| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380736
Identifier: 148380736
GI number: 148380736
Start: 2936772
End: 2938061
Strand: Reverse
Name: 148380736
Synonym: CBO2776
Alternate gene names: NA
Gene position: 2938061-2936772 (Counterclockwise)
Preceding gene: 148380737
Following gene: 148380731
Centisome position: 75.59
GC content: 24.5
Gene sequence:
>1290_bases ATGGAAGATAAATTTATAGATTTAAATTTAAAGTTTAATGAGGAAATAGATAAAAAATCCATACACTCAAATATTTTAGT TGTAAAAGACACTAGAGGAAATATAGTAACATCTCATATAAAAGTAGAACAAGAGAATATACTTAATATAAAGATAAAAG CAGATGAGGAATATATTAATAATGAATATACGTTGGAATTCAAAGATTGTATATATTCAAAAAATGGAAATGCTTTTAAA GAATTAGATAATATAAAATTTTGTTTAAACAAAGGTAAGATCGAAAATAATGGTACAAGGGTAGTAAAGGAAGATAATTG GATTTATTATAGTGGCAATGAAAAAATTTATACTTATATGGATTATAATCCTCATGGAGAAATAAGAAAAATTAATCTTG ATGGGTCTTTGAATATAAAACTTTGTGATGACTTTGCAAGTAATATTTGGATAAATGGGCAGTGGCTGTATTACATAAAT TATAGAGGCGGTAATGAAGAAAATTGTCTTTATAGAATAAAAAAGGATGGAAGTTCAAGAGAACGATTAACCGATACTAC TATAGATTCTTTAGTCTTCTCAGATAATTACATTTTTTATTCAGAATATATAAGTTCATCTAGTAAGGATAATTATAAAA TATATAGAATAAAAAAGGATGGATCTAGTAAGATAGCTTTAAGTAATGTAAGAGGTATAAATCTTATAATCCAAGGACCT TTTTTATATTATTTAAATATAGAGGATAATTATTCTATATATAGAATAAGGGTAGATGGATTAGATATGAAGAAAATAAA TAATTATTCTAGTAGAAATTTTATGAGAATAAAGGATGGATGGATATATTATATTAACGAAGAACTAGGAAATAACTTGT ATAGAACAACATTAGATGGAAATTACGAAGAAAAATTAAATAATGATAGTTGTGTAAATGCTATAATGGACAATACTTCT ATCTATTATGGAAAGGATATAGATAGTAATAAAACTCATTTATATAAAATAAATATAGATGGCTTAGAAAGAAAAAAAAT ATGTGAAGAAGATTGTTCAAGATCCATGGCTATTACAAGAGATAACATATATTTCTCAGGAAACGATAAGGAAGGAATAT ATAAAATAAGAAAAGAAGGGGGAGAGGTTTATACTATAACAAAGGAAAATGCTTTAGGATTAGATATAGTAGAAAATTGG ATTTATTATTACAAACTTAATTTACAGGGACTAAGTATGAAACTACATAGAATAAGTTTATATGATAACAAAAAGCAGGA AGTTTTATAA
Upstream 100 bases:
>100_bases TCTTTAGAAAGTATAATTGATAGTGCTTGGAAATGGCACAGATCCCATCCAGATGGATATTAGAATATTAAAGGAATACA AGGGAGTGTAGCTTGAAATT
Downstream 100 bases:
>100_bases TAAAATAGTAATATAGTATGTGTAGAATGAAAAAACTCCAAGAATGTAATAAAATAAGGAAAGTGTATAGCACTTTCCTT ATTTCGTAAAGCTTGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYINNEYTLEFKDCIYSKNGNAFK ELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYIN YRGGNEENCLYRIKKDGSSRERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDGNYEEKLNNDSCVNAIMDNTS IYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITRDNIYFSGNDKEGIYKIRKEGGEVYTITKENALGLDIVENW IYYYKLNLQGLSMKLHRISLYDNKKQEVL
Sequences:
>Translated_429_residues MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYINNEYTLEFKDCIYSKNGNAFK ELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYIN YRGGNEENCLYRIKKDGSSRERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDGNYEEKLNNDSCVNAIMDNTS IYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITRDNIYFSGNDKEGIYKIRKEGGEVYTITKENALGLDIVENW IYYYKLNLQGLSMKLHRISLYDNKKQEVL >Mature_429_residues MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYINNEYTLEFKDCIYSKNGNAFK ELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYIN YRGGNEENCLYRIKKDGSSRERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDGNYEEKLNNDSCVNAIMDNTS IYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITRDNIYFSGNDKEGIYKIRKEGGEVYTITKENALGLDIVENW IYYYKLNLQGLSMKLHRISLYDNKKQEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50493; Mature: 50493
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYIN CCCEEEEEEEEECCCCCCHHHCCCEEEEEECCCCEEEEEEEEECCCEEEEEEEECHHHCC NEYTLEFKDCIYSKNGNAFKELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYM CEEEEEEHHEEECCCCCHHHHHCCEEEEEECCEECCCCCEEEEECCEEEECCCCEEEEEE DYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYINYRGGNEENCLYRIKKDGSSR EECCCCCEEEEECCCEEEEEECCCCCCCEEECCEEEEEEEECCCCCCCEEEEEECCCCCC ERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP HHCCCCCHHHEEEECCEEEEEHHHCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECC FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDG EEEEEEECCCCEEEEEEECCCCHHHCCCCCCCCEEEEECCEEEEEEHHHCCCEEEEECCC NYEEKLNNDSCVNAIMDNTSIYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITR CHHHHCCCCHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE DNIYFSGNDKEGIYKIRKEGGEVYTITKENALGLDIVENWIYYYKLNLQGLSMKLHRISL CEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHHCCEEEEEEEEECEEEEEEEEEEE YDNKKQEVL ECCCHHCCC >Mature Secondary Structure MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYIN CCCEEEEEEEEECCCCCCHHHCCCEEEEEECCCCEEEEEEEEECCCEEEEEEEECHHHCC NEYTLEFKDCIYSKNGNAFKELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYM CEEEEEEHHEEECCCCCHHHHHCCEEEEEECCEECCCCCEEEEECCEEEECCCCEEEEEE DYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYINYRGGNEENCLYRIKKDGSSR EECCCCCEEEEECCCEEEEEECCCCCCCEEECCEEEEEEEECCCCCCCEEEEEECCCCCC ERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP HHCCCCCHHHEEEECCEEEEEHHHCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECC FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDG EEEEEEECCCCEEEEEEECCCCHHHCCCCCCCCEEEEECCEEEEEEHHHCCCEEEEECCC NYEEKLNNDSCVNAIMDNTSIYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITR CHHHHCCCCHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE DNIYFSGNDKEGIYKIRKEGGEVYTITKENALGLDIVENWIYYYKLNLQGLSMKLHRISL CEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHHCCEEEEEEEEECEEEEEEEEEEE YDNKKQEVL ECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA