| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148380600
Identifier: 148380600
GI number: 148380600
Start: 2794267
End: 2794926
Strand: Reverse
Name: 148380600
Synonym: CBO2642
Alternate gene names: NA
Gene position: 2794926-2794267 (Counterclockwise)
Preceding gene: 148380601
Following gene: 148380599
Centisome position: 71.91
GC content: 24.24
Gene sequence:
>660_bases TTGAATAATAAAGATGAATTTAAGATTAATAATAGGGTAGAAATAGAGTGGGAGGATGGTTATTATAGAAGTATTATACA GGATGTAAATGAAGATACCATTTATATAAATATACCTGCTAATAAGGGGAAATATTTGCCACTAAACCATAATGATAAAG TAACTGTTTTTTATTTTCATGGTGAAAAGATATTTAAGTTTAGAACTATAGTAACAGGAAGAAAAATAGATAAAATACTA CTTATAGCTTTAAAAAAACCACAGAAAATGAATAGAATTCAAAGAAGAAATTTTGTAAGAATAAGTTTAATTTTAAATAC TTATGCCGCGCTAATAGATACTAAAAGAGATTTAAAAGAAATTTGTTATGCTAATAAATGCAATACTGAATTCGATTTTT TTGATGCTGATATTGTAGATATAAGTGGTGGTGGATTAAAACTTTCTACTAAAAAGGATATAGATTTTGGAGAAGAAATT ATAGTGAATATTCCTTTTGAGAAGGAAAATATGGCTATAAAGGGTAAAATAATTAGAAAGCAAAATGAAAAAGAAAAATA TATTTATGGAGTTAAATTTTTAGACATAGATGTATTAACTAGAGAAAAAATAATAAAATTTATTTTTTCTAAAATGAGAA AACAAGTGCATAGGCTATAG
Upstream 100 bases:
>100_bases AGAATATATTAGGTGATGTTAAGAGTTATAATGATAATGTGAGTATAGAAGGATTTTTTAAAAAATTATTCAGTATATTT TCTTAGGGGGATGAGTATTC
Downstream 100 bases:
>100_bases AGGAGGATAGGTCATGGCAATAGCTGATAATAATTTATATGTTAAAGAAGAGATAGTAAAAAAATATATTCCTTTAGTTA AATATATAGCCTCTAGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Flagellar Protein; Type IV Pilus Assembly Protein PilZ; Type Iv Pilus Assembly Pilz; Type Iv Pilus Assembly Protein Pilz; Glycosyltransferase; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNNKDEFKINNRVEIEWEDGYYRSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFHGEKIFKFRTIVTGRKIDKIL LIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKEICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEI IVNIPFEKENMAIKGKIIRKQNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL
Sequences:
>Translated_219_residues MNNKDEFKINNRVEIEWEDGYYRSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFHGEKIFKFRTIVTGRKIDKIL LIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKEICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEI IVNIPFEKENMAIKGKIIRKQNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL >Mature_219_residues MNNKDEFKINNRVEIEWEDGYYRSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFHGEKIFKFRTIVTGRKIDKIL LIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKEICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEI IVNIPFEKENMAIKGKIIRKQNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL
Specific function: Unknown
COG id: COG5581
COG function: function code M; Predicted glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25967; Mature: 25967
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKDEFKINNRVEIEWEDGYYRSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFH CCCCCCEEECCEEEEEECCCHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCEEEEEEEE GEKIFKFRTIVTGRKIDKILLIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKE CCEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHCCEEEEEEHHHHHHHHHCCHHHHHH ICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEIIVNIPFEKENMAIKGKIIRK HHHCCCCCCCCCEECCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEC QNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL CCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNKDEFKINNRVEIEWEDGYYRSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFH CCCCCCEEECCEEEEEECCCHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCEEEEEEEE GEKIFKFRTIVTGRKIDKILLIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKE CCEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHCCEEEEEEHHHHHHHHHCCHHHHHH ICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEIIVNIPFEKENMAIKGKIIRK HHHCCCCCCCCCEECCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEC QNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL CCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA