| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is yhjQ [H]
Identifier: 148379494
GI number: 148379494
Start: 1660488
End: 1660835
Strand: Direct
Name: yhjQ [H]
Synonym: CBO1525
Alternate gene names: 148379494
Gene position: 1660488-1660835 (Clockwise)
Preceding gene: 148379493
Following gene: 148379495
Centisome position: 42.72
GC content: 35.34
Gene sequence:
>348_bases GTGGGAATAGTAAATACAGGAGCAGACCCATATCAAGCATGCATATATGCCTGCGGTAGATGTGCTCAAGCATGTTACGA ATGTTTGGACGATTGTTTAAATGAGGAAGATGTTAATCCAAGAAAAAATTGTGTAAAAATTCTTATTGAATGTGCAAAAA TGTGTGAAATGTCAGTAGGTCTTATGGCAATGAATGCACAATTTGCTAAGGATTATTGTAAACTTTGCGCTACTATTTGT GATAAATGTTCTCAGGAGTGTAAAATGGTTCAAGATGAACATTGCCAAAAATGTGCACAAGAATGTACTACATGTGCAGA AGAATGTAACAAGATGGCTAGAATGTAA
Upstream 100 bases:
>100_bases TATTTTTGTACTTTTTAGATTTTCAGAGCTTTAGAATATAGATATATTTTTCGGTCATAATATATTTTGAATAAAAAATA TATTGAAGGAAGTGTTTAGT
Downstream 100 bases:
>100_bases TATTCAAAATATAAAGTCCATTTTAATGTACAGTTTTAGCTAAGATATTTTTATAAATCTATGAAGAATTTAATAGCTAA GCAGATAAAAGCTAGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGIVNTGADPYQACIYACGRCAQACYECLDDCLNEEDVNPRKNCVKILIECAKMCEMSVGLMAMNAQFAKDYCKLCATIC DKCSQECKMVQDEHCQKCAQECTTCAEECNKMARM
Sequences:
>Translated_115_residues MGIVNTGADPYQACIYACGRCAQACYECLDDCLNEEDVNPRKNCVKILIECAKMCEMSVGLMAMNAQFAKDYCKLCATIC DKCSQECKMVQDEHCQKCAQECTTCAEECNKMARM >Mature_114_residues GIVNTGADPYQACIYACGRCAQACYECLDDCLNEEDVNPRKNCVKILIECAKMCEMSVGLMAMNAQFAKDYCKLCATICD KCSQECKMVQDEHCQKCAQECTTCAEECNKMARM
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005560 [H]
Pfam domain/function: PF03860 DUF326 [H]
EC number: NA
Molecular weight: Translated: 12817; Mature: 12686
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
16.5 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 23.5 %Cys+Met (Translated Protein) 16.7 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 22.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVNTGADPYQACIYACGRCAQACYECLDDCLNEEDVNPRKNCVKILIECAKMCEMSVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LMAMNAQFAKDYCKLCATICDKCSQECKMVQDEHCQKCAQECTTCAEECNKMARM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIVNTGADPYQACIYACGRCAQACYECLDDCLNEEDVNPRKNCVKILIECAKMCEMSVG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LMAMNAQFAKDYCKLCATICDKCSQECKMVQDEHCQKCAQECTTCAEECNKMARM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]