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The map label for this gene is cobW [H]

Identifier: 148379463

GI number: 148379463

Start: 1624147

End: 1625076

Strand: Direct

Name: cobW [H]

Synonym: CBO1492

Alternate gene names: 148379463

Gene position: 1624147-1625076 (Clockwise)

Preceding gene: 148379462

Following gene: 148379464

Centisome position: 41.78

GC content: 26.24

Gene sequence:

>930_bases
ATGATAAAAGTAAATTTAATTTCAGGTTTTTTAGGAGCAGGAAAGACTACTTTAATAAAAAAAGTTTTGGAAAATGTGAA
AGAAGAAAAGATAGTAATAATAGAAAATGAATTTGGGGAAGTAGCTATAGATGGAGACTTAATAAAAAAAGAGGGTTTTG
ATGTATTTGAATTAAGAAGTGGATGTATTTGTTGTATGATGAAACAAGACTTTGAGGATTCCCTACAAAAAGTAATAGAA
GAATATAAACCAGATAGAATAATAATAGAACCTACAGGGATAAGTTCCTTAAGTCAACTTTTGGATATATTAGAAAAGGA
TAATTTTAAAGATAAAATTAACATTAACCGAGTTATAACTGTGGTAGATAGTACAAGCTATTTAGAGGAAAAGGATGCCT
TCGGAGAATTTTACATGGATCAAGTAGAAAATGCAGAAATATTAATAGTAAGTAAAACTCAAATGGTGGATAAAAGTACT
TTAAAAAAAGTAAAAGAATCCTTAAGGGAGTGCAATAAAAAAGCCAGTATAAAAACATTGGCCTTTGAAGAATTTAATAA
GGAGTATATACTAAATTTTTTAGATGAGGATTCATCAAGGGATATAAAAAGAGATTCTGTAGAAGTTATGATATCTACAG
AAGATGGGTTTGAAAGTTTAGGTGTAAAAACTAATAAAATATTTGAAATAAGAGAAATAAATGAAATTGTAAGTAAATTA
TTTACTGGGAAATATGGGGATGTAATAAGAATAAAAGGGTTTTTAAAAGGGGAAAAAGAAATAATTCAAATCAATTGTAC
TAAAAAGGTTCATAACATAGAAACAGTTGAAGATAGCAAAGAAATAAAGATTTGTATAATAGGACAAGACCTACGTAAAA
GGAAAATACAATTTTTGTTCAAAGAAAAATATAATATAAAAAAATTATAA

Upstream 100 bases:

>100_bases
TAAGTTTTTAATGATGTCTTAGAACTTATAGCGTTTTATCAATAAAAATCAAATATAATTAAAATTGTAGCATTAGGTAA
ATCTTAATGGAGTGATTAAA

Downstream 100 bases:

>100_bases
AAAATTTTAAGGAGTAATGATAATGGATTATGATGTGAACTTTAAATGTGTTTTAGATACAGGAGAAGAGATGCCCAAAG
AAGCTGTAGAAAGAGCGGGA

Product: CobW/P47K family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MIKVNLISGFLGAGKTTLIKKVLENVKEEKIVIIENEFGEVAIDGDLIKKEGFDVFELRSGCICCMMKQDFEDSLQKVIE
EYKPDRIIIEPTGISSLSQLLDILEKDNFKDKININRVITVVDSTSYLEEKDAFGEFYMDQVENAEILIVSKTQMVDKST
LKKVKESLRECNKKASIKTLAFEEFNKEYILNFLDEDSSRDIKRDSVEVMISTEDGFESLGVKTNKIFEIREINEIVSKL
FTGKYGDVIRIKGFLKGEKEIIQINCTKKVHNIETVEDSKEIKICIIGQDLRKRKIQFLFKEKYNIKKL

Sequences:

>Translated_309_residues
MIKVNLISGFLGAGKTTLIKKVLENVKEEKIVIIENEFGEVAIDGDLIKKEGFDVFELRSGCICCMMKQDFEDSLQKVIE
EYKPDRIIIEPTGISSLSQLLDILEKDNFKDKININRVITVVDSTSYLEEKDAFGEFYMDQVENAEILIVSKTQMVDKST
LKKVKESLRECNKKASIKTLAFEEFNKEYILNFLDEDSSRDIKRDSVEVMISTEDGFESLGVKTNKIFEIREINEIVSKL
FTGKYGDVIRIKGFLKGEKEIIQINCTKKVHNIETVEDSKEIKICIIGQDLRKRKIQFLFKEKYNIKKL
>Mature_309_residues
MIKVNLISGFLGAGKTTLIKKVLENVKEEKIVIIENEFGEVAIDGDLIKKEGFDVFELRSGCICCMMKQDFEDSLQKVIE
EYKPDRIIIEPTGISSLSQLLDILEKDNFKDKININRVITVVDSTSYLEEKDAFGEFYMDQVENAEILIVSKTQMVDKST
LKKVKESLRECNKKASIKTLAFEEFNKEYILNFLDEDSSRDIKRDSVEVMISTEDGFESLGVKTNKIFEIREINEIVSKL
FTGKYGDVIRIKGFLKGEKEIIQINCTKKVHNIETVEDSKEIKICIIGQDLRKRKIQFLFKEKYNIKKL

Specific function: Unknown

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=188, Percent_Identity=30.3191489361702, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI223941779, Length=188, Percent_Identity=30.3191489361702, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI126722884, Length=188, Percent_Identity=30.3191489361702, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI146231952, Length=188, Percent_Identity=30.8510638297872, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI148727351, Length=188, Percent_Identity=30.3191489361702, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI223941776, Length=178, Percent_Identity=29.2134831460674, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI119120938, Length=130, Percent_Identity=32.3076923076923, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1788499, Length=299, Percent_Identity=27.0903010033445, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI87082430, Length=263, Percent_Identity=27.3764258555133, Blast_Score=91, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6324356, Length=220, Percent_Identity=27.7272727272727, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 35616; Mature: 35616

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVNLISGFLGAGKTTLIKKVLENVKEEKIVIIENEFGEVAIDGDLIKKEGFDVFELRS
CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCHHCCCCCHHHHCC
GCICCMMKQDFEDSLQKVIEEYKPDRIIIEPTGISSLSQLLDILEKDNFKDKININRVIT
CCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEECCEEEEE
VVDSTSYLEEKDAFGEFYMDQVENAEILIVSKTQMVDKSTLKKVKESLRECNKKASIKTL
EEECCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AFEEFNKEYILNFLDEDSSRDIKRDSVEVMISTEDGFESLGVKTNKIFEIREINEIVSKL
HHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHCCCCCHHEEEHHHHHHHHHHH
FTGKYGDVIRIKGFLKGEKEIIQINCTKKVHNIETVEDSKEIKICIIGQDLRKRKIQFLF
HCCCCCCEEEEEEEECCCEEEEEEEECCHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
KEKYNIKKL
HHCCCCCCC
>Mature Secondary Structure
MIKVNLISGFLGAGKTTLIKKVLENVKEEKIVIIENEFGEVAIDGDLIKKEGFDVFELRS
CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCHHCCCCCHHHHCC
GCICCMMKQDFEDSLQKVIEEYKPDRIIIEPTGISSLSQLLDILEKDNFKDKININRVIT
CCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEECCEEEEE
VVDSTSYLEEKDAFGEFYMDQVENAEILIVSKTQMVDKSTLKKVKESLRECNKKASIKTL
EEECCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AFEEFNKEYILNFLDEDSSRDIKRDSVEVMISTEDGFESLGVKTNKIFEIREINEIVSKL
HHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHCCCCCHHEEEHHHHHHHHHHH
FTGKYGDVIRIKGFLKGEKEIIQINCTKKVHNIETVEDSKEIKICIIGQDLRKRKIQFLF
HCCCCCCEEEEEEEECCCEEEEEEEECCHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
KEKYNIKKL
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]