Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is flgK [H]
Identifier: 148380698
GI number: 148380698
Start: 2890243
End: 2892111
Strand: Reverse
Name: flgK [H]
Synonym: CBO2740
Alternate gene names: 148380698
Gene position: 2892111-2890243 (Counterclockwise)
Preceding gene: 148380699
Following gene: 148380697
Centisome position: 74.41
GC content: 33.07
Gene sequence:
>1869_bases ATGTCCGGATTATTCGGAACTTTGAATATAGGTAAAAGTGGTATGTTTGCACAACAGGGAGCGTTAAACACCACATCTCA TAACATAGCTAATGCAAATACAGAAGGCTATTCAAGGCAAAGAGTAGAACTTCAAACTACAAGACCTTACTGCAAGCCAA GTATGAATAGTGCTGCAGGGCCAGGACAAGTAGGTACAGGAGTTCAAATAGTAGCTATAAACAGGGTAAGAGATAGTTTT TTAGATTATCAAACAAGAGTAGAATTGGGAGTGCAAGGCCAATTTGCTAGTAGACATAAATTTTTATCCCAAATAGAAAA TATATTAAATGAACCTACAGATGTAGGTATATCAAAATTGTTTGGAAAGTTTTTTGACGCTTGGGAGGACTTATCTGTAA ATCCACAAACTTCTAATGCTAAATCAGTAGTAATGCAACAAGCATCAGCTCTAGCAGATGAGTTAAATCATACCTTTAAT GAACTTTCAAAATTAAAGGAAAACACTCAAATGGAAATACAACAAACAGTATTTGAAGTAAACAGTATGCTAAATCAAAT AAACCAATTAAACCAAGAAATTATACAGGTAAAGGTAGCAGGACAACAACCAAATGATTTAATGGATAGAAGAGACTTGT TATTAGACAAGTTAAGTGCAAAATTTGGCATAGAAATTGATAAAGAAAATTTTGAAGGAATAAAACTGAGTACATCTAAC CATGCAAAGAATTACCAAGATAAAACCTCACCCTTTGGAGGAGAACCACCTCAAATACAGGATAAAGACGGCAACTACCA GGATGCAAATTTAGTGCAAAGAATAGATCCAGAGGATGTTTATAGATTTTCATATATAAAAGATATAAAACCTAAGGAAG ATACTACTAAACCAGGAGAAGCTGGTGAATATACAGTAACCTATTATGTAGGAGGAGATACAAAAACTGAAGATAACAAA AGAACATTGACTATTAATATAGAATCCGAAGAAGATTTTAAAAGATTAGATGAATGTAGGGTACTTTGGACAGATAAGGA TGGGAATGCGGTACAAATTGAAAATAACAGTGGTAAGTTAGAGAAGGATAATAATGCCATCGGGGTTTTGGGTAATAATA GTAAATCAGATTTTAAAAATTTAAAATTATTTGAACCACCATCAGGTGAATTAAGAGGACAAATGTCTGTACAACAGGAT ATAGATAAATACGAAGAGCAGTTAAATAAATTAGCTAAAGCTTTAGCCTTTTCTGTAAATGCTGTTCATACACAAAGTTT AGATCCTGCAAGTCCTAAAGATGGGGCACTAAACTTCTTTATTAATGGAGAGAATCCAAACAATGAAATGGAAATAACTG CAGGAAATATAGCATTAAATAAAGCTATAAAAGAAGATCCTATGAAAATAATTGCTGGAGTAACTCCAAACTCTGGTGAA GGAGATGGAAAAAGAGCTTTAGCTATATCTCAAATAAAGGACGTATTTATGAGTATACAGGGTATAGAAAAAGGTACAGA TAGAAAAAAATTCTTGGAAAAATTCTTCAATCCAAATGATGAATTTGAATTTAATGGTACTACGTTGAATACCATAGGAA AAGATACTAATGGTATGACTATGAATATTTATTTTAATGATATTATAGGTGGCCTTGGTGTGGATGAGGCAGAGGCCCAA AGGATGGTTAAAAATCAAGCTACTTCACTAGCAGGGTTCCAACAAGCTAGGGACTCTGTATCAGGAGTATCTATGGACGA AGAGTTTGCAAATTTGGTGCAGTTTAATCATTGTTATCAAGCTAATGCAAAAATAATAAGTACTGTAGATCAATTATTAG ACGTAGTAATAAATGGACTTAAGAAATAA
Upstream 100 bases:
>100_bases ACATCAATTAATTATAGACGAATTGAACTATATTATTAAAGCTTCTATAGTATAACTACGAAAATAGACATATAAACAAA TAGATAGGGAGATGAGAGAG
Downstream 100 bases:
>100_bases AAGGAGGGTGTTAAATTTTGAGAATAACAAATAAGATGATGGCAAATTCATTTATGACAGATATGAATAATAATTTGGAA AATTTAAATAGAATTAATCA
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAGPGQVGTGVQIVAINRVRDSF LDYQTRVELGVQGQFASRHKFLSQIENILNEPTDVGISKLFGKFFDAWEDLSVNPQTSNAKSVVMQQASALADELNHTFN ELSKLKENTQMEIQQTVFEVNSMLNQINQLNQEIIQVKVAGQQPNDLMDRRDLLLDKLSAKFGIEIDKENFEGIKLSTSN HAKNYQDKTSPFGGEPPQIQDKDGNYQDANLVQRIDPEDVYRFSYIKDIKPKEDTTKPGEAGEYTVTYYVGGDTKTEDNK RTLTINIESEEDFKRLDECRVLWTDKDGNAVQIENNSGKLEKDNNAIGVLGNNSKSDFKNLKLFEPPSGELRGQMSVQQD IDKYEEQLNKLAKALAFSVNAVHTQSLDPASPKDGALNFFINGENPNNEMEITAGNIALNKAIKEDPMKIIAGVTPNSGE GDGKRALAISQIKDVFMSIQGIEKGTDRKKFLEKFFNPNDEFEFNGTTLNTIGKDTNGMTMNIYFNDIIGGLGVDEAEAQ RMVKNQATSLAGFQQARDSVSGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLKK
Sequences:
>Translated_622_residues MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAGPGQVGTGVQIVAINRVRDSF LDYQTRVELGVQGQFASRHKFLSQIENILNEPTDVGISKLFGKFFDAWEDLSVNPQTSNAKSVVMQQASALADELNHTFN ELSKLKENTQMEIQQTVFEVNSMLNQINQLNQEIIQVKVAGQQPNDLMDRRDLLLDKLSAKFGIEIDKENFEGIKLSTSN HAKNYQDKTSPFGGEPPQIQDKDGNYQDANLVQRIDPEDVYRFSYIKDIKPKEDTTKPGEAGEYTVTYYVGGDTKTEDNK RTLTINIESEEDFKRLDECRVLWTDKDGNAVQIENNSGKLEKDNNAIGVLGNNSKSDFKNLKLFEPPSGELRGQMSVQQD IDKYEEQLNKLAKALAFSVNAVHTQSLDPASPKDGALNFFINGENPNNEMEITAGNIALNKAIKEDPMKIIAGVTPNSGE GDGKRALAISQIKDVFMSIQGIEKGTDRKKFLEKFFNPNDEFEFNGTTLNTIGKDTNGMTMNIYFNDIIGGLGVDEAEAQ RMVKNQATSLAGFQQARDSVSGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLKK >Mature_621_residues SGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAGPGQVGTGVQIVAINRVRDSFL DYQTRVELGVQGQFASRHKFLSQIENILNEPTDVGISKLFGKFFDAWEDLSVNPQTSNAKSVVMQQASALADELNHTFNE LSKLKENTQMEIQQTVFEVNSMLNQINQLNQEIIQVKVAGQQPNDLMDRRDLLLDKLSAKFGIEIDKENFEGIKLSTSNH AKNYQDKTSPFGGEPPQIQDKDGNYQDANLVQRIDPEDVYRFSYIKDIKPKEDTTKPGEAGEYTVTYYVGGDTKTEDNKR TLTINIESEEDFKRLDECRVLWTDKDGNAVQIENNSGKLEKDNNAIGVLGNNSKSDFKNLKLFEPPSGELRGQMSVQQDI DKYEEQLNKLAKALAFSVNAVHTQSLDPASPKDGALNFFINGENPNNEMEITAGNIALNKAIKEDPMKIIAGVTPNSGEG DGKRALAISQIKDVFMSIQGIEKGTDRKKFLEKFFNPNDEFEFNGTTLNTIGKDTNGMTMNIYFNDIIGGLGVDEAEAQR MVKNQATSLAGFQQARDSVSGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLKK
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=228, Percent_Identity=29.3859649122807, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 68994; Mature: 68863
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAG CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC PGQVGTGVQIVAINRVRDSFLDYQTRVELGVQGQFASRHKFLSQIENILNEPTDVGISKL CCCCCCCEEEEEEHHHHHHHHCHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH FGKFFDAWEDLSVNPQTSNAKSVVMQQASALADELNHTFNELSKLKENTQMEIQQTVFEV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSMLNQINQLNQEIIQVKVAGQQPNDLMDRRDLLLDKLSAKFGIEIDKENFEGIKLSTSN HHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCC HAKNYQDKTSPFGGEPPQIQDKDGNYQDANLVQRIDPEDVYRFSYIKDIKPKEDTTKPGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC AGEYTVTYYVGGDTKTEDNKRTLTINIESEEDFKRLDECRVLWTDKDGNAVQIENNSGKL CCCEEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHCEEEEECCCCCEEEEECCCCCC EKDNNAIGVLGNNSKSDFKNLKLFEPPSGELRGQMSVQQDIDKYEEQLNKLAKALAFSVN CCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVHTQSLDPASPKDGALNFFINGENPNNEMEITAGNIALNKAIKEDPMKIIAGVTPNSGE HEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCC GDGKRALAISQIKDVFMSIQGIEKGTDRKKFLEKFFNPNDEFEFNGTTLNTIGKDTNGMT CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCEEEECCCCCCCCEE MNIYFNDIIGGLGVDEAEAQRMVKNQATSLAGFQQARDSVSGVSMDEEFANLVQFNHCYQ EEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ANAKIISTVDQLLDVVINGLKK CCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAG CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC PGQVGTGVQIVAINRVRDSFLDYQTRVELGVQGQFASRHKFLSQIENILNEPTDVGISKL CCCCCCCEEEEEEHHHHHHHHCHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH FGKFFDAWEDLSVNPQTSNAKSVVMQQASALADELNHTFNELSKLKENTQMEIQQTVFEV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSMLNQINQLNQEIIQVKVAGQQPNDLMDRRDLLLDKLSAKFGIEIDKENFEGIKLSTSN HHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCC HAKNYQDKTSPFGGEPPQIQDKDGNYQDANLVQRIDPEDVYRFSYIKDIKPKEDTTKPGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC AGEYTVTYYVGGDTKTEDNKRTLTINIESEEDFKRLDECRVLWTDKDGNAVQIENNSGKL CCCEEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHCEEEEECCCCCEEEEECCCCCC EKDNNAIGVLGNNSKSDFKNLKLFEPPSGELRGQMSVQQDIDKYEEQLNKLAKALAFSVN CCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVHTQSLDPASPKDGALNFFINGENPNNEMEITAGNIALNKAIKEDPMKIIAGVTPNSGE HEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCC GDGKRALAISQIKDVFMSIQGIEKGTDRKKFLEKFFNPNDEFEFNGTTLNTIGKDTNGMT CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCEEEECCCCCCCCEE MNIYFNDIIGGLGVDEAEAQRMVKNQATSLAGFQQARDSVSGVSMDEEFANLVQFNHCYQ EEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ANAKIISTVDQLLDVVINGLKK CCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8045879 [H]