Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550613

Identifier: 148550613

GI number: 148550613

Start: 68443

End: 68994

Strand: Reverse

Name: 148550613

Synonym: Swit_5174

Alternate gene names: NA

Gene position: 68994-68443 (Counterclockwise)

Preceding gene: 148550614

Following gene: 148550610

Centisome position: 22.24

GC content: 68.84

Gene sequence:

>552_bases
ATGAATATCGGTTCGATCAAGCAGAATGACGCCGGCATTTTCGTCGGCAAGATCGCGACGCTGACGATTGCCATGACGAT
CGCGCTGCGCGAGGTGCACTCGGCCAATCCGAAGGCGCCGAAGTACGAGGTGCTGGCGCTGTCGGCATCGCGGGCGTGGG
TGCAGGTGGGTGCGCTGTTCGAGCTTTTCTCTAACGGCACGGGCGAGGCGTTCCTCAACGGCAAGATCGAGGATCCGAGC
CTGGCCGCGCCGCTCTACGTGTCGGCGTTCCGTCAGGAGGACGGCAGCTACAACGTCGTGTGGTCGCGCCCGACGCGCCG
CCGCGACCTCGCCTCGGAGATGGCGCCCAAGGCCGACGAGGGCCTGCCGCCGCTGCCCGGCGCCGACGAGACCGCCGGCC
CCGCCACACAGGGCACCGAAGCCGGCCTCGGACAGTCCTCCGCAAGCCATGCCTTCGGCTGCGAGCCGCAGCAGGAACAG
CAGCAGGAAGGCGGACGCCGGCAGCGTCGTCAGCGCGCGCCGGAGCAGGCGGAGGAGCCCGAAACCGTCTGA

Upstream 100 bases:

>100_bases
GCTTGCGCGCCTGCTCGGCCGAACGGCCGAGGAGGGGAGTGGGGAAGGAGGAAGTTGGCTCGGACACAGTGTTCGAGACC
GGCTTTCAGGAGACTTTCCC

Downstream 100 bases:

>100_bases
ACCTCCCCGTGCCCGGTCCCACACCTCCAGGCCGGGCACACCCTCCCGCTGGGCTCGCTTCGCTTCTCGCGAAGCGGGCC
CTGTTTTCATTTACCCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNIGSIKQNDAGIFVGKIATLTIAMTIALREVHSANPKAPKYEVLALSASRAWVQVGALFELFSNGTGEAFLNGKIEDPS
LAAPLYVSAFRQEDGSYNVVWSRPTRRRDLASEMAPKADEGLPPLPGADETAGPATQGTEAGLGQSSASHAFGCEPQQEQ
QQEGGRRQRRQRAPEQAEEPETV

Sequences:

>Translated_183_residues
MNIGSIKQNDAGIFVGKIATLTIAMTIALREVHSANPKAPKYEVLALSASRAWVQVGALFELFSNGTGEAFLNGKIEDPS
LAAPLYVSAFRQEDGSYNVVWSRPTRRRDLASEMAPKADEGLPPLPGADETAGPATQGTEAGLGQSSASHAFGCEPQQEQ
QQEGGRRQRRQRAPEQAEEPETV
>Mature_183_residues
MNIGSIKQNDAGIFVGKIATLTIAMTIALREVHSANPKAPKYEVLALSASRAWVQVGALFELFSNGTGEAFLNGKIEDPS
LAAPLYVSAFRQEDGSYNVVWSRPTRRRDLASEMAPKADEGLPPLPGADETAGPATQGTEAGLGQSSASHAFGCEPQQEQ
QQEGGRRQRRQRAPEQAEEPETV

Specific function: Unknown

COG id: COG5489

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19620; Mature: 19620

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGSIKQNDAGIFVGKIATLTIAMTIALREVHSANPKAPKYEVLALSASRAWVQVGALF
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHH
ELFSNGTGEAFLNGKIEDPSLAAPLYVSAFRQEDGSYNVVWSRPTRRRDLASEMAPKADE
HHHHCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCC
GLPPLPGADETAGPATQGTEAGLGQSSASHAFGCEPQQEQQQEGGRRQRRQRAPEQAEEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
ETV
CCC
>Mature Secondary Structure
MNIGSIKQNDAGIFVGKIATLTIAMTIALREVHSANPKAPKYEVLALSASRAWVQVGALF
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHH
ELFSNGTGEAFLNGKIEDPSLAAPLYVSAFRQEDGSYNVVWSRPTRRRDLASEMAPKADE
HHHHCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCC
GLPPLPGADETAGPATQGTEAGLGQSSASHAFGCEPQQEQQQEGGRRQRRQRAPEQAEEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
ETV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA