| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is pyrR [H]
Identifier: 148380780
GI number: 148380780
Start: 2991550
End: 2992098
Strand: Reverse
Name: pyrR [H]
Synonym: CBO2821
Alternate gene names: 148380780
Gene position: 2992098-2991550 (Counterclockwise)
Preceding gene: 148380781
Following gene: 148380779
Centisome position: 76.98
GC content: 28.96
Gene sequence:
>549_bases GTGAATTTAAAGGCTGTAATAATGGATGAAGTAAAAATAAAAAGATCTATCACTAGAATTTCTCATGAAATAATAGAGAA AAACAAAGGTGGACAAGACGTAGTATTGGTAGGGATAAAAAGAAGAGGAGTACCAATAGCTAAAAGAATTGCAGAAAACA TAAAGAATTTTGAGGATATAGATATTCCTGTAGGCATTTTGGATATATCTTTATATAGAGATGATTTATCTGAATTATCA GAGGATCCAATAGTTAAAAATAATAAATTAGATGTAGATATTAAAGGCAAAAAAATAATTTTAGTAGATGATGTAATTTA TACAGGAAGAACTGCAAGGGCAGCTATACAAGCAATATTTGATAATGGTAGACCAGGTAAAATTCAATTAGCTGTCTTAG TAGATAGGGGACATAGAGATCTTCCAGTAAGACCAGATTATGTTGGTAAAAATATACCTACTTCATTAAGCGAAGCTATT TTAGTAGAACTTAATGAAATTGATGGTAATGATTCAGTTAAAATCCTTGTACATCCTTTATATAAATAA
Upstream 100 bases:
>100_bases TGAGAGATTGTAAGGCAGATATCTAATAAGTCTATACAAATGTCTTGGCGAAGGGTCGAGACATTTTTTGTTGTAAATAT AGATGAAAGGTGGAATTAGG
Downstream 100 bases:
>100_bases TATTAAAGGTTAATTGCAGAAAATTTTTATATTATTATATATGAATTTTGTACAGGGTTTTTATAAAGTTATTTTTAACC TGAAAATTAAGTTAGATTAA
Product: pyrimidine operon regulatory protein/uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNLKAVIMDEVKIKRSITRISHEIIEKNKGGQDVVLVGIKRRGVPIAKRIAENIKNFEDIDIPVGILDISLYRDDLSELS EDPIVKNNKLDVDIKGKKIILVDDVIYTGRTARAAIQAIFDNGRPGKIQLAVLVDRGHRDLPVRPDYVGKNIPTSLSEAI LVELNEIDGNDSVKILVHPLYK
Sequences:
>Translated_182_residues MNLKAVIMDEVKIKRSITRISHEIIEKNKGGQDVVLVGIKRRGVPIAKRIAENIKNFEDIDIPVGILDISLYRDDLSELS EDPIVKNNKLDVDIKGKKIILVDDVIYTGRTARAAIQAIFDNGRPGKIQLAVLVDRGHRDLPVRPDYVGKNIPTSLSEAI LVELNEIDGNDSVKILVHPLYK >Mature_182_residues MNLKAVIMDEVKIKRSITRISHEIIEKNKGGQDVVLVGIKRRGVPIAKRIAENIKNFEDIDIPVGILDISLYRDDLSELS EDPIVKNNKLDVDIKGKKIILVDDVIYTGRTARAAIQAIFDNGRPGKIQLAVLVDRGHRDLPVRPDYVGKNIPTSLSEAI LVELNEIDGNDSVKILVHPLYK
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 20320; Mature: 20320
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKAVIMDEVKIKRSITRISHEIIEKNKGGQDVVLVGIKRRGVPIAKRIAENIKNFEDI CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC DIPVGILDISLYRDDLSELSEDPIVKNNKLDVDIKGKKIILVDDVIYTGRTARAAIQAIF CCCEEEEEEEEHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECEEECCCHHHHHHHHHH DNGRPGKIQLAVLVDRGHRDLPVRPDYVGKNIPTSLSEAILVELNEIDGNDSVKILVHPL CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEC YK CC >Mature Secondary Structure MNLKAVIMDEVKIKRSITRISHEIIEKNKGGQDVVLVGIKRRGVPIAKRIAENIKNFEDI CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC DIPVGILDISLYRDDLSELSEDPIVKNNKLDVDIKGKKIILVDDVIYTGRTARAAIQAIF CCCEEEEEEEEHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECEEECCCHHHHHHHHHH DNGRPGKIQLAVLVDRGHRDLPVRPDYVGKNIPTSLSEAILVELNEIDGNDSVKILVHPL CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEC YK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA