Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550732
Identifier: 148550732
GI number: 148550732
Start: 196579
End: 196938
Strand: Direct
Name: 148550732
Synonym: Swit_5296
Alternate gene names: NA
Gene position: 196579-196938 (Clockwise)
Preceding gene: 148550731
Following gene: 148550733
Centisome position: 63.37
GC content: 64.72
Gene sequence:
>360_bases ATGGTCTTGGATCGCCCGGTCCTGCTGTTCGAAAGCGATCAGCCCGTCCTGTCCTCCCTGCAGTTCGCGCTGAGCCTTGA GGGGTTCCTGCCCGCGGATGGCAATGCGCGGGAGGCTGATCCCGCGGCGGCCGATTGCCTCGTCATCGACCAGCGATATC GCGCCGACGGGATCGGCTTTCTCCAGGAGTTGCGGGACAAGGGCGTCGCCGTACCGGCAATCCTGCTGGCGACCAATCCC TCGCGGGAACTCCGGCGACGGATGAAGCCGCTCGGAGCGGTCCTGATCGAGAAGCCGCTGCTCGGCAACGAACTCACTGA TGCCCTTTTGACCATCATCGCTTCCAGCAAGGCCGCCTGA
Upstream 100 bases:
>100_bases TGCCAGTTGGAGCCGTCGCGCAATGCCCGCCCCACGCCGAGCTCGTCCCGAACTGGAAGAAAGCCGCCTGAGCCTCGGCC TGACTGCGGAAGGACACGAC
Downstream 100 bases:
>100_bases CATGTCTGCTTGCTCTATCGACGAAACCGCCATCGACCTGCTCGTGCCTGCCTTCTATGCCCGCGTCCGGGCGGATGCGT TGCTCGGGCCGATCTTCGAG
Product: response regulator receiver protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MVLDRPVLLFESDQPVLSSLQFALSLEGFLPADGNAREADPAAADCLVIDQRYRADGIGFLQELRDKGVAVPAILLATNP SRELRRRMKPLGAVLIEKPLLGNELTDALLTIIASSKAA
Sequences:
>Translated_119_residues MVLDRPVLLFESDQPVLSSLQFALSLEGFLPADGNAREADPAAADCLVIDQRYRADGIGFLQELRDKGVAVPAILLATNP SRELRRRMKPLGAVLIEKPLLGNELTDALLTIIASSKAA >Mature_119_residues MVLDRPVLLFESDQPVLSSLQFALSLEGFLPADGNAREADPAAADCLVIDQRYRADGIGFLQELRDKGVAVPAILLATNP SRELRRRMKPLGAVLIEKPLLGNELTDALLTIIASSKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12824; Mature: 12824
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLDRPVLLFESDQPVLSSLQFALSLEGFLPADGNAREADPAAADCLVIDQRYRADGIGF CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH LQELRDKGVAVPAILLATNPSRELRRRMKPLGAVLIEKPLLGNELTDALLTIIASSKAA HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVLDRPVLLFESDQPVLSSLQFALSLEGFLPADGNAREADPAAADCLVIDQRYRADGIGF CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH LQELRDKGVAVPAILLATNPSRELRRRMKPLGAVLIEKPLLGNELTDALLTIIASSKAA HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA