Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550626
Identifier: 148550626
GI number: 148550626
Start: 75919
End: 76245
Strand: Reverse
Name: 148550626
Synonym: Swit_5187
Alternate gene names: NA
Gene position: 76245-75919 (Counterclockwise)
Preceding gene: 148550627
Following gene: 148550625
Centisome position: 24.58
GC content: 66.06
Gene sequence:
>327_bases ATGAGCCGCTACGAACTGAAGCCGAGGCCCGGAAACGGTGTCATCAAGGCGGTGATCGGATGGGATCGCCCGCTGCAGAG CTTCTTCGCGCAAGTCTTCACGCCCACCGAAGACGAGCCCGACGAGGGCGAAGCAACGATCTGGCTCGGCACGGAGCCGG GGGAACTGCCGACCCCCGAGGCCGCGATCCGCGTCGTCGAAGCCTATGCGGACATTCCCGAAACGCTGGCGGCGTCCCTC GCCGCCGACCGGCACGCGACCATCGGGATGGTGGACGGCGTCCACCAGACGCGAGCCAAATTGAGTCTCTTCGGCACTCG CTCCTAA
Upstream 100 bases:
>100_bases GGAGCGGCGCCCCGCGTGCCGCCAGGGCCGTTCGCAAGGCACTGCGCAGCGCCGAAGGCGCGGCCCGGCACGTCAACCAT CGTATCCGCAGGAGCCAGAC
Downstream 100 bases:
>100_bases ACCCCCCGAGGCCGCTGAAGCGGGCCTCGGAAATGGCGCTTGCGCGCCTGCTCGGCCGAACGGCCGAGGAGGGGAGTGGG GAAGGAGGAAGTTGGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSRYELKPRPGNGVIKAVIGWDRPLQSFFAQVFTPTEDEPDEGEATIWLGTEPGELPTPEAAIRVVEAYADIPETLAASL AADRHATIGMVDGVHQTRAKLSLFGTRS
Sequences:
>Translated_108_residues MSRYELKPRPGNGVIKAVIGWDRPLQSFFAQVFTPTEDEPDEGEATIWLGTEPGELPTPEAAIRVVEAYADIPETLAASL AADRHATIGMVDGVHQTRAKLSLFGTRS >Mature_107_residues SRYELKPRPGNGVIKAVIGWDRPLQSFFAQVFTPTEDEPDEGEATIWLGTEPGELPTPEAAIRVVEAYADIPETLAASLA ADRHATIGMVDGVHQTRAKLSLFGTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11735; Mature: 11604
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYELKPRPGNGVIKAVIGWDRPLQSFFAQVFTPTEDEPDEGEATIWLGTEPGELPTPE CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCH AAIRVVEAYADIPETLAASLAADRHATIGMVDGVHQTRAKLSLFGTRS HHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCHHHHHHHEEEEECCC >Mature Secondary Structure SRYELKPRPGNGVIKAVIGWDRPLQSFFAQVFTPTEDEPDEGEATIWLGTEPGELPTPE CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCH AAIRVVEAYADIPETLAASLAADRHATIGMVDGVHQTRAKLSLFGTRS HHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA