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The map label for this gene is yubM [H]

Identifier: 148550698

GI number: 148550698

Start: 151005

End: 153194

Strand: Reverse

Name: yubM [H]

Synonym: Swit_5262

Alternate gene names: 148550698

Gene position: 153194-151005 (Counterclockwise)

Preceding gene: 148550701

Following gene: 148550697

Centisome position: 49.38

GC content: 67.35

Gene sequence:

>2190_bases
ATGGTCCGGGCATCAAGGAGACTTCCAGTGATCGACAGCGTCAAACTCAACAAGCTCCGCCTCTCGCCGATCAATGTGCG
CAAGGTTTCGGAAGACCGGCTGCGTCTCGATGAACTCACCCCCGACGTCGAGGCCCGCGGCATCCTGCAGAACATGCTGG
TGACCCCGGCCAAGCCCAAGGGTACGTTCGAAGTGCTCGACGGGGGACGGCGCTGGCGCGCGCTGATGCGCCTGGTCGAG
GCGGGCACGATCGTCGCGGCCGACTATGACGTGCCGGTGCGCGTCATCACGGGCGATATCGCGCATCTGAGCGAAACGTC
CTTCGCCGCCACCTATCACCAGCTGCCGCTCACCCCGGCCGAAGAATGCCGCGCCTATGAGCATTTCATCGGCAAGGGCG
CCGACATAGACGGGGTCGCCAAACGCTTCGGCAAGACCCGCCGCTTCGTCGAAGGCCGCCTGCGCCTGGCCTCACTGGCC
GAGCCGATCTTCGACGCGCTGGCCTCGGGCGCGATTACGCTCGACATTGCCAAGGCCTATGCCTCGACGGAAAGCCACGA
CAAGCAGCTCGATGTCTGGAGCACCTACGGCCAGAACAGCTACGTCAACGCCGATTCCATCCGCCGCGTCATCGCCAACG
ACGCCCTTAAATCCAACGAACCGATCGCGCTCCTGATCGGCGAGGACCGCTATGCGGCCGCCGGCGGCCGGGTCGATCGC
GACCTCTTCAGCGAGGGCGGCGACCGCTGGATCGATCCCGAAATTGCCAAGGGCGTCGCTGCCGAGATGATGGAAGCCGA
GGCCAAGCGCATCGGCGAGGAATCCGGGCTCGCCTGGATCCGGCCGATCGCGAGCAGCTATGCCTATAACCACGCGCAGG
ATCTCTACCGCGTCATGCTCGATCCGCCCGAACTGACCGACGAGCAGGCCGCGCGCCTGGAAGCGATCGAGGCACGGCGC
AGCGAGCTCGAAGAGCTGATGCAGGACGAGGCGCTCGACGAGGATCAGTTCAAGGCACTCGACAGCGAGGACGACGCGCT
GATGGCCGAGGCCGAAGCCATCGAGAACCGGCTGCCGGTGCTGCCCGACGAGCTCAAGCCGCATGTCGGCGCGTTCCTCC
TGCTGACCCCGCAGGGCGAAATGCGCCTCGACACGCAGTTCTTCAGCGAACAGCCCATCCAGCGCATCGATGACGAGGCG
CAGGGCGAGGGCGAGGAGGACGACGGCGAGGGCGGCGAAGAGGGCGAGCGCCTGGCAGGCGGTTTCCGCATCGGCGGGGC
CGACAAGGAGGCGCCCAGCCTGCCCGAGGAAGCCGTGGGTCCGGGCGGCAAGCCGCTCAGCGCCCGGCTCTACGACGAAC
TCGCCATGCAGCGCCGCGACATTCTGGCAGCCTCGCTCCTCGCCGAACCCGCGCTCGCGCTCGACTATGCCCTGTTCACG
ATGATCGACGCGCGCAGCCAGTCCACGCGTCATACCGGCTATCACAGCGTCCACTATGGCTCGACGCTGCGGGCCGGAGC
ACCGCAAGACCCGATCTCGGGTGACATGCCGGTGACCCGGGCGCGGCAGTATCTCGCCGAGGCCCATGACGGGCTCGACG
CGGCCTGGACGGAACCGGCCGATATCGTGGAGCGGTTCGAGGCCTTCCGCGCGCTCGGTGACGACGCCAAGGCAGCCTGG
CTCGCCTATATCGTCGCCGTCTCGCTCGAGGCCAAGGGCGGTTTCAAGGCGGAACAGATCCCGCTGCAGAACCGCCTCGC
CTCGATCCTCGAGATCGATGTCGCCGCCTGGTGGCGACCCACCGCGGAGAATTTCTTCGACCGGGTCAACAAGGGCACTA
TCCTCACCCTGCTCAACGATGTCGGCGGGGGCTCGCTGACCGCGCGCCATGCCACGCTGAAGAAGGGCGAGATCGCCGCA
AGCTGCGAGAAGCTCTTTGCCGGGGAGTCGATCGTCGAGCCGGACGTCAAGGAGGCGGCGCTCGCCTGGGTCCCCAATGC
CATGCGCTTCCTGGATCGCGTGCCGGAACAGGCCGAGGAGCCCTTCGATGCGCTTGGCGACCTGGACGTGGCCGAAAGCG
ACGGGGCTGATGACAGCGAGACCGACGACGGGGACGCGGTGACCGCCGCGCCGACGGCTTCCGCGCCGGCCGAGGCCGAC
GAAGACGAACTCGCCGCCGCCGAGGCCTGA

Upstream 100 bases:

>100_bases
GCACCATAGGCCGCTGCCCCCGGTCGGACGGCCGAGGCGGCCGAAACGGCCAGCGGCGGGGCCGCTGCAAAGAGAAGGGG
GGTCGGAAGGGTGTCCCGGG

Downstream 100 bases:

>100_bases
GCCTCAAATCCTGTCCGCAAGCGACCACCGGCGTGTCCGCGCGCCGGTGGTCGTCTCGTCTGTGAGGAGTTTTCCATCAT
GTCCAAGCCTGCACGAACCG

Product: ParB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 729; Mature: 729

Protein sequence:

>729_residues
MVRASRRLPVIDSVKLNKLRLSPINVRKVSEDRLRLDELTPDVEARGILQNMLVTPAKPKGTFEVLDGGRRWRALMRLVE
AGTIVAADYDVPVRVITGDIAHLSETSFAATYHQLPLTPAEECRAYEHFIGKGADIDGVAKRFGKTRRFVEGRLRLASLA
EPIFDALASGAITLDIAKAYASTESHDKQLDVWSTYGQNSYVNADSIRRVIANDALKSNEPIALLIGEDRYAAAGGRVDR
DLFSEGGDRWIDPEIAKGVAAEMMEAEAKRIGEESGLAWIRPIASSYAYNHAQDLYRVMLDPPELTDEQAARLEAIEARR
SELEELMQDEALDEDQFKALDSEDDALMAEAEAIENRLPVLPDELKPHVGAFLLLTPQGEMRLDTQFFSEQPIQRIDDEA
QGEGEEDDGEGGEEGERLAGGFRIGGADKEAPSLPEEAVGPGGKPLSARLYDELAMQRRDILAASLLAEPALALDYALFT
MIDARSQSTRHTGYHSVHYGSTLRAGAPQDPISGDMPVTRARQYLAEAHDGLDAAWTEPADIVERFEAFRALGDDAKAAW
LAYIVAVSLEAKGGFKAEQIPLQNRLASILEIDVAAWWRPTAENFFDRVNKGTILTLLNDVGGGSLTARHATLKKGEIAA
SCEKLFAGESIVEPDVKEAALAWVPNAMRFLDRVPEQAEEPFDALGDLDVAESDGADDSETDDGDAVTAAPTASAPAEAD
EDELAAAEA

Sequences:

