Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
---|---|
Accession | NC_009495 |
Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is ytrH [H]
Identifier: 148379258
GI number: 148379258
Start: 1391148
End: 1391486
Strand: Direct
Name: ytrH [H]
Synonym: CBO1277
Alternate gene names: 148379258
Gene position: 1391148-1391486 (Clockwise)
Preceding gene: 148379257
Following gene: 148379259
Centisome position: 35.79
GC content: 33.04
Gene sequence:
>339_bases ATGAAGGGATTTTTAGGAAATTTAGTATATAGCTTTATGGTATCCTTTGGAGTAATAATAGGAGCAAGTGCTTTTTCAGG TATTGCTGCAATCTTATTAAATCATCCTCCTTTAAAAATTATGTCGGATCTCTCCAATTCTATAAAAATATGGGCAGTAG CTACAGCTTTAGGGGGAACATTTTCCTCTTTTTCTATTTTGGAAGAAGGAATATTTAGAGGGGAGTTAAGAGGGATGCTA AAACAAATATTTTATATTCTTGCCTCCCTAATAGGTGCTAACTTAGCGGTAAATAGCATAGAACTTTTACAAAAATGGGG AGAATATTTCAATAGATGA
Upstream 100 bases:
>100_bases GTAAAAAACAAATTATTTATGTAATAGCATAGAGGGGAATAAAAAATAATACTAAATCATAAATTTATAAAGATATATAA TGCTTTTATAGGTGAATTTT
Downstream 100 bases:
>100_bases ATAAAGAAAATAAATATTTTTTTTCTTTCTGTGTAGGGTTAGTTATAGGAGGGACAGTAGGCATAATTTTCTTTAGTTTG TTTATAAGTTATAGGATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKGFLGNLVYSFMVSFGVIIGASAFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGTFSSFSILEEGIFRGELRGML KQIFYILASLIGANLAVNSIELLQKWGEYFNR
Sequences:
>Translated_112_residues MKGFLGNLVYSFMVSFGVIIGASAFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGTFSSFSILEEGIFRGELRGML KQIFYILASLIGANLAVNSIELLQKWGEYFNR >Mature_112_residues MKGFLGNLVYSFMVSFGVIIGASAFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGTFSSFSILEEGIFRGELRGML KQIFYILASLIGANLAVNSIELLQKWGEYFNR
Specific function: Involved in sporulation. May contribute to cortex formation or stability [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane; Multi-pass membrane protein (Potential). Note=Shortly after the initiation of the engulfment, is localized to the sporulation septum. During later stages of sporulation, remains associated with the forespore outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12179; Mature: 12179
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFLGNLVYSFMVSFGVIIGASAFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCC FSSFSILEEGIFRGELRGMLKQIFYILASLIGANLAVNSIELLQKWGEYFNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKGFLGNLVYSFMVSFGVIIGASAFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCC FSSFSILEEGIFRGELRGMLKQIFYILASLIGANLAVNSIELLQKWGEYFNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 12662922 [H]