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The map label for this gene is 148550620

Identifier: 148550620

GI number: 148550620

Start: 73105

End: 73515

Strand: Reverse

Name: 148550620

Synonym: Swit_5181

Alternate gene names: NA

Gene position: 73515-73105 (Counterclockwise)

Preceding gene: 148550621

Following gene: 148550619

Centisome position: 23.7

GC content: 58.39

Gene sequence:

>411_bases
ATGTTTCTCCTAGATACGAACGTCATCTCCGCGCTTCGCAGACCTGAACGGCTGCCTCCCGAGGTGACATCCTGGGCGGA
CGAAGCCGATGTCGACCAGTGCTACATTTCGGTCATATCGGTCCTCGAAATTGAACTAGGCATTTTAGCCAAGGAGCGCG
TCGATGCTTCTACCGGCCGCATTTTGCGGACATGGTTTCAAACCGACGTGCTGGCGGCGTTCGATGATCGCATCATCCCG
ATCGACACCGAAGTCGCGATGCGGTGCGCCGCATTGCATGTGCCGGATCCCCAACCGGAGCGGGATGGTCTGATCGCCGC
GACGGCGGTTGTGCATTCGATGACGCTTGTTACCCGCAACGTTGCGGATTTCGAGCGCACGCCGGCCAACCTCCTAAATC
CCTGGCATTGA

Upstream 100 bases:

>100_bases
GCAGCTTGCTCGCGACCTTGGCGCAAGCCGGCGACGATGCTGACTTTGACTTCGAACCCAGCAAGCTGGATCATATCGTC
CGACCGGCGGATCTGGATTG

Downstream 100 bases:

>100_bases
ACTGGCGCTGAGCCGAAGTTGATTTGAGGTGACAGACCATGAAGTCTCGGCACAAAGATCCGAAAGCAGGCGACACATCC
AGGCGGGAAGTGCTGCGCCT

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MFLLDTNVISALRRPERLPPEVTSWADEADVDQCYISVISVLEIELGILAKERVDASTGRILRTWFQTDVLAAFDDRIIP
IDTEVAMRCAALHVPDPQPERDGLIAATAVVHSMTLVTRNVADFERTPANLLNPWH

Sequences:

>Translated_136_residues
MFLLDTNVISALRRPERLPPEVTSWADEADVDQCYISVISVLEIELGILAKERVDASTGRILRTWFQTDVLAAFDDRIIP
IDTEVAMRCAALHVPDPQPERDGLIAATAVVHSMTLVTRNVADFERTPANLLNPWH
>Mature_136_residues
MFLLDTNVISALRRPERLPPEVTSWADEADVDQCYISVISVLEIELGILAKERVDASTGRILRTWFQTDVLAAFDDRIIP
IDTEVAMRCAALHVPDPQPERDGLIAATAVVHSMTLVTRNVADFERTPANLLNPWH

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15220; Mature: 15220

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLDTNVISALRRPERLPPEVTSWADEADVDQCYISVISVLEIELGILAKERVDASTGR
CEEECHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ILRTWFQTDVLAAFDDRIIPIDTEVAMRCAALHVPDPQPERDGLIAATAVVHSMTLVTRN
HHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VADFERTPANLLNPWH
HHHHHCCCHHHCCCCC
>Mature Secondary Structure
MFLLDTNVISALRRPERLPPEVTSWADEADVDQCYISVISVLEIELGILAKERVDASTGR
CEEECHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ILRTWFQTDVLAAFDDRIIPIDTEVAMRCAALHVPDPQPERDGLIAATAVVHSMTLVTRN
HHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VADFERTPANLLNPWH
HHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]