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The map label for this gene is hxlR [H]

Identifier: 148379498

GI number: 148379498

Start: 1664666

End: 1665019

Strand: Reverse

Name: hxlR [H]

Synonym: CBO1529

Alternate gene names: 148379498

Gene position: 1665019-1664666 (Counterclockwise)

Preceding gene: 148379499

Following gene: 148379492

Centisome position: 42.84

GC content: 29.1

Gene sequence:

>354_bases
ATGAACTCTAATTGCGATATTTTAGAATTTAAAAATAAAGAATATGCATGTACCTTTGAAATTACAATAGATCTAATAGG
TGGTAAATGGAAACCTCTTATTATATGGCATCTTGGAACAAAAGGTACACAAAGATTTAATGAATTAAAAAAATTGATAC
CTAAAATAACTCAAAAAATGTTAACTCAACAACTAAGAGAACTAGAGGCTGATAACCTAGTTGATAGAAAGGTTTATGCT
CAGGTTCCCCCAAAAGTTGAATATTCATTAACAGATTTAGGTAAAAGTTTAATGCCTATTCTTAGTATGATGTGCAAATG
GGGAGAAGACTATTATGAGCTAATTACTTTATAG

Upstream 100 bases:

>100_bases
TAATTTATGCTACTATTGTAAAAAATAAGTTTCATCAAAACAAGTACGCACTTTTTTGTATTATAGTATCTAAAAAGATA
CTATGGAAAGGATAAAAACT

Downstream 100 bases:

>100_bases
TTTTATTATTTACACTAACAAAAATCCGGCAAGGGTATAAATAAATTACCTAAGCCGGTTGTTATCTTCGGTTTCAAGCT
TGTCTCTTAAACTGAAACAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNSNCDILEFKNKEYACTFEITIDLIGGKWKPLIIWHLGTKGTQRFNELKKLIPKITQKMLTQQLRELEADNLVDRKVYA
QVPPKVEYSLTDLGKSLMPILSMMCKWGEDYYELITL

Sequences:

>Translated_117_residues
MNSNCDILEFKNKEYACTFEITIDLIGGKWKPLIIWHLGTKGTQRFNELKKLIPKITQKMLTQQLRELEADNLVDRKVYA
QVPPKVEYSLTDLGKSLMPILSMMCKWGEDYYELITL
>Mature_117_residues
MNSNCDILEFKNKEYACTFEITIDLIGGKWKPLIIWHLGTKGTQRFNELKKLIPKITQKMLTQQLRELEADNLVDRKVYA
QVPPKVEYSLTDLGKSLMPILSMMCKWGEDYYELITL

Specific function: Positive regulator of hxlAB expression [H]

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=93, Percent_Identity=36.5591397849462, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13672; Mature: 13672

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNCDILEFKNKEYACTFEITIDLIGGKWKPLIIWHLGTKGTQRFNELKKLIPKITQKM
CCCCCCEEEECCCCEEEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LTQQLRELEADNLVDRKVYAQVPPKVEYSLTDLGKSLMPILSMMCKWGEDYYELITL
HHHHHHHHCCCCHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MNSNCDILEFKNKEYACTFEITIDLIGGKWKPLIIWHLGTKGTQRFNELKKLIPKITQKM
CCCCCCEEEECCCCEEEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LTQQLRELEADNLVDRKVYAQVPPKVEYSLTDLGKSLMPILSMMCKWGEDYYELITL
HHHHHHHHCCCCHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377; 1715856 [H]