Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
---|---|
Accession | NC_009495 |
Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148379261
Identifier: 148379261
GI number: 148379261
Start: 1392788
End: 1393480
Strand: Direct
Name: 148379261
Synonym: CBO1280
Alternate gene names: NA
Gene position: 1392788-1393480 (Clockwise)
Preceding gene: 148379260
Following gene: 148379264
Centisome position: 35.83
GC content: 22.66
Gene sequence:
>693_bases ATGGAGATATTTGAGGATGAGCTCAATAAGTTAACTTATTGTACAGAGGTGACAACCGCTAAATCATTAAATAAATTTAC AGACAAAATAAAAGTATTTTATTATAAATATATAACAGGAGAAAGTTATTTTGATTTTTATTTTGGGAGAACATATAAAG GCAAATTAATAGAAAATAAATTTTATATGTTTAAAGAAGATTTAAGATTATATATTCATTTTCTGAAAAACTTTTATAAT GTTTTAAGAATAACCGTTAATAAACAATCAGATATTATACATTATTTTTTTATTAAAGATCAAGGAGAAATATGTATATC TTTAATAGGAGAGGATTATGTGAAGTTGGCCTCAGAAGATAATAGTAAAGCTAGAGTATTTTTTTTATTAAATAAAGATG AACTATCCTATTATATAACAGTTATGGAAAATATATATTATGAGAGAAATGTAATTAATGGACTAGATTACTTAAAGAAT TCTTTAGATGAGGCTAATGGAAAAGGCTATAATAAAGAAAATAATAAAAATTTAGAAAAGGAAGTAAATAGAGATTATGT ATTAAGCCAAAGAGAAAAAAACAATGTATATCTACAAGCATTATATGCTTTGGTGGATGAAGCTTTAGATAGAAAAGATA AGAAGACCTTTTATTCTATATGTGATCAAATGAAAAAATATAATAAAAAATAA
Upstream 100 bases:
>100_bases GTAATAAAACTTATTAGAAATGGAATGAAAAACATTAATAATTATCGTAAATTTATATAAAAATAGGGAGAGGTATAAGA GTATCATGGAAGTTAAATAT
Downstream 100 bases:
>100_bases ACTATATAAAATTTAAAACCCCTTGATAGCAAAATTAAATACAAGACAAGGGGCTTTATTTTAAATTTTATTAAGCATTA CATTGGTCATATTCATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYYKYITGESYFDFYFGRTYKGKLIENKFYMFKEDLRLYIHFLKNFYN VLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVKLASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGLDYLKN SLDEANGKGYNKENNKNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYSICDQMKKYNKK
Sequences:
>Translated_230_residues MEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYYKYITGESYFDFYFGRTYKGKLIENKFYMFKEDLRLYIHFLKNFYN VLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVKLASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGLDYLKN SLDEANGKGYNKENNKNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYSICDQMKKYNKK >Mature_230_residues MEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYYKYITGESYFDFYFGRTYKGKLIENKFYMFKEDLRLYIHFLKNFYN VLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVKLASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGLDYLKN SLDEANGKGYNKENNKNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYSICDQMKKYNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27711; Mature: 27711
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYYKYITGESYFDFYFGRTYKGKLIENK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHCCCCCCCCEECCH FYMFKEDLRLYIHFLKNFYNVLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVKLASED HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCEEEEEHHHHHHHHHCCC NSKARVFFLLNKDELSYYITVMENIYYERNVINGLDYLKNSLDEANGKGYNKENNKNLEK CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH EVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYSICDQMKKYNKK HCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYYKYITGESYFDFYFGRTYKGKLIENK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHCCCCCCCCEECCH FYMFKEDLRLYIHFLKNFYNVLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVKLASED HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCEEEEEHHHHHHHHHCCC NSKARVFFLLNKDELSYYITVMENIYYERNVINGLDYLKNSLDEANGKGYNKENNKNLEK CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH EVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYSICDQMKKYNKK HCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA