Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550678

Identifier: 148550678

GI number: 148550678

Start: 131487

End: 131990

Strand: Reverse

Name: 148550678

Synonym: Swit_5241

Alternate gene names: NA

Gene position: 131990-131487 (Counterclockwise)

Preceding gene: 148550679

Following gene: 148550677

Centisome position: 42.55

GC content: 66.27

Gene sequence:

>504_bases
ATGGCAAACCGCGTTTCCGCGTCAATCACGCTCGGCGGCACCCTCTCATCACTTGCTTATGAGGCGCTCACCGCGCTCAT
CGCCGCCGAGGCCTTGTCGACCGAGTGGGACGGCGAGCCCTTCGAGGCCGATCACCATGTGCCCGGCACTGCCCTCGGCC
TCTTCGCCCACGAAGTCGCAAACGGCCGGTTCGAGGCCATCGAAGCCTGGTGCGCCGAGCACGGCATCGCCTTTGCGCGC
TGGTCGGGCGCCTATCCCTCGCAATGGGGCGCAGAGCGCGTGGTGTTCACGGGCGCAGGCGAACCCGTCTCCTACCCGGT
CGACGAAGACGATTATGTCTTGATCGGCCGCGCGGCGCTCGAACACCTGGCAAGCTTCGACGCCGTGCTCGCCTATTTCG
ATGCGGCCGACTTCGTTGTGCCGCCGCTCGTCTTGGGGGATGGCGCTCCTTTCCCCCAAGAGCCCTTGGCCCGGCCGGGC
TTTGATGAGACAGTCCCGTCATGA

Upstream 100 bases:

>100_bases
GCCGCCTATCCCGCTTGCGCGGCCCAAGCGCGCGCCCGCCTCGCCGCCCTCTGCGGCTGATCGCGCGAGGCCGACCACCT
TCCTTTCAGGAGCTCACACC

Downstream 100 bases:

>100_bases
CAGCGATTCCCACCGACCGCAGCAGCGCGCTGGCCGCGCTCGACCGGCTCGTTCCCCTCGCCCTGTCCGATACCGGGCAG
GCGCGGCGCGTCGCCCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVANGRFEAIEAWCAEHGIAFAR
WSGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAALEHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPG
FDETVPS

Sequences:

>Translated_167_residues
MANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVANGRFEAIEAWCAEHGIAFAR
WSGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAALEHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPG
FDETVPS
>Mature_166_residues
ANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVANGRFEAIEAWCAEHGIAFARW
SGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAALEHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPGF
DETVPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17693; Mature: 17561

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVA
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC
NGRFEAIEAWCAEHGIAFARWSGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAAL
CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHH
EHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPGFDETVPS
HHHHHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVA
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC
NGRFEAIEAWCAEHGIAFARWSGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAAL
CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHH
EHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPGFDETVPS
HHHHHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA