Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379288
Identifier: 148379288
GI number: 148379288
Start: 1427524
End: 1428318
Strand: Direct
Name: 148379288
Synonym: CBO1309
Alternate gene names: NA
Gene position: 1427524-1428318 (Clockwise)
Preceding gene: 148379287
Following gene: 148379289
Centisome position: 36.73
GC content: 21.51
Gene sequence:
>795_bases ATGGCATACGACATAAAATTAAAAAATAAGAATGAAGAAGAATTAGAAAGAATTGCAAATATTATTATGAATTTATTTTT GTATCAAGTAGTATTTTTTATAATATTTATTATGTTAGCAAATATTTTAGGATATGTGGGATTAAATAAAAATATTATAC AACCTTATAGTAAATTAGCAGGGGAAATTTTAGCATATATATTTTTTATTAAGAATTATATTAAAGACAATAGATATAAA TTAAAATTTAAAAATACATTACATTTTAAAGGATATGTTTTTATAGCAATGCTAATTATAGGGTATATTTTGGTCTATGA TAATACAATTGATATAGTTTTATCAAAGGTTGTAAAAAATAGTTGGTTCTATGATGTTATGACTAAAGAAATGAAAAATC CAATAGTAGGATTTATAGGAACAGTGATTATGGCACCTATTTTTGAGGAGATAGTTTATAGAGGAATAATGTTAGATGAG CTATTGGTTAAATACAATTATAAAAAAGCTATAATTATTTCTGCATTAATATTTGCAGCAATTCATCTTAATTTTGTTCA ACTAACAGATGCTTTTATTGCAGGTATCATCCTTGGGACTGTTTATTGTAAAACTAAATGTTTAATTCCATGTATTATAA TTCATTTTTTAAATAACTTATTTTGCAATATAGCTAAATTTTATCCCAGTATATATAAAACTAAATTTAATATTATAAGA TTAGGTATTGGAATAGCTATTTTAGCAACATTAGCATATATTTTTTTAAAAGATAGAAAAAAAGTTATTTTATAG
Upstream 100 bases:
>100_bases GTAAAATATATATAAATAAAGATATATATACATAAATGAAAAATGTATATTTAAAATACTAATAATGTAATATAATGTAG TTAATAAATAGGGGGGTAAA
Downstream 100 bases:
>100_bases CAAAATCATATCTAATGTTTTAAAGAGGATAATCATAATTTCAAGGTTAATTAATTTGTTTCTCCAAAATTAAAACATAT ATTGCTAATTACAAATTAGA
Product: membrane-associated protease
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family; Caax Amino Protease Family Protein; Membrane-Associated Protease
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLAGEILAYIFFIKNYIKDNRYK LKFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKNSWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDE LLVKYNYKKAIIISALIFAAIHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIR LGIGIAILATLAYIFLKDRKKVIL
Sequences:
>Translated_264_residues MAYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLAGEILAYIFFIKNYIKDNRYK LKFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKNSWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDE LLVKYNYKKAIIISALIFAAIHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIR LGIGIAILATLAYIFLKDRKKVIL >Mature_263_residues AYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLAGEILAYIFFIKNYIKDNRYKL KFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKNSWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDEL LVKYNYKKAIIISALIFAAIHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIRL GIGIAILATLAYIFLKDRKKVIL
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30618; Mature: 30486
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLA CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GEILAYIFFIKNYIKDNRYKLKFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKN HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC SWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDELLVKYNYKKAIIISALIFAA CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIGIAILATLAYIFLKDRKKVIL HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLA CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GEILAYIFFIKNYIKDNRYKLKFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKN HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC SWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDELLVKYNYKKAIIISALIFAA CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIGIAILATLAYIFLKDRKKVIL HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA