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The map label for this gene is ydaM [H]

Identifier: 148379278

GI number: 148379278

Start: 1412204

End: 1413466

Strand: Direct

Name: ydaM [H]

Synonym: CBO1297

Alternate gene names: 148379278

Gene position: 1412204-1413466 (Clockwise)

Preceding gene: 148379277

Following gene: 148379279

Centisome position: 36.33

GC content: 26.13

Gene sequence:

>1263_bases
ATGGAAAGCTTAAATTGGGTAGATTATTTGTTTATTTTTTCTTTAGTTTCAATATGGATGCTGCTGTTTGTAAATATAAT
TTTATCTTTAGCTGGATATAGATATTATTTAAAGACTTTAAACAGTGAACTTAAAGGATTAGAGAATGAAAAATATCCTA
AGGTATCTATATTAGTACCTGCTCATAATGAGGAAAAGGTAATAGGAAGAACGGTAAAATCTATCTTGCTTTTAAATTAT
CCTAAAGATAAAATGGAGCTTATTGTTATAAATGATAATTCCTCAGATAACACTAAAGAAATACTAAAACAAATTCAAAA
AGAATACAGATCTTATAATTTTAAAATAATAAATACAGATAATATAACAGGAGGAAGGGGTAAGTCTAATGCTTTAAATA
TAGGCTATAAACATTCAAGTGGAGACTTTATAGCCGTATATGATGCAGATAATACTCCAGATAAAAATGCATTAAAATAT
CTTATGAAAACTATAATTGAGGACGAAGGTTTAGGAGCAGTTATAGGAAAGTTTAGAACTAGAAATAAAGACAGAAATAT
GTTAACAAGATTTATAAATATAGAGACCTTAAGTTTTCAATGGATGTGCCAAGCAGGAAGATGGAAGTTATTAAATTTAT
GTACTATACCTGGCACTAATTTTGTAGTAAGAAAGAATATAATACAAGAGTTGAATGGATGGGATCCAAAAGCTATAGCA
GAAGATACAGAGATAAGTTTTAGAATATATGAGTTAGGATATAAAATAAAATTTGTACCATACTCTGTAACTTGGGAACA
GGAGCCAGAGAATTTAAAGGTTTGGTTTAAACAAAGAACTAGATGGGCTAAAGGTAATATTTATGTGCTTTTAAAATATT
TTAAAAACATGTTTAAAGGAACTAGTAAAGATATAATATTTGATATTTTTTATTTTTTTTCAGTGTACTTTTTATTTTTA
TCCTCTGTAATAATATCTGATATTTTATTTATTGTTGGTATTTTTTTAAATATAAATTTACATGTTACAGGAAATTTTAA
TGTTCTTTGGATATTAGCCTATGTGCTTTTTGTTTTAGAAGTAAGTTTAACTCTAACATTAGAAAAAGGGGAAAGCAATA
AGGAAAATTTAATACTTGTACCTATTATGTATTTTACATATTGTCAAATGTGGATGATAGTTGCCCTTAGAGGAATAATT
CAATATATTCTGGATAAATTGTTTAAAAAAGAAATTAAATGGTACAAGACAGAAAGATTTTAA

Upstream 100 bases:

>100_bases
TTATAGTTATAATGATGGTTATTGTATTTGTTACTATATTTATCATTATGTTTTTTGTATCTAAGAAAAAGGATAAAAAT
AAATTTTTAAGGTGATAAAC

Downstream 100 bases:

>100_bases
AAAGAAAAATAAAAAACACATAGAAAAATTAATAAAAGAATTATCAATTATAAAATATGAGAGTATGAAATGGAATAAAT
AATATAAAAAGAAAGGTAGG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVPAHNEEKVIGRTVKSILLLNY
PKDKMELIVINDNSSDNTKEILKQIQKEYRSYNFKIINTDNITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKY
LMKTIIEDEGLGAVIGKFRTRNKDRNMLTRFINIETLSFQWMCQAGRWKLLNLCTIPGTNFVVRKNIIQELNGWDPKAIA
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKGTSKDIIFDIFYFFSVYFLFL
SSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLEVSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGII
QYILDKLFKKEIKWYKTERF

Sequences:

>Translated_420_residues
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVPAHNEEKVIGRTVKSILLLNY
PKDKMELIVINDNSSDNTKEILKQIQKEYRSYNFKIINTDNITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKY
LMKTIIEDEGLGAVIGKFRTRNKDRNMLTRFINIETLSFQWMCQAGRWKLLNLCTIPGTNFVVRKNIIQELNGWDPKAIA
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKGTSKDIIFDIFYFFSVYFLFL
SSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLEVSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGII
QYILDKLFKKEIKWYKTERF
>Mature_420_residues
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVPAHNEEKVIGRTVKSILLLNY
PKDKMELIVINDNSSDNTKEILKQIQKEYRSYNFKIINTDNITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKY
LMKTIIEDEGLGAVIGKFRTRNKDRNMLTRFINIETLSFQWMCQAGRWKLLNLCTIPGTNFVVRKNIIQELNGWDPKAIA
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKGTSKDIIFDIFYFFSVYFLFL
SSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLEVSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGII
QYILDKLFKKEIKWYKTERF

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=373, Percent_Identity=24.9329758713137, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87082284, Length=364, Percent_Identity=24.4505494505494, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1786560, Length=322, Percent_Identity=22.360248447205, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 49365; Mature: 49365

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
AHNEEKVIGRTVKSILLLNYPKDKMELIVINDNSSDNTKEILKQIQKEYRSYNFKIINTD
CCCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
NITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKYLMKTIIEDEGLGAVIGKFRT
CCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHC
RNKDRNMLTRFINIETLSFQWMCQAGRWKLLNLCTIPGTNFVVRKNIIQELNGWDPKAIA
CCCCHHHHHHHEEEEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKG
CCCCEEEEEEEECEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCC
TSKDIIFDIFYFFSVYFLFLSSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHH
VSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGIIQYILDKLFKKEIKWYKTERF
HHEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELKGLENEKYPKVSILVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
AHNEEKVIGRTVKSILLLNYPKDKMELIVINDNSSDNTKEILKQIQKEYRSYNFKIINTD
CCCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
NITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKYLMKTIIEDEGLGAVIGKFRT
CCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHC
RNKDRNMLTRFINIETLSFQWMCQAGRWKLLNLCTIPGTNFVVRKNIIQELNGWDPKAIA
CCCCHHHHHHHEEEEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
EDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTRWAKGNIYVLLKYFKNMFKG
CCCCEEEEEEEECEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCC
TSKDIIFDIFYFFSVYFLFLSSVIISDILFIVGIFLNINLHVTGNFNVLWILAYVLFVLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHH
VSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGIIQYILDKLFKKEIKWYKTERF
HHEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]