residues MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAWPVDQNGFSTALTTDNALREQ IEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCALLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLP SVDRSIEKIKDVLTGYPDDEKPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYLRKQIEDADALLTATEKVNKL SFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPLGIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEH GKVGTVLMVEGTVQLRTASTRDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMCVVGEDPRRMVVTDPALERVR SALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAGKRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69943; Mature: 69943
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAW CCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC PVDQNGFSTALTTDNALREQIEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCA CCCCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLPSVDRSIEKIKDVLTGYPDDE HHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC KPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS CCEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RKQIEDADALLTATEKVNKLSFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC GIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEHGKVGTVLMVEGTVQLRTAST CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEEECCC RDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL CCCCHHHHHHHHHHEEECCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHH RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMC HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCCEEEEECCCCCCCCCEE VVGEDPRRMVVTDPALERVRSALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAG EECCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MDLQSIKPVFATAKVSSALLIDDAFDPLPDIEPDAFQAGFQLVEEDDAVETAYQAIGGAW CCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC PVDQNGFSTALTTDNALREQIEQALAGPADSPLGRLAQALFGVAAENHRAKIAPLQALCA CCCCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LLQQVGIEPTAIGSTGKPKGRKKRFPLIFLDYYLGEDGLPSVDRSIEKIKDVLTGYPDDE HHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC KPIVVLMSSELRDENLADQFREKANLLGCQFKFVTKDKFTGAAFEFVSSLADRAEFIGQS CCEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH RVLSEFVRSWRDALEGAIGAFEKEIKSLDLQDFYFIWEKAGEGKNNRFGEHLSSLFEGYL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RKQIEDADALLTATEKVNKLSFSTMPPGPLVPSDTVARLAHAAAFRDIDPFPENYTGPPL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC GIDLGELFIRDRTIPAARGRKKARELVAMMVISQACDLEHGKVGTVLMVEGTVQLRTAST CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEEECCC RDTNEEAHRRLRVDIFQYENGVGEKEDLIIEWDAQRLRTFNVDTFHKDMRAAGFDRVARL CCCCHHHHHHHHHHEEECCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHH RPVHALAMQQKFAANLTRVGMPDALPAYRYGGMEVHVAGPGDNTLIRLMDPVPKADKPMC HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCCEEEEECCCCCCCCCEE VVGEDPRRMVVTDPALERVRSALRAADPAQFAEGAIEALRTEFDDIKKLRRMRSCELQAG EECCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KRDLGAVLIVDGPLGDGFKRPAKVRIILSHFTP CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA