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The map label for this gene is parB [H]

Identifier: 148550635

GI number: 148550635

Start: 84783

End: 86432

Strand: Reverse

Name: parB [H]

Synonym: Swit_5196

Alternate gene names: 148550635

Gene position: 86432-84783 (Counterclockwise)

Preceding gene: 148550637

Following gene: 148550634

Centisome position: 27.86

GC content: 67.52

Gene sequence:

>1650_bases
TTGAGCACTCCAGAACCGAGCTGCGCCACGCTGCCGCTCTCGCGCATCGTCAAGGGCGACAATCCGCGTCGCTATTTCGA
CCGGAAAAAGCACGACGATCTCGTCGCTTCGATCCGCATTCGTGGCATCCTGCAGCCGATCCTGGTTCGTCCGGCACCCA
GCTCGGACGATAGCTACGCCATCGTCGCCGGCGAGCGCCGGTACAGGGCGGCGCTGGAAGCGTTCGGTTCCGACGGCGAG
GTGCCCGCGATCATCCGCGAGATGACCGACCAGGAGGCCCTCGAGGCGGCAATCGACGAGAACGACAATCGCGACGACGC
CTCGGAGACGGAACAAGCGGACGCGGCCGTTCGCGTGCTCGCCGCATGCCGTAACGATCGCGCCGAGGCCGCGCGGCGTC
TGGGCTGGTCGCGGGCCAAGCTCGATCGCCGCCTGGCGCTCGCCGAACTCTCCGAGGCGGTCAAACTTGCGCTCGACGAA
CGGCGGATCAAGGTCGGCCATGCTGAACTCCTCGCCGCGATCCCCGCCGACAAGCAGGACAAGGCCCTCGAGACCATCCT
GGGCTCCGGTCTCGATGTCAGCAAGACCCGCGACCTCCTCATGCGCGTCACCCAGAATCTCGGCGCGGCGTGCTTCGACA
AGACCGACTGCACCACCTGTCCGTTCAACTCGGCCGCACAGCGAACCCTGTTCGAAACCCATGTCGATGACGGCCATTGC
ACCAATCCGGGCTGCTTCCAGCTCAAGACCGAGGCGTGGGAAACCGCCCAACGCGAGGAGCAGGAGCGCGCCGCTGCCGC
GGCCAAGGCAGCGGCGCCGCCGCCCGCAGACGACATCGAGGACGAGGAACAGGATGACGACGAAGACGACGCCATCGACC
AGAGCCCGCCGGAAGCGGACGATCAGGAAGAGGCAGGCGACCGCGCCTCGCCTTCGGGCACGGCAGCCACGCCCGCATCC
ACGCCGCCCACTGTCGTTCAATCCAAGGGCAGTATAGTCCAGGCGCACAAGCCAACGGTCACCGTCAAGTCGATCGCCGG
CCGCACCAGCGACCTGCGCGAGGCGACGTGGCGCACCGCGCTCGCCCGTGCGCTCGCCGGCAATGCCGCGCACGCCCAGA
CCGCGATCCTGGTCGCCGCGATGTCGGGCACGCTCTCGCAGATCAAACCGGAGACGCTGAAGGCCCGCGCCGGCCTGCTG
GTGGGCGCCTCGTTCCCGGAGCTCGCCTACAGCGCCAAGATCGCGGAGATCCGCGCGTTGCCCGAGGCTCAGGCCGAGAA
GGTGCTTTCCGCGATCGGCGCCGCTTATGCCAAGGATGTGCTCACCTTCGGCCATGTCGCCGACCTCGCCCGGACCTTCG
ACGTCGACCTGCGCGATGTCTGGCAGGTCGATAAGACATTCCTCGAGCGCTACACCAAGGACGAACTCAGGTTCATCGCC
CAGGAGTGCGGCCTCGTCGCGCATGTAAGCGAAAAGGCGTTCGCCAAGCTGCTCAGTGCGAAGAAGGCCGACCTGATCGC
TGGCATGCTCAACGCCACCGGCTTCGACTGGGCCGGCCGCCTGCCGAGCTCGATGACGCTCGACGGCCAATATGGCCCGC
CCCCCGTGCCGGCCCAAGCCGAAGAGCCGCTCTCCCGACAAGCCGCCTGA

Upstream 100 bases:

>100_bases
GGCCGCGCGAGGGGAGGGGGAAGGCGAGCGTGAGGCTCGCAGAACCGAAGGCACGCGACCCCGGCCGACCCGGCCTTCCC
ATTCCACGAGGAGATCCGTC

Downstream 100 bases:

>100_bases
CCCGCTTCTCCAATCTCACACAAGGACCGAACGCCATGCTGATCTCCAGCCTTCTTCCTATGCTCGCCCGCTACTCGCTC
GGCTTCGATCTTGTCGCCGG

Product: ParB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MSTPEPSCATLPLSRIVKGDNPRRYFDRKKHDDLVASIRIRGILQPILVRPAPSSDDSYAIVAGERRYRAALEAFGSDGE
VPAIIREMTDQEALEAAIDENDNRDDASETEQADAAVRVLAACRNDRAEAARRLGWSRAKLDRRLALAELSEAVKLALDE
RRIKVGHAELLAAIPADKQDKALETILGSGLDVSKTRDLLMRVTQNLGAACFDKTDCTTCPFNSAAQRTLFETHVDDGHC
TNPGCFQLKTEAWETAQREEQERAAAAAKAAAPPPADDIEDEEQDDDEDDAIDQSPPEADDQEEAGDRASPSGTAATPAS
TPPTVVQSKGSIVQAHKPTVTVKSIAGRTSDLREATWRTALARALAGNAAHAQTAILVAAMSGTLSQIKPETLKARAGLL
VGASFPELAYSAKIAEIRALPEAQAEKVLSAIGAAYAKDVLTFGHVADLARTFDVDLRDVWQVDKTFLERYTKDELRFIA
QECGLVAHVSEKAFAKLLSAKKADLIAGMLNATGFDWAGRLPSSMTLDGQYGPPPVPAQAEEPLSRQAA

Sequences:

>Translated_549_residues
MSTPEPSCATLPLSRIVKGDNPRRYFDRKKHDDLVASIRIRGILQPILVRPAPSSDDSYAIVAGERRYRAALEAFGSDGE
VPAIIREMTDQEALEAAIDENDNRDDASETEQADAAVRVLAACRNDRAEAARRLGWSRAKLDRRLALAELSEAVKLALDE
RRIKVGHAELLAAIPADKQDKALETILGSGLDVSKTRDLLMRVTQNLGAACFDKTDCTTCPFNSAAQRTLFETHVDDGHC
TNPGCFQLKTEAWETAQREEQERAAAAAKAAAPPPADDIEDEEQDDDEDDAIDQSPPEADDQEEAGDRASPSGTAATPAS
TPPTVVQSKGSIVQAHKPTVTVKSIAGRTSDLREATWRTALARALAGNAAHAQTAILVAAMSGTLSQIKPETLKARAGLL
VGASFPELAYSAKIAEIRALPEAQAEKVLSAIGAAYAKDVLTFGHVADLARTFDVDLRDVWQVDKTFLERYTKDELRFIA
QECGLVAHVSEKAFAKLLSAKKADLIAGMLNATGFDWAGRLPSSMTLDGQYGPPPVPAQAEEPLSRQAA
>Mature_548_residues
STPEPSCATLPLSRIVKGDNPRRYFDRKKHDDLVASIRIRGILQPILVRPAPSSDDSYAIVAGERRYRAALEAFGSDGEV
PAIIREMTDQEALEAAIDENDNRDDASETEQADAAVRVLAACRNDRAEAARRLGWSRAKLDRRLALAELSEAVKLALDER
RIKVGHAELLAAIPADKQDKALETILGSGLDVSKTRDLLMRVTQNLGAACFDKTDCTTCPFNSAAQRTLFETHVDDGHCT
NPGCFQLKTEAWETAQREEQERAAAAAKAAAPPPADDIEDEEQDDDEDDAIDQSPPEADDQEEAGDRASPSGTAATPAST
PPTVVQSKGSIVQAHKPTVTVKSIAGRTSDLREATWRTALARALAGNAAHAQTAILVAAMSGTLSQIKPETLKARAGLLV
GASFPELAYSAKIAEIRALPEAQAEKVLSAIGAAYAKDVLTFGHVADLARTFDVDLRDVWQVDKTFLERYTKDELRFIAQ
ECGLVAHVSEKAFAKLLSAKKADLIAGMLNATGFDWAGRLPSSMTLDGQYGPPPVPAQAEEPLSRQAA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 59082; Mature: 58950

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPEPSCATLPLSRIVKGDNPRRYFDRKKHDDLVASIRIRGILQPILVRPAPSSDDSYA
CCCCCCCCHHCCHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
IVAGERRYRAALEAFGSDGEVPAIIREMTDQEALEAAIDENDNRDDASETEQADAAVRVL
EEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AACRNDRAEAARRLGWSRAKLDRRLALAELSEAVKLALDERRIKVGHAELLAAIPADKQD
HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KALETILGSGLDVSKTRDLLMRVTQNLGAACFDKTDCTTCPFNSAAQRTLFETHVDDGHC
HHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
TNPGCFQLKTEAWETAQREEQERAAAAAKAAAPPPADDIEDEEQDDDEDDAIDQSPPEAD
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DQEEAGDRASPSGTAATPASTPPTVVQSKGSIVQAHKPTVTVKSIAGRTSDLREATWRTA
CHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCEEHHHHHCCCHHHHHHHHHHH
LARALAGNAAHAQTAILVAAMSGTLSQIKPETLKARAGLLVGASFPELAYSAKIAEIRAL
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHCC
PEAQAEKVLSAIGAAYAKDVLTFGHVADLARTFDVDLRDVWQVDKTFLERYTKDELRFIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QECGLVAHVSEKAFAKLLSAKKADLIAGMLNATGFDWAGRLPSSMTLDGQYGPPPVPAQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
EEPLSRQAA
CCCHHHCCC
>Mature Secondary Structure 
STPEPSCATLPLSRIVKGDNPRRYFDRKKHDDLVASIRIRGILQPILVRPAPSSDDSYA
CCCCCCCHHCCHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
IVAGERRYRAALEAFGSDGEVPAIIREMTDQEALEAAIDENDNRDDASETEQADAAVRVL
EEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AACRNDRAEAARRLGWSRAKLDRRLALAELSEAVKLALDERRIKVGHAELLAAIPADKQD
HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KALETILGSGLDVSKTRDLLMRVTQNLGAACFDKTDCTTCPFNSAAQRTLFETHVDDGHC
HHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
TNPGCFQLKTEAWETAQREEQERAAAAAKAAAPPPADDIEDEEQDDDEDDAIDQSPPEAD
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DQEEAGDRASPSGTAATPASTPPTVVQSKGSIVQAHKPTVTVKSIAGRTSDLREATWRTA
CHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCEEHHHHHCCCHHHHHHHHHHH
LARALAGNAAHAQTAILVAAMSGTLSQIKPETLKARAGLLVGASFPELAYSAKIAEIRAL
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHCC
PEAQAEKVLSAIGAAYAKDVLTFGHVADLARTFDVDLRDVWQVDKTFLERYTKDELRFIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QECGLVAHVSEKAFAKLLSAKKADLIAGMLNATGFDWAGRLPSSMTLDGQYGPPPVPAQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
EEPLSRQAA
CCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12704232; 9683477 [H]