Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550678
Identifier: 148550678
GI number: 148550678
Start: 131487
End: 131990
Strand: Reverse
Name: 148550678
Synonym: Swit_5241
Alternate gene names: NA
Gene position: 131990-131487 (Counterclockwise)
Preceding gene: 148550679
Following gene: 148550677
Centisome position: 42.55
GC content: 66.27
Gene sequence:
>504_bases ATGGCAAACCGCGTTTCCGCGTCAATCACGCTCGGCGGCACCCTCTCATCACTTGCTTATGAGGCGCTCACCGCGCTCAT CGCCGCCGAGGCCTTGTCGACCGAGTGGGACGGCGAGCCCTTCGAGGCCGATCACCATGTGCCCGGCACTGCCCTCGGCC TCTTCGCCCACGAAGTCGCAAACGGCCGGTTCGAGGCCATCGAAGCCTGGTGCGCCGAGCACGGCATCGCCTTTGCGCGC TGGTCGGGCGCCTATCCCTCGCAATGGGGCGCAGAGCGCGTGGTGTTCACGGGCGCAGGCGAACCCGTCTCCTACCCGGT CGACGAAGACGATTATGTCTTGATCGGCCGCGCGGCGCTCGAACACCTGGCAAGCTTCGACGCCGTGCTCGCCTATTTCG ATGCGGCCGACTTCGTTGTGCCGCCGCTCGTCTTGGGGGATGGCGCTCCTTTCCCCCAAGAGCCCTTGGCCCGGCCGGGC TTTGATGAGACAGTCCCGTCATGA
Upstream 100 bases:
>100_bases GCCGCCTATCCCGCTTGCGCGGCCCAAGCGCGCGCCCGCCTCGCCGCCCTCTGCGGCTGATCGCGCGAGGCCGACCACCT TCCTTTCAGGAGCTCACACC
Downstream 100 bases:
>100_bases CAGCGATTCCCACCGACCGCAGCAGCGCGCTGGCCGCGCTCGACCGGCTCGTTCCCCTCGCCCTGTCCGATACCGGGCAG GCGCGGCGCGTCGCCCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVANGRFEAIEAWCAEHGIAFAR WSGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAALEHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPG FDETVPS
Sequences:
>Translated_167_residues MANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVANGRFEAIEAWCAEHGIAFAR WSGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAALEHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPG FDETVPS >Mature_166_residues ANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVANGRFEAIEAWCAEHGIAFARW SGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAALEHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPGF DETVPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17693; Mature: 17561
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVA CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC NGRFEAIEAWCAEHGIAFARWSGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAAL CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHH EHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPGFDETVPS HHHHHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ANRVSASITLGGTLSSLAYEALTALIAAEALSTEWDGEPFEADHHVPGTALGLFAHEVA CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC NGRFEAIEAWCAEHGIAFARWSGAYPSQWGAERVVFTGAGEPVSYPVDEDDYVLIGRAAL CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHH EHLASFDAVLAYFDAADFVVPPLVLGDGAPFPQEPLARPGFDETVPS HHHHHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA