Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550641
Identifier: 148550641
GI number: 148550641
Start: 93656
End: 93934
Strand: Reverse
Name: 148550641
Synonym: Swit_5202
Alternate gene names: NA
Gene position: 93934-93656 (Counterclockwise)
Preceding gene: 148550642
Following gene: 148550640
Centisome position: 30.28
GC content: 64.87
Gene sequence:
>279_bases ATGACGGGGCCGGCGCCCTACAGCTCGTCGCCGGTGTTCGATCAGGACACATTGCCGGCGGCGCTGCGCGCGCGCCATGA CACCAAGGCGGGGGTGTGGGGACTGATCCGCGTCCTCGAAGGTGAACTGAAGCTCACCTATCTCGAGCCGGCGTCGGAAG TCATCCTGAAGCCCGGTCATCCCGGTCTGATCGAACCGCAGCAGCCGCATTTCGTGACCCCGCTGGGTCCGATGCGGATG CAGGTCGAATTTTACCATGAGCCGCCCCCGAAGAGCTGA
Upstream 100 bases:
>100_bases CGACGGACGAAATCCTGGCGGCATGGGGCGAAGCCTATTGGTTCCTCGCCGACATTCTGATCGCGCGCGAGGCCGAGCTT TATGACGAGGCCCAGGCCGC
Downstream 100 bases:
>100_bases TGATCGCGGACGATTTCACTCTTGCGCGCGTGATCCATGTCGTCGCCGTCCTGTTCTGGATCGGCGGCGTCGCCTTCGTG ACGCTGGTGCTGATGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTGPAPYSSSPVFDQDTLPAALRARHDTKAGVWGLIRVLEGELKLTYLEPASEVILKPGHPGLIEPQQPHFVTPLGPMRM QVEFYHEPPPKS
Sequences:
>Translated_92_residues MTGPAPYSSSPVFDQDTLPAALRARHDTKAGVWGLIRVLEGELKLTYLEPASEVILKPGHPGLIEPQQPHFVTPLGPMRM QVEFYHEPPPKS >Mature_91_residues TGPAPYSSSPVFDQDTLPAALRARHDTKAGVWGLIRVLEGELKLTYLEPASEVILKPGHPGLIEPQQPHFVTPLGPMRMQ VEFYHEPPPKS
Specific function: Unknown
COG id: COG3615
COG function: function code P; Uncharacterized protein/domain, possibly involved in tellurite resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10169; Mature: 10038
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPAPYSSSPVFDQDTLPAALRARHDTKAGVWGLIRVLEGELKLTYLEPASEVILKPGH CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCEEECCCC PGLIEPQQPHFVTPLGPMRMQVEFYHEPPPKS CCCCCCCCCCEECCCCCEEEEEEEECCCCCCC >Mature Secondary Structure TGPAPYSSSPVFDQDTLPAALRARHDTKAGVWGLIRVLEGELKLTYLEPASEVILKPGH CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCEEECCCC PGLIEPQQPHFVTPLGPMRMQVEFYHEPPPKS CCCCCCCCCCEECCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA