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The map label for this gene is fyuA [H]

Identifier: 148550568

GI number: 148550568

Start: 15110

End: 17425

Strand: Reverse

Name: fyuA [H]

Synonym: Swit_5129

Alternate gene names: 148550568

Gene position: 17425-15110 (Counterclockwise)

Preceding gene: 148550571

Following gene: 148550567

Centisome position: 5.62

GC content: 62.95

Gene sequence:

>2316_bases
ATGGGGTTCCGTCATTCCATTCATGTTTCTGCGCTCGCGTCCGTTGCCACTCTGGCTCTGGCGACTGCTGCCTTTTCCGC
CCCGGCGATGGCGCAGGAAGCGGCGGCCGACGACAGCGGCGCGATCATCGTCACGGCCCGTCGGCGCGAAGAAAGCCTTA
TCGATGTTCCGATTTCGGTGACGGCGATCAGTGGCGACGCCCTTCAGAAATCCGGCGCGATCGACATCACCGACATCAGC
CAGTCGGTCCCCAACGTCACCCTGGAAACCTCGCGCGGCACCAACTCGACGCTGACGGCGTTCATTCGCGGCGTGGGCCA
GCAGGATCCGGTCGCCGGTTTCGAGGCAGGTGTGGGCCTCTATCTTGATGACGTGTATCTGAACCGTCCGCAGGCGGCCG
TTCTCGACATTTATGATGTGGAGCGGGTCGAGGTGCTGCGCGGTCCGCAGGGCACGCTTTATGGCCGCAACACGATCGGC
GGCGCGGTCAAATATGTGACGAAGCGTCTGACCACGGACCCCACTCTGTCGGTGCGTGGCACCTATGGCAGCTATGATCA
GGCCGATGGCGTCATCACGGCATCGACGCCGGTCGGCGATGGGACGCTGAAGTTCGGCGGGGCGCTGGCGCGCCTGTCGC
GTGGCGGTTTCGGCGACAATCTGACGACCGGCCGGGAAAACTATAACAAGGACGTCTGGGCAGGGCGGTTGAGCGCGCAG
GCCGATGGCGAGGGTTTCTTTGTCCGACTGACCGGCGATTACACCAAGGACAAGAGCGAACCGCGCGGCGGCCATCGCCT
GATCCCCGGCCTTTTCAGCGGCGCGCCGGTGCTGAACGATGTCTACGATACGCGTGCTGGCCTGCTCGATCCCAAGCAGG
ACGTAGAGGCCTATGGCGTTTCCCTGTTCGGCGAATTCGAAGTCACGGACGGTTTCACGCTGCGTTCGATCACTGCCTGG
CGCAAGGACAACAGCGCTACGCCGATCGATTTCGACAGCCTGGCGGCGGTCGATGGCGATGTGCCCGCCTTCCATAACAA
CCGTCAGCTTTCGCAGGAAATCCAGCTGCTGGTGAGCACCGGCAACCTGAACGGCCTGATCGGCGGCTATTTCCTCGACG
CCAAGGCGCGCACCGTGTTCGACGCGCGCCTGCCCGGCGGGGTCACGCCCCTGACCTTCGGCGATGTGGGCACCGAAACC
TTCGCGATCTTCGGCGACTTCACCTACGACTTCACGCCGCAACTCAGCCTGTCGGTCGGCGGTCGCTATACCTGGGATGA
ACGCACGTCGCAGATCCTGCGCCGCACCTATCTGGGTGGCGGATCGCCCTTCTTCGGCGGTACGGGGACGCTGTTTGCCA
CCACCTCCGATTTCCGCGGCTCGCAGACGTTCAAGGAATTCACGCCGCGCGCCTCGCTGTCGTTCAAGCCGACCCAGGAC
CAGACGCTCTATGCAAGCTATGCCAAGGGCTTCAAGGGCGGCGGCTTCGACCCGCGCGGCCAATCCACCGCATGCCGCAC
ACCCACCGGCGGCACGTGCACCCCGCAGCAGGTGTTCGATTTCCTCTCGTTCGATCCGGAAACGGTCGAAACCTATGAAG
TCGGTTACAAGGCGTCCTATGGCCGCCGCCTGACCATCGCATTGTCGGGTTTCTATTCCGATTATACCGATGTGCAGGTG
CCCGGTTCGATCGGCACCACGGTCAATGGTCAGCAGACGTTCGTGGGCATCACCACCAATGCGGGCAAGGCGCGCATCCA
GGGTATCGAGTTCGAAGGAAACCTGCTGGTCGCCAAGGATATCGGTGCGCCTGGCAGCCGCCTGAACCTCAACTGGGCGG
GCGGTTATATCGACGCCAAGTACAAGCAGTTCATCGATTCGCGCGGTATCGACGTCGCCAACCGGCGCGCGTTCCAGAAC
ACGCCGAAATGGACCGCTTCGGGCACGCTGGCTTATTCGATCCCGGCCTTTGGCGGCGATATTTCGACCAGCACCACGGT
TTCCTATCGCAGCAAGTCGCAGCAGTTCGAACTGCGCACGCCGGGTCTGGATCAGGCCGGCTATGCGCTGTGGGATGCCA
GCATCGTGTGGACGTCGGAAGGCGGCCGTTATTCGCTGGGCGTGCATGGCCGCAACCTGACCGACAAGCAGTATATCGTG
TCGGGCAACAACTTCCTCAGCCAGAATCCGGACACCGGCAATTTCAATCGCAACGCTGCGGGCGCGCTGATCCCGACGCT
GGGCCGCGAAGGCGTGCTGACTGCCTATTACGGCAATCCGCGGCAGGTGTTCGTGTCCGCTGGCGTGAAGTTCTGA

Upstream 100 bases:

>100_bases
GGCCATTTTTTGAAGTTGAAAGGTGGTTCGACTTTCATTATCGAGTCATTCAACACAGGGCAAGCCACCAATGGGCTGCC
GTATTTCAGGAGAGGATCGC

Downstream 100 bases:

>100_bases
TCGTCCGGCAACGGACTGTGATCGGGCAAGGGGGTATCGGGGCGGCCATGTCCGTCCCGATACCGATTGCTCGCAATAAG
TGGCGGTCGCACCTGTTGGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: IPR65; IRPC [H]

Number of amino acids: Translated: 771; Mature: 770

Protein sequence:

>771_residues
MGFRHSIHVSALASVATLALATAAFSAPAMAQEAAADDSGAIIVTARRREESLIDVPISVTAISGDALQKSGAIDITDIS
QSVPNVTLETSRGTNSTLTAFIRGVGQQDPVAGFEAGVGLYLDDVYLNRPQAAVLDIYDVERVEVLRGPQGTLYGRNTIG
GAVKYVTKRLTTDPTLSVRGTYGSYDQADGVITASTPVGDGTLKFGGALARLSRGGFGDNLTTGRENYNKDVWAGRLSAQ
ADGEGFFVRLTGDYTKDKSEPRGGHRLIPGLFSGAPVLNDVYDTRAGLLDPKQDVEAYGVSLFGEFEVTDGFTLRSITAW
RKDNSATPIDFDSLAAVDGDVPAFHNNRQLSQEIQLLVSTGNLNGLIGGYFLDAKARTVFDARLPGGVTPLTFGDVGTET
FAIFGDFTYDFTPQLSLSVGGRYTWDERTSQILRRTYLGGGSPFFGGTGTLFATTSDFRGSQTFKEFTPRASLSFKPTQD
QTLYASYAKGFKGGGFDPRGQSTACRTPTGGTCTPQQVFDFLSFDPETVETYEVGYKASYGRRLTIALSGFYSDYTDVQV
PGSIGTTVNGQQTFVGITTNAGKARIQGIEFEGNLLVAKDIGAPGSRLNLNWAGGYIDAKYKQFIDSRGIDVANRRAFQN
TPKWTASGTLAYSIPAFGGDISTSTTVSYRSKSQQFELRTPGLDQAGYALWDASIVWTSEGGRYSLGVHGRNLTDKQYIV
SGNNFLSQNPDTGNFNRNAAGALIPTLGREGVLTAYYGNPRQVFVSAGVKF

Sequences:

>Translated_771_residues
MGFRHSIHVSALASVATLALATAAFSAPAMAQEAAADDSGAIIVTARRREESLIDVPISVTAISGDALQKSGAIDITDIS
QSVPNVTLETSRGTNSTLTAFIRGVGQQDPVAGFEAGVGLYLDDVYLNRPQAAVLDIYDVERVEVLRGPQGTLYGRNTIG
GAVKYVTKRLTTDPTLSVRGTYGSYDQADGVITASTPVGDGTLKFGGALARLSRGGFGDNLTTGRENYNKDVWAGRLSAQ
ADGEGFFVRLTGDYTKDKSEPRGGHRLIPGLFSGAPVLNDVYDTRAGLLDPKQDVEAYGVSLFGEFEVTDGFTLRSITAW
RKDNSATPIDFDSLAAVDGDVPAFHNNRQLSQEIQLLVSTGNLNGLIGGYFLDAKARTVFDARLPGGVTPLTFGDVGTET
FAIFGDFTYDFTPQLSLSVGGRYTWDERTSQILRRTYLGGGSPFFGGTGTLFATTSDFRGSQTFKEFTPRASLSFKPTQD
QTLYASYAKGFKGGGFDPRGQSTACRTPTGGTCTPQQVFDFLSFDPETVETYEVGYKASYGRRLTIALSGFYSDYTDVQV
PGSIGTTVNGQQTFVGITTNAGKARIQGIEFEGNLLVAKDIGAPGSRLNLNWAGGYIDAKYKQFIDSRGIDVANRRAFQN
TPKWTASGTLAYSIPAFGGDISTSTTVSYRSKSQQFELRTPGLDQAGYALWDASIVWTSEGGRYSLGVHGRNLTDKQYIV
SGNNFLSQNPDTGNFNRNAAGALIPTLGREGVLTAYYGNPRQVFVSAGVKF
>Mature_770_residues
GFRHSIHVSALASVATLALATAAFSAPAMAQEAAADDSGAIIVTARRREESLIDVPISVTAISGDALQKSGAIDITDISQ
SVPNVTLETSRGTNSTLTAFIRGVGQQDPVAGFEAGVGLYLDDVYLNRPQAAVLDIYDVERVEVLRGPQGTLYGRNTIGG
AVKYVTKRLTTDPTLSVRGTYGSYDQADGVITASTPVGDGTLKFGGALARLSRGGFGDNLTTGRENYNKDVWAGRLSAQA
DGEGFFVRLTGDYTKDKSEPRGGHRLIPGLFSGAPVLNDVYDTRAGLLDPKQDVEAYGVSLFGEFEVTDGFTLRSITAWR
KDNSATPIDFDSLAAVDGDVPAFHNNRQLSQEIQLLVSTGNLNGLIGGYFLDAKARTVFDARLPGGVTPLTFGDVGTETF
AIFGDFTYDFTPQLSLSVGGRYTWDERTSQILRRTYLGGGSPFFGGTGTLFATTSDFRGSQTFKEFTPRASLSFKPTQDQ
TLYASYAKGFKGGGFDPRGQSTACRTPTGGTCTPQQVFDFLSFDPETVETYEVGYKASYGRRLTIALSGFYSDYTDVQVP
GSIGTTVNGQQTFVGITTNAGKARIQGIEFEGNLLVAKDIGAPGSRLNLNWAGGYIDAKYKQFIDSRGIDVANRRAFQNT
PKWTASGTLAYSIPAFGGDISTSTTVSYRSKSQQFELRTPGLDQAGYALWDASIVWTSEGGRYSLGVHGRNLTDKQYIVS
GNNFLSQNPDTGNFNRNAAGALIPTLGREGVLTAYYGNPRQVFVSAGVKF

Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=226, Percent_Identity=29.2035398230088, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787723, Length=192, Percent_Identity=28.6458333333333, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 82531; Mature: 82400

