| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is mntR [C]
Identifier: 148379509
GI number: 148379509
Start: 1675185
End: 1675544
Strand: Direct
Name: mntR [C]
Synonym: CBO1541
Alternate gene names: 148379509
Gene position: 1675185-1675544 (Clockwise)
Preceding gene: 148379508
Following gene: 148379510
Centisome position: 43.1
GC content: 28.89
Gene sequence:
>360_bases ATGTATGAATCAAGGGAAAATTATTTAGAGACAATTTTTATATTAGAAAATAGAAATGGTAGTGTAAGATCTATTGATAT TGCAAAGGAACTTAATTTTAGTAAGCCAAGTGTCAGTCATGCAGTAGGTCTATTAAAAAAATCTGGACACATTAATATAG ATAGTAAAGGATATATAACACTTACTAATATTGGACGTGAAAAAGCAGAAAGTATATATGAACGTCATGAGATATTGACT AAATTTTTTGTTGAAATAGCAAAGGTATCTAAAGAGGTAGCTGAAAAAGATGCCTGCAAAGTTGAGCATGTAATAAGTGA TGAAACTTTTCAGGGAATTAAAGAGTTTATGAAAAAGTAG
Upstream 100 bases:
>100_bases ATATATTTAGATGTTATATGATAATGAATACAATCATTAGCTTGTAAAAAATGTATAGGCTAGAAGTATTACAATATTGT ATTTTATATGGAGGATAATC
Downstream 100 bases:
>100_bases TGATAAAGCGGCATAAATTTTTGAATTAAAGATTATATTTACCAATACGATAATAGTTTATGAAAATATATTGTAATCTG GAAGGAGGTTTAAATTGATG
Product: putative iron-dependent repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MYESRENYLETIFILENRNGSVRSIDIAKELNFSKPSVSHAVGLLKKSGHINIDSKGYITLTNIGREKAESIYERHEILT KFFVEIAKVSKEVAEKDACKVEHVISDETFQGIKEFMKK
Sequences:
>Translated_119_residues MYESRENYLETIFILENRNGSVRSIDIAKELNFSKPSVSHAVGLLKKSGHINIDSKGYITLTNIGREKAESIYERHEILT KFFVEIAKVSKEVAEKDACKVEHVISDETFQGIKEFMKK >Mature_119_residues MYESRENYLETIFILENRNGSVRSIDIAKELNFSKPSVSHAVGLLKKSGHINIDSKGYITLTNIGREKAESIYERHEILT KFFVEIAKVSKEVAEKDACKVEHVISDETFQGIKEFMKK
Specific function: In the presence of manganese, it represses the manganese transporter mnth [C]
COG id: COG1321
COG function: function code K; Mn-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787038, Length=114, Percent_Identity=32.4561403508772, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001367 - InterPro: IPR022689 - InterPro: IPR022687 - InterPro: IPR011991 [H]
Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]
EC number: NA
Molecular weight: Translated: 13639; Mature: 13639
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS50944 HTH_DTXR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYESRENYLETIFILENRNGSVRSIDIAKELNFSKPSVSHAVGLLKKSGHINIDSKGYIT CCCCHHHHEEEEEEEECCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCEE LTNIGREKAESIYERHEILTKFFVEIAKVSKEVAEKDACKVEHVISDETFQGIKEFMKK EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MYESRENYLETIFILENRNGSVRSIDIAKELNFSKPSVSHAVGLLKKSGHINIDSKGYIT CCCCHHHHEEEEEEEECCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCEE LTNIGREKAESIYERHEILTKFFVEIAKVSKEVAEKDACKVEHVISDETFQGIKEFMKK EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]