Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is yajO [H]
Identifier: 148379479
GI number: 148379479
Start: 1642140
End: 1643276
Strand: Direct
Name: yajO [H]
Synonym: CBO1508
Alternate gene names: 148379479
Gene position: 1642140-1643276 (Clockwise)
Preceding gene: 148379478
Following gene: 148379481
Centisome position: 42.25
GC content: 29.11
Gene sequence:
>1137_bases ATGTTATATAGAAAATTTGGGAAAACCGATGAAGAGGTCTCTATATTAGGATTTGGATGTATGAGACTTCCAATAATAGA TAATGATCCAGCCAAAATTGATGAAAAAAAAGCTATAAAACAAATAAGATATGCTATTGACAATGGGGTTAATTATATAG ATACAGCTTATCCGTATCATGAAGGTGCCAGTGAATTTTTAGTAGGAAAGGCTCTTAAAGATGGATATAGGGAAAGAGTA AAATTAGCTACTAAACTTCCTTCTTGGCTTATAAAAAGCAGAGAGGATATGGACAAATATTTAAATGAGCAATTAGAAAA ATTGCAAACAGATCATATAGATTTTTATCTTTTACATGCTCTAAATAAAGGAGATTGGGAAAATTTAAAAAAGCATAATG TATTTGAGTTTTTAGATAAAGCTATAGAAGATGGAAGAATAAAATATGCAGGCTTTTCTTTTCATGATGAATTATCTTTG TTTAAAGAAATAGTAGATTCTTATGATTGGAGTTTTTGTCAAATTCAATATAATTTTATAGATGAAAATTATCAAGCAGG TACAAAAGGGCTTAGATATGCTTCACAAAAAGGTCTTGCAGTTGTAATAATGGAACCTTTAAGAGGTGGAAACTTAGCAA GAGTAGTTCCAGATGATGTTAAGAAAATATGGAATAAATCTCATATTAAGAGAAGTCCTGCTCAGTGGGGGTTCAGATTC TTATGGAATCATCCAGAAATAACTGTAGTTTTAAGTGGTATGGAAGAAATGGATCATATAAAAGAAAATATAAAAGAATC TAATAACGGATATGCAAGTTCCTTAACAGAAAAAGAGCTAGAATTAATTGATAAGGTGAAAGAGATATATATAAGTAGAA TAAAGGTTGATTGTACAAACTGTAGATATTGTATGCCATGTCCCTTTGGAGTAAACATACCTAAAAATTTTAAGTATTTA AATATGGCTTCAATTTATAGTGATGTGAAAAAACAAAAGAAAAAGTACATAAATCACTTAAACAAAAATGAAAAAGCTTC AAACTGCAGAAAATGTGGAAAATGTGAGGAAGCTTGTCCTCAGAATATTAAAATAAGAAATATGTTAGAGGAAGTAGTTA AAACTTTTGAACCTTAA
Upstream 100 bases:
>100_bases AGATATTAAATTTAAAATATATCTTAAAAATGTCATAATATTAATAATATAGAATATATATTTTAAATAGACAAGTTAAA AAAGCTAAAGGGGGATGAAA
Downstream 100 bases:
>100_bases CAAATTGTTTGCAATTTGTTAAGGTTCTTTCTTTGTAATTTTCTCTTAAGAGTATTTTTAAATACTTACTTCTCTAATTT CATTTCCACTCCATTGTAAG
Product: oxidoreductase, aldo/keto reductase family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MLYRKFGKTDEEVSILGFGCMRLPIIDNDPAKIDEKKAIKQIRYAIDNGVNYIDTAYPYHEGASEFLVGKALKDGYRERV KLATKLPSWLIKSREDMDKYLNEQLEKLQTDHIDFYLLHALNKGDWENLKKHNVFEFLDKAIEDGRIKYAGFSFHDELSL FKEIVDSYDWSFCQIQYNFIDENYQAGTKGLRYASQKGLAVVIMEPLRGGNLARVVPDDVKKIWNKSHIKRSPAQWGFRF LWNHPEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKEIYISRIKVDCTNCRYCMPCPFGVNIPKNFKYL NMASIYSDVKKQKKKYINHLNKNEKASNCRKCGKCEEACPQNIKIRNMLEEVVKTFEP
Sequences:
>Translated_378_residues MLYRKFGKTDEEVSILGFGCMRLPIIDNDPAKIDEKKAIKQIRYAIDNGVNYIDTAYPYHEGASEFLVGKALKDGYRERV KLATKLPSWLIKSREDMDKYLNEQLEKLQTDHIDFYLLHALNKGDWENLKKHNVFEFLDKAIEDGRIKYAGFSFHDELSL FKEIVDSYDWSFCQIQYNFIDENYQAGTKGLRYASQKGLAVVIMEPLRGGNLARVVPDDVKKIWNKSHIKRSPAQWGFRF LWNHPEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKEIYISRIKVDCTNCRYCMPCPFGVNIPKNFKYL NMASIYSDVKKQKKKYINHLNKNEKASNCRKCGKCEEACPQNIKIRNMLEEVVKTFEP >Mature_378_residues MLYRKFGKTDEEVSILGFGCMRLPIIDNDPAKIDEKKAIKQIRYAIDNGVNYIDTAYPYHEGASEFLVGKALKDGYRERV KLATKLPSWLIKSREDMDKYLNEQLEKLQTDHIDFYLLHALNKGDWENLKKHNVFEFLDKAIEDGRIKYAGFSFHDELSL FKEIVDSYDWSFCQIQYNFIDENYQAGTKGLRYASQKGLAVVIMEPLRGGNLARVVPDDVKKIWNKSHIKRSPAQWGFRF LWNHPEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKEIYISRIKVDCTNCRYCMPCPFGVNIPKNFKYL NMASIYSDVKKQKKKYINHLNKNEKASNCRKCGKCEEACPQNIKIRNMLEEVVKTFEP
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI87081735, Length=246, Percent_Identity=31.7073170731707, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI212645785, Length=320, Percent_Identity=23.4375, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24646155, Length=321, Percent_Identity=25.2336448598131, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24646159, Length=167, Percent_Identity=29.940119760479, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 44066; Mature: 44066
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRKFGKTDEEVSILGFGCMRLPIIDNDPAKIDEKKAIKQIRYAIDNGVNYIDTAYPYH CCCCCCCCCCCCEEEEEECEEECCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC EGASEFLVGKALKDGYRERVKLATKLPSWLIKSREDMDKYLNEQLEKLQTDHIDFYLLHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHEEEC LNKGDWENLKKHNVFEFLDKAIEDGRIKYAGFSFHDELSLFKEIVDSYDWSFCQIQYNFI CCCCCHHHHHHCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEC DENYQAGTKGLRYASQKGLAVVIMEPLRGGNLARVVPDDVKKIWNKSHIKRSPAQWGFRF CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCHHHHHHHHHHHCCCCCHHHCHHH LWNHPEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKEIYISRIKVDCTN EECCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC CRYCMPCPFGVNIPKNFKYLNMASIYSDVKKQKKKYINHLNKNEKASNCRKCGKCEEACP CCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCC QNIKIRNMLEEVVKTFEP CCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLYRKFGKTDEEVSILGFGCMRLPIIDNDPAKIDEKKAIKQIRYAIDNGVNYIDTAYPYH CCCCCCCCCCCCEEEEEECEEECCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC EGASEFLVGKALKDGYRERVKLATKLPSWLIKSREDMDKYLNEQLEKLQTDHIDFYLLHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHEEEC LNKGDWENLKKHNVFEFLDKAIEDGRIKYAGFSFHDELSLFKEIVDSYDWSFCQIQYNFI CCCCCHHHHHHCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEC DENYQAGTKGLRYASQKGLAVVIMEPLRGGNLARVVPDDVKKIWNKSHIKRSPAQWGFRF CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCHHHHHHHHHHHCCCCCHHHCHHH LWNHPEITVVLSGMEEMDHIKENIKESNNGYASSLTEKELELIDKVKEIYISRIKVDCTN EECCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC CRYCMPCPFGVNIPKNFKYLNMASIYSDVKKQKKKYINHLNKNEKASNCRKCGKCEEACP CCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCC QNIKIRNMLEEVVKTFEP CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]