| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is perR [H]
Identifier: 148379348
GI number: 148379348
Start: 1496713
End: 1497186
Strand: Direct
Name: perR [H]
Synonym: CBO1372
Alternate gene names: 148379348
Gene position: 1496713-1497186 (Clockwise)
Preceding gene: 148379347
Following gene: 148379349
Centisome position: 38.51
GC content: 23.84
Gene sequence:
>474_bases ATGAGTACACAATTAGACTATTTTAAAAATTTAATTGAGGAAAAAGGTTACAAATTTACTTTTCAAAAGAAAATAATATT AAAAACTTTAATGGAGAGTTCTATTCATTTAAATGTGGAGGAAATATATAATAAGATTAAGAAAAATAATATAGGAATTG CTACAGTTTATAGAAACCTAAAAGTATTTAAAAAACTTGGTATAGTGAAGGAATTGAATATCAACGCTGTAAATTACTAC GAAATGAAACTATTTAGTAGAAAACCCTTGCATACACATTTTAAATGTTTAAAATGTAATAGTATAATAGATATTGATAA TAATAAATTAGATTTAGAATATTTAAAATTAAATAGATCTATAGAACATAGTGAAGACTTAGAAATTCGTGATGCTAATA TATTATTTTTAGGGTTATGTAGTAGATGCAAGGAGGAAGAGAAATGCCAAGACCAACAAAGTTTAGAAGAGTAG
Upstream 100 bases:
>100_bases TAAAGGGAGTAATAAAATTGAAAATAGCATGTGTAAGTGATGGAAAGAATATTAGTGGTCATTTTGGTCATTGTAATGAA TAATTTCGGGAAATGATTAT
Downstream 100 bases:
>100_bases AATTTTTCCCAGAGAATAATTATTTTGTGCCCTGGGGGAAACCCAAATGTGAAATACATGAGGTAGTATTAAAAGTTGAA GAATTAGAGGCTATGAGACT
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSTQLDYFKNLIEEKGYKFTFQKKIILKTLMESSIHLNVEEIYNKIKKNNIGIATVYRNLKVFKKLGIVKELNINAVNYY EMKLFSRKPLHTHFKCLKCNSIIDIDNNKLDLEYLKLNRSIEHSEDLEIRDANILFLGLCSRCKEEEKCQDQQSLEE
Sequences:
>Translated_157_residues MSTQLDYFKNLIEEKGYKFTFQKKIILKTLMESSIHLNVEEIYNKIKKNNIGIATVYRNLKVFKKLGIVKELNINAVNYY EMKLFSRKPLHTHFKCLKCNSIIDIDNNKLDLEYLKLNRSIEHSEDLEIRDANILFLGLCSRCKEEEKCQDQQSLEE >Mature_156_residues STQLDYFKNLIEEKGYKFTFQKKIILKTLMESSIHLNVEEIYNKIKKNNIGIATVYRNLKVFKKLGIVKELNINAVNYYE MKLFSRKPLHTHFKCLKCNSIIDIDNNKLDLEYLKLNRSIEHSEDLEIRDANILFLGLCSRCKEEEKCQDQQSLEE
Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18628; Mature: 18497
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQLDYFKNLIEEKGYKFTFQKKIILKTLMESSIHLNVEEIYNKIKKNNIGIATVYRNL CCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH KVFKKLGIVKELNINAVNYYEMKLFSRKPLHTHFKCLKCNSIIDIDNNKLDLEYLKLNRS HHHHHHCCCEECCCCEEEEEEEEECCCCCCHHHHEEEECCCEEECCCCEEEHHHEEECCC IEHSEDLEIRDANILFLGLCSRCKEEEKCQDQQSLEE CCCCCCCEEECCCCCEEHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure STQLDYFKNLIEEKGYKFTFQKKIILKTLMESSIHLNVEEIYNKIKKNNIGIATVYRNL CCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH KVFKKLGIVKELNINAVNYYEMKLFSRKPLHTHFKCLKCNSIIDIDNNKLDLEYLKLNRS HHHHHHCCCEECCCCEEEEEEEEECCCCCCHHHHEEEECCCEEECCCCEEEHHHEEECCC IEHSEDLEIRDANILFLGLCSRCKEEEKCQDQQSLEE CCCCCCCEEECCCCCEEHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA