| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380642
Identifier: 148380642
GI number: 148380642
Start: 2832867
End: 2833637
Strand: Reverse
Name: 148380642
Synonym: CBO2684
Alternate gene names: NA
Gene position: 2833637-2832867 (Counterclockwise)
Preceding gene: 148380643
Following gene: 148380641
Centisome position: 72.9
GC content: 23.09
Gene sequence:
>771_bases ATGAATATAAAAATACTTGTAGCAACGCATAAGAAATATAGTATGCCTAAAGAAAGTATGTATTTACCAATACATGTTGG ATGTGAAGGGAAAAAAGATTTGGGATATATAGGGGATAATACAGGAGATAATATATCTCTTAGAAATTCTAATTATTGTG AATTAACAGGCCTTTATTGGGCATGGAAAAATTTAAAATGTGATTATATAGGGCTATGCCATTATAGAAGATATTTTACT AATAGTAATTTATTTAAAAAAGCTTCAAATAGAAATAATAAAATGGACTTAATATTAAGTAAATTAGAAATTGAAAATTT ACTAAAAGAATATGATGTTATTTTACCCCAAAAAAGAAATTATTATATAGAGACTATATGGTCTCATTATGGTAATGCTC ATCATATAAAAGATTTAGAGGAAACTAAAAAAATTATAAGTGAATTATATCCTGAGTATATTTCTAGCTTTGATAAAGTA ATGAAAGGGAAAAAACTTCATTTATATAATATGTTTGTAATGGATAAAGAGAATTTTAATAAATATTGTGAATGGATCTT TAGTATACTGTTTGAATTAGAAAAGAGAATAGACATATCAAATTATGATAATTACCAAAAAAGAATATTTGGATTTTTAA GTGAAAGATTATTCAATGTTTGGATTGTTAAAAATCAAAAAACAGTATATGAAATGGATGTAATAAATATGGAAAATATT AATTTGCCATCAAAAATACGAGGTTTTATTAAAAGAAAATTTAGAAATTAG
Upstream 100 bases:
>100_bases AGATTTTATTTGGTGGAAGATTGGCAGATTATAAATATTATGATATGCACCACATAGTTTACAAAGCTCTTAAAAAAGTA AAAGAGGAGTTTAGAGATTA
Downstream 100 bases:
>100_bases AAATTATATAAAGGATATGATGATAAATGAATTTTTATGTATGTGCCACGCCTTATCATTTATTTATTACATTATGTGAT ATAGCTAATAGTAATATAAA
Product: exopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: Capsular Biosynthesis Protein; Exopolysaccharide Biosynthesis Protein; Lipopolysaccharide Biosynthesis Glycosyltransferase; Glycosyl Transferase; Galactosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase Alpha-1 3-Galactosyltransferase; Family 8 Glycosyl Transferase; EpsIH Glycosyltransferase; Sugar Transferase; Polysachharide Biosynthesis Protein
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNIKILVATHKKYSMPKESMYLPIHVGCEGKKDLGYIGDNTGDNISLRNSNYCELTGLYWAWKNLKCDYIGLCHYRRYFT NSNLFKKASNRNNKMDLILSKLEIENLLKEYDVILPQKRNYYIETIWSHYGNAHHIKDLEETKKIISELYPEYISSFDKV MKGKKLHLYNMFVMDKENFNKYCEWIFSILFELEKRIDISNYDNYQKRIFGFLSERLFNVWIVKNQKTVYEMDVINMENI NLPSKIRGFIKRKFRN
Sequences:
>Translated_256_residues MNIKILVATHKKYSMPKESMYLPIHVGCEGKKDLGYIGDNTGDNISLRNSNYCELTGLYWAWKNLKCDYIGLCHYRRYFT NSNLFKKASNRNNKMDLILSKLEIENLLKEYDVILPQKRNYYIETIWSHYGNAHHIKDLEETKKIISELYPEYISSFDKV MKGKKLHLYNMFVMDKENFNKYCEWIFSILFELEKRIDISNYDNYQKRIFGFLSERLFNVWIVKNQKTVYEMDVINMENI NLPSKIRGFIKRKFRN >Mature_256_residues MNIKILVATHKKYSMPKESMYLPIHVGCEGKKDLGYIGDNTGDNISLRNSNYCELTGLYWAWKNLKCDYIGLCHYRRYFT NSNLFKKASNRNNKMDLILSKLEIENLLKEYDVILPQKRNYYIETIWSHYGNAHHIKDLEETKKIISELYPEYISSFDKV MKGKKLHLYNMFVMDKENFNKYCEWIFSILFELEKRIDISNYDNYQKRIFGFLSERLFNVWIVKNQKTVYEMDVINMENI NLPSKIRGFIKRKFRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30826; Mature: 30826
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKILVATHKKYSMPKESMYLPIHVGCEGKKDLGYIGDNTGDNISLRNSNYCELTGLYW CCEEEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEE AWKNLKCDYIGLCHYRRYFTNSNLFKKASNRNNKMDLILSKLEIENLLKEYDVILPQKRN ECCCCCCCEEHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC YYIETIWSHYGNAHHIKDLEETKKIISELYPEYISSFDKVMKGKKLHLYNMFVMDKENFN HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCHHHH KYCEWIFSILFELEKRIDISNYDNYQKRIFGFLSERLFNVWIVKNQKTVYEMDVINMENI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEEECCCC NLPSKIRGFIKRKFRN CCCHHHHHHHHHHHCC >Mature Secondary Structure MNIKILVATHKKYSMPKESMYLPIHVGCEGKKDLGYIGDNTGDNISLRNSNYCELTGLYW CCEEEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEE AWKNLKCDYIGLCHYRRYFTNSNLFKKASNRNNKMDLILSKLEIENLLKEYDVILPQKRN ECCCCCCCEEHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC YYIETIWSHYGNAHHIKDLEETKKIISELYPEYISSFDKVMKGKKLHLYNMFVMDKENFN HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCHHHH KYCEWIFSILFELEKRIDISNYDNYQKRIFGFLSERLFNVWIVKNQKTVYEMDVINMENI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEEECCCC NLPSKIRGFIKRKFRN CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA