Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is trkG [H]
Identifier: 148379298
GI number: 148379298
Start: 1437105
End: 1438550
Strand: Direct
Name: trkG [H]
Synonym: CBO1319
Alternate gene names: 148379298
Gene position: 1437105-1438550 (Clockwise)
Preceding gene: 148379297
Following gene: 148379299
Centisome position: 36.97
GC content: 30.91
Gene sequence:
>1446_bases ATGAACTACCCAATAGTATTTAAAGTATTAGGAGATGTAATAAAATATGAAGCTTTAGTTATGATATTTCCTCTTATAGC GTCCTTATATTATGGTGGCAAGGATGCTAATAGTTTTATAATAACTATTGCAATAATGCTGTGTACTGCAGTTATAATGT CAAATATTAGACCTAAAAATAGAACTTTTTATGCTAAAGAAGGTTTTTTATCTGTTTCTGTTTGTTGGATAGTTATATCT TTATTTGGAGCATTACCATTTTATATAAGTGGAGCGATACCTTCCTTTGTAGATTGTATATTTGAAACAGTGTCAGGCTT TACAACTACAGGAGCTACTATTTTAACAGAAGTGGAATCTTTATCTAAGGGAATATTGTTTTGGAGAAGTTTTACACATT GGATAGGTGGTATGGGAATATTAATATTTACATTAGCATTAATGCCTTCTATAGGTGGTACTACAATTCATCTTTTAAAG GCAGAAAGTCCAGGGCCTACTCCAGGGAAAATTGTTCCAAGGATAAAAGAAACAGCTAAAATAATGTATTTAATATATTT TGCTATGACTATATTACAAATAAGTTTACTTTTAATTGCAGGGATGGAACCTTATGATGCATTAATACATGCCTTTGGTA CAGCTGGTACTGGAGGATTTTCCAATATGAATAGTAGTGTAGGAGCATATAATAATGTATATATAGAAGTTATAATAACA GTGTTTATGTTATTGTTCGGTGTTAATTTTAATGTATATTTTCAACTAATAGCAGGAAATATTAAACAAGCTTTTAAAAA TGAAGAAGTGAAATATTATATAGGTATGGTATTGATTGCTATGACAATAATAGCTTTTAATATTAAAGGAATGTATGGGG GATCTTTAAAGGAAGGTTTTAGGCAATCATCTTTCCAAGTAGCCTCTATTGTAACCACTACAGGTTATGCTACTACTAAT TTTGATTTGTGGCCAACCCTTAGTAAATCAATATTAGCTTTATTAATGCTTACAGGATGTTGTGCAGGTTCTACCGGTGG GGGAATTAAAACTGTTCGTATAGTACTTTTGTTTAAAGCTATGAAAAGAGAAATAAGTAAAATTATTCATCCTAGAATGG TTAATTCAGTAAAACTAGATGGTAAGGTTGTAGAGGATGAAACCATATCGCAGGTTGGATTATTTGTATTTGCCTACGTT AGTATAATTGTAATAGCAGTACTTTTAGTATCTATAGATGGTATGGATATGGAGACCACACTTTCTTCTGTGCTTGCAAC TATAGGTAATATAGGACCTGGTTTTAAGGTGGTAGGACCTATAGGTAATTTTAGCAGCTATTCATCTTTTAGCAAAATAG TATTTTCATTTTGTATGTTAGCAGGAAGATTAGAAATATATCCAATGCTAGTAATGTTAAGTCCTTCGAGTATGAGAAAA ATATAA
Upstream 100 bases:
>100_bases ATGGTGAGGATTCCATAAAAGATGGTGATAATGTCATTATAGTAACGGAAGAAAATAATATAATGGATATTAATAATATA CTAGAGGGAGGAAACTTAAT
Downstream 100 bases:
>100_bases TATAGTTTAACTGATAGTAATAGAAGAGTAATAGATAGATTTAATTTTAAAAGGACAAATATAAAAAATATACTTCATGT ATCTTACTTATATGTTTAGT
Product: Trk system potassium uptake protein TrkH
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MNYPIVFKVLGDVIKYEALVMIFPLIASLYYGGKDANSFIITIAIMLCTAVIMSNIRPKNRTFYAKEGFLSVSVCWIVIS LFGALPFYISGAIPSFVDCIFETVSGFTTTGATILTEVESLSKGILFWRSFTHWIGGMGILIFTLALMPSIGGTTIHLLK AESPGPTPGKIVPRIKETAKIMYLIYFAMTILQISLLLIAGMEPYDALIHAFGTAGTGGFSNMNSSVGAYNNVYIEVIIT VFMLLFGVNFNVYFQLIAGNIKQAFKNEEVKYYIGMVLIAMTIIAFNIKGMYGGSLKEGFRQSSFQVASIVTTTGYATTN FDLWPTLSKSILALLMLTGCCAGSTGGGIKTVRIVLLFKAMKREISKIIHPRMVNSVKLDGKVVEDETISQVGLFVFAYV SIIVIAVLLVSIDGMDMETTLSSVLATIGNIGPGFKVVGPIGNFSSYSSFSKIVFSFCMLAGRLEIYPMLVMLSPSSMRK I
Sequences:
>Translated_481_residues MNYPIVFKVLGDVIKYEALVMIFPLIASLYYGGKDANSFIITIAIMLCTAVIMSNIRPKNRTFYAKEGFLSVSVCWIVIS LFGALPFYISGAIPSFVDCIFETVSGFTTTGATILTEVESLSKGILFWRSFTHWIGGMGILIFTLALMPSIGGTTIHLLK AESPGPTPGKIVPRIKETAKIMYLIYFAMTILQISLLLIAGMEPYDALIHAFGTAGTGGFSNMNSSVGAYNNVYIEVIIT VFMLLFGVNFNVYFQLIAGNIKQAFKNEEVKYYIGMVLIAMTIIAFNIKGMYGGSLKEGFRQSSFQVASIVTTTGYATTN FDLWPTLSKSILALLMLTGCCAGSTGGGIKTVRIVLLFKAMKREISKIIHPRMVNSVKLDGKVVEDETISQVGLFVFAYV SIIVIAVLLVSIDGMDMETTLSSVLATIGNIGPGFKVVGPIGNFSSYSSFSKIVFSFCMLAGRLEIYPMLVMLSPSSMRK I >Mature_481_residues MNYPIVFKVLGDVIKYEALVMIFPLIASLYYGGKDANSFIITIAIMLCTAVIMSNIRPKNRTFYAKEGFLSVSVCWIVIS LFGALPFYISGAIPSFVDCIFETVSGFTTTGATILTEVESLSKGILFWRSFTHWIGGMGILIFTLALMPSIGGTTIHLLK AESPGPTPGKIVPRIKETAKIMYLIYFAMTILQISLLLIAGMEPYDALIHAFGTAGTGGFSNMNSSVGAYNNVYIEVIIT VFMLLFGVNFNVYFQLIAGNIKQAFKNEEVKYYIGMVLIAMTIIAFNIKGMYGGSLKEGFRQSSFQVASIVTTTGYATTN FDLWPTLSKSILALLMLTGCCAGSTGGGIKTVRIVLLFKAMKREISKIIHPRMVNSVKLDGKVVEDETISQVGLFVFAYV SIIVIAVLLVSIDGMDMETTLSSVLATIGNIGPGFKVVGPIGNFSSYSSFSKIVFSFCMLAGRLEIYPMLVMLSPSSMRK I
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA. TrkE increases the affinity of the system [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=481, Percent_Identity=32.8482328482328, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI48994987, Length=488, Percent_Identity=34.8360655737705, Blast_Score=251, Evalue=5e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 52404; Mature: 52404
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYPIVFKVLGDVIKYEALVMIFPLIASLYYGGKDANSFIITIAIMLCTAVIMSNIRPKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC RTFYAKEGFLSVSVCWIVISLFGALPFYISGAIPSFVDCIFETVSGFTTTGATILTEVES CEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH LSKGILFWRSFTHWIGGMGILIFTLALMPSIGGTTIHLLKAESPGPTPGKIVPRIKETAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH IMYLIYFAMTILQISLLLIAGMEPYDALIHAFGTAGTGGFSNMNSSVGAYNNVYIEVIIT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH VFMLLFGVNFNVYFQLIAGNIKQAFKNEEVKYYIGMVLIAMTIIAFNIKGMYGGSLKEGF HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RQSSFQVASIVTTTGYATTNFDLWPTLSKSILALLMLTGCCAGSTGGGIKTVRIVLLFKA HHCCCHHHHHEEECCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH MKREISKIIHPRMVNSVKLDGKVVEDETISQVGLFVFAYVSIIVIAVLLVSIDGMDMETT HHHHHHHHHCHHHHCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LSSVLATIGNIGPGFKVVGPIGNFSSYSSFSKIVFSFCMLAGRLEIYPMLVMLSPSSMRK HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEECCHHHCC I C >Mature Secondary Structure MNYPIVFKVLGDVIKYEALVMIFPLIASLYYGGKDANSFIITIAIMLCTAVIMSNIRPKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC RTFYAKEGFLSVSVCWIVISLFGALPFYISGAIPSFVDCIFETVSGFTTTGATILTEVES CEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH LSKGILFWRSFTHWIGGMGILIFTLALMPSIGGTTIHLLKAESPGPTPGKIVPRIKETAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH IMYLIYFAMTILQISLLLIAGMEPYDALIHAFGTAGTGGFSNMNSSVGAYNNVYIEVIIT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH VFMLLFGVNFNVYFQLIAGNIKQAFKNEEVKYYIGMVLIAMTIIAFNIKGMYGGSLKEGF HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RQSSFQVASIVTTTGYATTNFDLWPTLSKSILALLMLTGCCAGSTGGGIKTVRIVLLFKA HHCCCHHHHHEEECCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH MKREISKIIHPRMVNSVKLDGKVVEDETISQVGLFVFAYVSIIVIAVLLVSIDGMDMETT HHHHHHHHHCHHHHCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LSSVLATIGNIGPGFKVVGPIGNFSSYSSFSKIVFSFCMLAGRLEIYPMLVMLSPSSMRK HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEECCHHHCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2022616; 9097039; 9278503 [H]