>Translated_729_residues
MVRASRRLPVIDSVKLNKLRLSPINVRKVSEDRLRLDELTPDVEARGILQNMLVTPAKPKGTFEVLDGGRRWRALMRLVE
AGTIVAADYDVPVRVITGDIAHLSETSFAATYHQLPLTPAEECRAYEHFIGKGADIDGVAKRFGKTRRFVEGRLRLASLA
EPIFDALASGAITLDIAKAYASTESHDKQLDVWSTYGQNSYVNADSIRRVIANDALKSNEPIALLIGEDRYAAAGGRVDR
DLFSEGGDRWIDPEIAKGVAAEMMEAEAKRIGEESGLAWIRPIASSYAYNHAQDLYRVMLDPPELTDEQAARLEAIEARR
SELEELMQDEALDEDQFKALDSEDDALMAEAEAIENRLPVLPDELKPHVGAFLLLTPQGEMRLDTQFFSEQPIQRIDDEA
QGEGEEDDGEGGEEGERLAGGFRIGGADKEAPSLPEEAVGPGGKPLSARLYDELAMQRRDILAASLLAEPALALDYALFT
MIDARSQSTRHTGYHSVHYGSTLRAGAPQDPISGDMPVTRARQYLAEAHDGLDAAWTEPADIVERFEAFRALGDDAKAAW
LAYIVAVSLEAKGGFKAEQIPLQNRLASILEIDVAAWWRPTAENFFDRVNKGTILTLLNDVGGGSLTARHATLKKGEIAA
SCEKLFAGESIVEPDVKEAALAWVPNAMRFLDRVPEQAEEPFDALGDLDVAESDGADDSETDDGDAVTAAPTASAPAEAD
EDELAAAEA
>Mature_729_residues
MVRASRRLPVIDSVKLNKLRLSPINVRKVSEDRLRLDELTPDVEARGILQNMLVTPAKPKGTFEVLDGGRRWRALMRLVE
AGTIVAADYDVPVRVITGDIAHLSETSFAATYHQLPLTPAEECRAYEHFIGKGADIDGVAKRFGKTRRFVEGRLRLASLA
EPIFDALASGAITLDIAKAYASTESHDKQLDVWSTYGQNSYVNADSIRRVIANDALKSNEPIALLIGEDRYAAAGGRVDR
DLFSEGGDRWIDPEIAKGVAAEMMEAEAKRIGEESGLAWIRPIASSYAYNHAQDLYRVMLDPPELTDEQAARLEAIEARR
SELEELMQDEALDEDQFKALDSEDDALMAEAEAIENRLPVLPDELKPHVGAFLLLTPQGEMRLDTQFFSEQPIQRIDDEA
QGEGEEDDGEGGEEGERLAGGFRIGGADKEAPSLPEEAVGPGGKPLSARLYDELAMQRRDILAASLLAEPALALDYALFT
MIDARSQSTRHTGYHSVHYGSTLRAGAPQDPISGDMPVTRARQYLAEAHDGLDAAWTEPADIVERFEAFRALGDDAKAAW
LAYIVAVSLEAKGGFKAEQIPLQNRLASILEIDVAAWWRPTAENFFDRVNKGTILTLLNDVGGGSLTARHATLKKGEIAA
SCEKLFAGESIVEPDVKEAALAWVPNAMRFLDRVPEQAEEPFDALGDLDVAESDGADDSETDDGDAVTAAPTASAPAEAD
EDELAAAEA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 79416; Mature: 79416

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRASRRLPVIDSVKLNKLRLSPINVRKVSEDRLRLDELTPDVEARGILQNMLVTPAKPK
CCCCCCCCCCCCCCCCCEEECCCCCCEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
GTFEVLDGGRRWRALMRLVEAGTIVAADYDVPVRVITGDIAHLSETSFAATYHQLPLTPA
CCHHHHCCCHHHHHHHHHHHCCCEEEECCCCCEEEEECCHHHHCCCHHHHHHHCCCCCCH
EECRAYEHFIGKGADIDGVAKRFGKTRRFVEGRLRLASLAEPIFDALASGAITLDIAKAY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH
ASTESHDKQLDVWSTYGQNSYVNADSIRRVIANDALKSNEPIALLIGEDRYAAAGGRVDR
HCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCH
DLFSEGGDRWIDPEIAKGVAAEMMEAEAKRIGEESGLAWIRPIASSYAYNHAQDLYRVML
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHC
DPPELTDEQAARLEAIEARRSELEELMQDEALDEDQFKALDSEDDALMAEAEAIENRLPV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCC
LPDELKPHVGAFLLLTPQGEMRLDTQFFSEQPIQRIDDEAQGEGEEDDGEGGEEGERLAG
CCHHHCCCCCEEEEECCCCCCEECHHHHHCCCHHHCCCHHCCCCCCCCCCCCCCHHHHHC
GFRIGGADKEAPSLPEEAVGPGGKPLSARLYDELAMQRRDILAASLLAEPALALDYALFT
CEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
MIDARSQSTRHTGYHSVHYGSTLRAGAPQDPISGDMPVTRARQYLAEAHDGLDAAWTEPA
HHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
DIVERFEAFRALGDDAKAAWLAYIVAVSLEAKGGFKAEQIPLQNRLASILEIDVAAWWRP
HHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCHHCCCHHHHHHHHHHHHHHHHCCC
TAENFFDRVNKGTILTLLNDVGGGSLTARHATLKKGEIAASCEKLFAGESIVEPDVKEAA
HHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHH
LAWVPNAMRFLDRVPEQAEEPFDALGDLDVAESDGADDSETDDGDAVTAAPTASAPAEAD
HHHCCHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
EDELAAAEA
HHHHHHCCC
>Mature Secondary Structure
MVRASRRLPVIDSVKLNKLRLSPINVRKVSEDRLRLDELTPDVEARGILQNMLVTPAKPK
CCCCCCCCCCCCCCCCCEEECCCCCCEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
GTFEVLDGGRRWRALMRLVEAGTIVAADYDVPVRVITGDIAHLSETSFAATYHQLPLTPA
CCHHHHCCCHHHHHHHHHHHCCCEEEECCCCCEEEEECCHHHHCCCHHHHHHHCCCCCCH
EECRAYEHFIGKGADIDGVAKRFGKTRRFVEGRLRLASLAEPIFDALASGAITLDIAKAY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH
ASTESHDKQLDVWSTYGQNSYVNADSIRRVIANDALKSNEPIALLIGEDRYAAAGGRVDR
HCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCH
DLFSEGGDRWIDPEIAKGVAAEMMEAEAKRIGEESGLAWIRPIASSYAYNHAQDLYRVML
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHC
DPPELTDEQAARLEAIEARRSELEELMQDEALDEDQFKALDSEDDALMAEAEAIENRLPV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCC
LPDELKPHVGAFLLLTPQGEMRLDTQFFSEQPIQRIDDEAQGEGEEDDGEGGEEGERLAG
CCHHHCCCCCEEEEECCCCCCEECHHHHHCCCHHHCCCHHCCCCCCCCCCCCCCHHHHHC
GFRIGGADKEAPSLPEEAVGPGGKPLSARLYDELAMQRRDILAASLLAEPALALDYALFT
CEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
MIDARSQSTRHTGYHSVHYGSTLRAGAPQDPISGDMPVTRARQYLAEAHDGLDAAWTEPA
HHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
DIVERFEAFRALGDDAKAAWLAYIVAVSLEAKGGFKAEQIPLQNRLASILEIDVAAWWRP
HHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCHHCCCHHHHHHHHHHHHHHHHCCC
TAENFFDRVNKGTILTLLNDVGGGSLTARHATLKKGEIAASCEKLFAGESIVEPDVKEAA
HHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHH
LAWVPNAMRFLDRVPEQAEEPFDALGDLDVAESDGADDSETDDGDAVTAAPTASAPAEAD
HHHCCHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
EDELAAAEA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]