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.1 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFRHSIHVSALASVATLALATAAFSAPAMAQEAAADDSGAIIVTARRREESLIDVPISV
CCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCCCEEECCEEE
TAISGDALQKSGAIDITDISQSVPNVTLETSRGTNSTLTAFIRGVGQQDPVAGFEAGVGL
EEECCHHHHCCCCEEEEHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHCCCCE
YLDDVYLNRPQAAVLDIYDVERVEVLRGPQGTLYGRNTIGGAVKYVTKRLTTDPTLSVRG
EEEEEEECCCCEEEEEEECCCEEHEEECCCCCEEECCCHHHHHHHHHHHCCCCCCEEEEE
TYGSYDQADGVITASTPVGDGTLKFGGALARLSRGGFGDNLTTGRENYNKDVWAGRLSAQ
CCCCCCCCCCEEEECCCCCCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
ADGEGFFVRLTGDYTKDKSEPRGGHRLIPGLFSGAPVLNDVYDTRAGLLDPKQDVEAYGV
CCCCEEEEEEECCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCE
SLFGEFEVTDGFTLRSITAWRKDNSATPIDFDSLAAVDGDVPAFHNNRQLSQEIQLLVST
EEEEEEEECCCEEEEEEEEECCCCCCCCCCCHHHEECCCCCCCCCCCHHHHCEEEEEEEE
GNLNGLIGGYFLDAKARTVFDARLPGGVTPLTFGDVGTETFAIFGDFTYDFTPQLSLSVG
CCCCCEEEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEEECCEECCCCEEEEEEC
GRYTWDERTSQILRRTYLGGGSPFFGGTGTLFATTSDFRGSQTFKEFTPRASLSFKPTQD
CEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCEEECCCCC
QTLYASYAKGFKGGGFDPRGQSTACRTPTGGTCTPQQVFDFLSFDPETVETYEVGYKASY
CEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCEECCC
GRRLTIALSGFYSDYTDVQVPGSIGTTVNGQQTFVGITTNAGKARIQGIEFEGNLLVAKD
CCEEEEEEEECCCCCCCEEECCCCCCEECCCEEEEEEEECCCCEEEEEEEECCCEEEEEC
IGAPGSRLNLNWAGGYIDAKYKQFIDSRGIDVANRRAFQNTPKWTASGTLAYSIPAFGGD
CCCCCCEEEEEECCCEECHHHHHHHHHCCCCHHHCHHHCCCCCEECCCEEEEECCCCCCC
ISTSTTVSYRSKSQQFELRTPGLDQAGYALWDASIVWTSEGGRYSLGVHGRNLTDKQYIV
CCCCEEEEECCCCCEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEE
SGNNFLSQNPDTGNFNRNAAGALIPTLGREGVLTAYYGNPRQVFVSAGVKF
ECCCEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCEEEEEECCCCC
>Mature Secondary Structure 
GFRHSIHVSALASVATLALATAAFSAPAMAQEAAADDSGAIIVTARRREESLIDVPISV
CCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCCCEEECCEEE
TAISGDALQKSGAIDITDISQSVPNVTLETSRGTNSTLTAFIRGVGQQDPVAGFEAGVGL
EEECCHHHHCCCCEEEEHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHCCCCE
YLDDVYLNRPQAAVLDIYDVERVEVLRGPQGTLYGRNTIGGAVKYVTKRLTTDPTLSVRG
EEEEEEECCCCEEEEEEECCCEEHEEECCCCCEEECCCHHHHHHHHHHHCCCCCCEEEEE
TYGSYDQADGVITASTPVGDGTLKFGGALARLSRGGFGDNLTTGRENYNKDVWAGRLSAQ
CCCCCCCCCCEEEECCCCCCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
ADGEGFFVRLTGDYTKDKSEPRGGHRLIPGLFSGAPVLNDVYDTRAGLLDPKQDVEAYGV
CCCCEEEEEEECCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCE
SLFGEFEVTDGFTLRSITAWRKDNSATPIDFDSLAAVDGDVPAFHNNRQLSQEIQLLVST
EEEEEEEECCCEEEEEEEEECCCCCCCCCCCHHHEECCCCCCCCCCCHHHHCEEEEEEEE
GNLNGLIGGYFLDAKARTVFDARLPGGVTPLTFGDVGTETFAIFGDFTYDFTPQLSLSVG
CCCCCEEEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEEECCEECCCCEEEEEEC
GRYTWDERTSQILRRTYLGGGSPFFGGTGTLFATTSDFRGSQTFKEFTPRASLSFKPTQD
CEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCEEECCCCC
QTLYASYAKGFKGGGFDPRGQSTACRTPTGGTCTPQQVFDFLSFDPETVETYEVGYKASY
CEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCEECCC
GRRLTIALSGFYSDYTDVQVPGSIGTTVNGQQTFVGITTNAGKARIQGIEFEGNLLVAKD
CCEEEEEEEECCCCCCCEEECCCCCCEECCCEEEEEEEECCCCEEEEEEEECCCEEEEEC
IGAPGSRLNLNWAGGYIDAKYKQFIDSRGIDVANRRAFQNTPKWTASGTLAYSIPAFGGD
CCCCCCEEEEEECCCEECHHHHHHHHHCCCCHHHCHHHCCCCCEECCCEEEEECCCCCCC
ISTSTTVSYRSKSQQFELRTPGLDQAGYALWDASIVWTSEGGRYSLGVHGRNLTDKQYIV
CCCCEEEEECCCCCEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEE
SGNNFLSQNPDTGNFNRNAAGALIPTLGREGVLTAYYGNPRQVFVSAGVKF
ECCCEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA