Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550622
Identifier: 148550622
GI number: 148550622
Start: 73809
End: 74201
Strand: Reverse
Name: 148550622
Synonym: Swit_5183
Alternate gene names: NA
Gene position: 74201-73809 (Counterclockwise)
Preceding gene: 148550623
Following gene: 148550621
Centisome position: 23.92
GC content: 60.81
Gene sequence:
>393_bases ATGTCGCACTGCTATTATCACGCGCTCAGCTCCGTGAAGCGCTGGGGCGGCGAGGCCGAGGACTATCTGCCCCTCCACCA ATGGTTCGACGAGTCGAAGAAGATCGTCGCGGACCCCCGCCACCGTTCCTTGCGCCACCATGCAGAGGGCATATTCATGC TCGAGACGGTCTTCGGCGTGACGATCCGAAACGCTGATGGACGGGATATCCCGGTGCGGTTGATCGGGGAACAGCACGTC CAAGAGGATCTTGGCCGTATTCCCTCCTTCGCTGACTGGGCGCGGCTCATCCAGCCGATGCCGTGGATTCTTCGGGGCAA CCCGGCCGGGTCACCGGGATTGGATCCAGATGTTGAAAACATGTGCCACGTTGCTCCAGCGACGCAATTGTAG
Upstream 100 bases:
>100_bases TTATGGCACCATCGCCATAGACGTCGCCAGCGGCGCGGTGACCCTCACGCACAACAGCCGGTTCATCGACTATGACACGA CCGAGGCGGAGCTATAGGCG
Downstream 100 bases:
>100_bases TAACATGGCTACATGCCCAAGTGCGAGGCTCTTATGAACATGACAACCATTTCAAGTCGTGACTTCAACCAAGGTGCGAG CCGGGCAAAGAAAGCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSHCYYHALSSVKRWGGEAEDYLPLHQWFDESKKIVADPRHRSLRHHAEGIFMLETVFGVTIRNADGRDIPVRLIGEQHV QEDLGRIPSFADWARLIQPMPWILRGNPAGSPGLDPDVENMCHVAPATQL
Sequences:
>Translated_130_residues MSHCYYHALSSVKRWGGEAEDYLPLHQWFDESKKIVADPRHRSLRHHAEGIFMLETVFGVTIRNADGRDIPVRLIGEQHV QEDLGRIPSFADWARLIQPMPWILRGNPAGSPGLDPDVENMCHVAPATQL >Mature_129_residues SHCYYHALSSVKRWGGEAEDYLPLHQWFDESKKIVADPRHRSLRHHAEGIFMLETVFGVTIRNADGRDIPVRLIGEQHVQ EDLGRIPSFADWARLIQPMPWILRGNPAGSPGLDPDVENMCHVAPATQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14776; Mature: 14645
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHCYYHALSSVKRWGGEAEDYLPLHQWFDESKKIVADPRHRSLRHHAEGIFMLETVFGV CCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHCCHHHHHHHHHH TIRNADGRDIPVRLIGEQHVQEDLGRIPSFADWARLIQPMPWILRGNPAGSPGLDPDVEN EEECCCCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHH MCHVAPATQL HHCCCCCCCC >Mature Secondary Structure SHCYYHALSSVKRWGGEAEDYLPLHQWFDESKKIVADPRHRSLRHHAEGIFMLETVFGV CHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHCCHHHHHHHHHH TIRNADGRDIPVRLIGEQHVQEDLGRIPSFADWARLIQPMPWILRGNPAGSPGLDPDVEN EEECCCCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHH MCHVAPATQL HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA