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The map label for this gene is yfeT [C]

Identifier: 148379321

GI number: 148379321

Start: 1466467

End: 1467312

Strand: Direct

Name: yfeT [C]

Synonym: CBO1342

Alternate gene names: 148379321

Gene position: 1466467-1467312 (Clockwise)

Preceding gene: 148379318

Following gene: 148379322

Centisome position: 37.73

GC content: 27.66

Gene sequence:

>846_bases
ATGGGAGTTCTTTTAAGAATAAGAGAAAATTTTGATTCTATGACTAAATCAGAAAAAAAAATAGCAGAATATATTTTTAA
AAGTCCAAGAGATATAATAAGTGATTCTGCCCAAGAAATAGCAATCAAAACAAGTACTTCTCCAGCATCCGTTATTAGAT
TTACTAAAAAAGTAGGATATAATTCTCTTAATGAATTTAAATTTGCACTTGTTGCAGAAGAATATACTAAAGAAAGTACA
GAGCTTGATTATATAATAAATTATAATGATAGTATAGATTCAATTATTAATAAACTTGGAAATAAAATGATTGACACCAT
AAATGATACTAAGGAATTAGTAGATGATGAAAAATTGTTAGAAGCTGTTAAAGCAATAAAAAATGCGGAAACAATTTACC
TATATGGTGTTGGAGCATCTGCTATGGTGGCTATGGATTTTCAATATAAATTGCTTAGAATAAATAAAAAGGTAATGTTC
CAACAGGATTCACATCTGCAGTTAGCAGTATCAGTGCATATTACAAATAGAGATGTTGCTGTAGCTATTTCATATAGTGG
AAATACAAGAGAAGTAAATTTAGCAGTAGAGGAAGCGAAAAAAAATGGTGCTACCACTATAGCTATAACTAAATGTGGAA
AAAGCATTTTAAGCAATATTGCGGATATAAATTTAAATATACCCAGTATAGAAAAAGATTTGAGAATAGGGGCAATTTCT
TCTAGAACATCTCAATTATTTGTAACTGATAGTTTGTTTTTAGGAATTGCAAAGGAAAATTTGGATAAAACAGAAAAGAA
TTTAATTAATACAAGAAATTTAGTAGAAGTTTTAAAAAGAGAATAG

Upstream 100 bases:

>100_bases
ATAAACTAAATATTGAATTATATTTAGGTTGATGGAATTAATTAAAAGATTGAAGTTTGTATAATATTTAGAAACAAATA
ATAGAAAACTGAGGTGAAGT

Downstream 100 bases:

>100_bases
ATTATAAAACTTTTTATTTTAAACTGAAAAGTTAATCTAGATGGTGAAGCAATGAGTATAAAAATTCATTGCTTTTATTT
TATTTAAACATAAGAACGAA

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MGVLLRIRENFDSMTKSEKKIAEYIFKSPRDIISDSAQEIAIKTSTSPASVIRFTKKVGYNSLNEFKFALVAEEYTKEST
ELDYIINYNDSIDSIINKLGNKMIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF
QQDSHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAIS
SRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLKRE

Sequences:

>Translated_281_residues
MGVLLRIRENFDSMTKSEKKIAEYIFKSPRDIISDSAQEIAIKTSTSPASVIRFTKKVGYNSLNEFKFALVAEEYTKEST
ELDYIINYNDSIDSIINKLGNKMIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF
QQDSHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAIS
SRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLKRE
>Mature_280_residues
GVLLRIRENFDSMTKSEKKIAEYIFKSPRDIISDSAQEIAIKTSTSPASVIRFTKKVGYNSLNEFKFALVAEEYTKESTE
LDYIINYNDSIDSIINKLGNKMIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQ
QDSHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAISS
RTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLKRE

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=285, Percent_Identity=32.6315789473684, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI87082130, Length=281, Percent_Identity=30.2491103202847, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI87082369, Length=279, Percent_Identity=26.8817204301075, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1788159, Length=281, Percent_Identity=28.1138790035587, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31444; Mature: 31313

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLLRIRENFDSMTKSEKKIAEYIFKSPRDIISDSAQEIAIKTSTSPASVIRFTKKVGY
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHCC
NSLNEFKFALVAEEYTKESTELDYIINYNDSIDSIINKLGNKMIDTINDTKELVDDEKLL
CCHHHHHHEEEEHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
EAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVA
HHHHHHCCCCEEEEEEECCCEEEEECCCEEEEEECHHHEEECCCCEEEEEEEEEECCCEE
VAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAIS
EEEEECCCCEEEEEEEEHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC
SRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLKRE
CCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVLLRIRENFDSMTKSEKKIAEYIFKSPRDIISDSAQEIAIKTSTSPASVIRFTKKVGY
CEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHCC
NSLNEFKFALVAEEYTKESTELDYIINYNDSIDSIINKLGNKMIDTINDTKELVDDEKLL
CCHHHHHHEEEEHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
EAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVA
HHHHHHCCCCEEEEEEECCCEEEEECCCEEEEEECHHHEEECCCCEEEEEEEEEECCCEE
VAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAIS
EEEEECCCCEEEEEEEEHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC
SRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLKRE
CCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]