Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379457
Identifier: 148379457
GI number: 148379457
Start: 1617055
End: 1617615
Strand: Direct
Name: 148379457
Synonym: CBO1486
Alternate gene names: NA
Gene position: 1617055-1617615 (Clockwise)
Preceding gene: 148379456
Following gene: 148379458
Centisome position: 41.6
GC content: 25.67
Gene sequence:
>561_bases ATGAAAAGTTTTTTAAAAACATTACTTATTGTGTTAATATGCATAGTGATAGTGGGATTTGCATTTTTTAAGATGGCTAC TTACCAAGGAGAGAATTTAAGTGATAATTCCATTAAGAATGAAAATATACTAGACAAACTAAAGAACGTAGAACTTAGCA AGGGAACCTTAACTGTAAATGAAGAAGATGTAAATGAGATGCTAAAAGTTTATTTTCAAAATGAGAAAAATGTAGGAAGT ATATTAGTAAAATCTGTTAAGGTTGATACTAAAGACAATAAATTAAATTTATATGTGCCAGTTAGATATAATGGGATTGA TTTACTTATGTCATCTTATGGAGATGTAAGTGCAAGAGATGATAAAATAATTTATAAGGTAGATAGTATAAAAATGGGAA AAGTATCAGTACCTAAGAGTATTCTTCTAAATGAAATAAAAAAATCAAACATGAGTAATATTCAAAGCAATGGAGATGAG ATTATTATAGATAAGGGAATTACTAAAGTTAAAATAAAGGATATAAAAATCGAAGATGGTAAATTTAAAGTTAGTTTTTA A
Upstream 100 bases:
>100_bases TTGTGAAGAGTAAGGATGCTTTTAATATTGTGCAGAATAGTTTATAATAAAATAAATTTGGATTTAAAACATAGTAATAG ATGAAGGGGAAGATATAATT
Downstream 100 bases:
>100_bases AAATATAATTTTACTGTAGTTTTTTCAGTGCTTATATGATTTAATAGAAGATTAAAAATCATATAAGCACTGAAATTTTT TTGAAATAGAATATATACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKSFLKTLLIVLICIVIVGFAFFKMATYQGENLSDNSIKNENILDKLKNVELSKGTLTVNEEDVNEMLKVYFQNEKNVGS ILVKSVKVDTKDNKLNLYVPVRYNGIDLLMSSYGDVSARDDKIIYKVDSIKMGKVSVPKSILLNEIKKSNMSNIQSNGDE IIIDKGITKVKIKDIKIEDGKFKVSF
Sequences:
>Translated_186_residues MKSFLKTLLIVLICIVIVGFAFFKMATYQGENLSDNSIKNENILDKLKNVELSKGTLTVNEEDVNEMLKVYFQNEKNVGS ILVKSVKVDTKDNKLNLYVPVRYNGIDLLMSSYGDVSARDDKIIYKVDSIKMGKVSVPKSILLNEIKKSNMSNIQSNGDE IIIDKGITKVKIKDIKIEDGKFKVSF >Mature_186_residues MKSFLKTLLIVLICIVIVGFAFFKMATYQGENLSDNSIKNENILDKLKNVELSKGTLTVNEEDVNEMLKVYFQNEKNVGS ILVKSVKVDTKDNKLNLYVPVRYNGIDLLMSSYGDVSARDDKIIYKVDSIKMGKVSVPKSILLNEIKKSNMSNIQSNGDE IIIDKGITKVKIKDIKIEDGKFKVSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20965; Mature: 20965
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFLKTLLIVLICIVIVGFAFFKMATYQGENLSDNSIKNENILDKLKNVELSKGTLTVN CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCEECCCEEEEC EEDVNEMLKVYFQNEKNVGSILVKSVKVDTKDNKLNLYVPVRYNGIDLLMSSYGDVSARD HHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCEEEEEEEEEECCHHHHHHCCCCCCCCC DKIIYKVDSIKMGKVSVPKSILLNEIKKSNMSNIQSNGDEIIIDKGITKVKIKDIKIEDG CEEEEEECCEEECCCCCCHHHHHHHHHHCCHHHHHCCCCEEEEECCCEEEEEEEEEEECC KFKVSF EEEECC >Mature Secondary Structure MKSFLKTLLIVLICIVIVGFAFFKMATYQGENLSDNSIKNENILDKLKNVELSKGTLTVN CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCEECCCEEEEC EEDVNEMLKVYFQNEKNVGSILVKSVKVDTKDNKLNLYVPVRYNGIDLLMSSYGDVSARD HHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCEEEEEEEEEECCHHHHHHCCCCCCCCC DKIIYKVDSIKMGKVSVPKSILLNEIKKSNMSNIQSNGDEIIIDKGITKVKIKDIKIEDG CEEEEEECCEEECCCCCCHHHHHHHHHHCCHHHHHCCCCEEEEECCCEEEEEEEEEEECC KFKVSF EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA