Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379224
Identifier: 148379224
GI number: 148379224
Start: 1358666
End: 1359715
Strand: Direct
Name: 148379224
Synonym: CBO1241
Alternate gene names: NA
Gene position: 1358666-1359715 (Clockwise)
Preceding gene: 148379222
Following gene: 148379225
Centisome position: 34.95
GC content: 36.86
Gene sequence:
>1050_bases TTGGTAATTTTTAAAGGGACTTTATTATTATTAATCTGTTTAAGCGCATTTTCTTTATTTAGTTTAAAAGCGCCAAAAGG AATGAAGGCTATGGGAGCTTTAGCAGATGCAGCAGTAGCTACTTTTCTTGTAGAGGCATTTCAAAGTTATGTAGGCGGAG ACATGTTACATATTAAATTATTAAAAGATACTGGACTAGCAGCAGGTGGAATGGGCGGAGCAGCAGCAGCTACTTTAGTT CCATTAGCATTAGGGGTTTCACCAGTATATGCTGTATTAATAGGAGCTTCATGTTATGGGTTAGGTATATTACCAGGTTT TGTAGCTGGTTATGCGCTTTCTTTTATAGTTCCTATAATAGAGAAGAAAGTACCAAAAGGGTTAGATTTAATTGTCTGTG TGGCTTTAGTAGCACCTTTAGCTAGATTGATAGGAAATGGGGCTACTCCAGTTGTAAATTCTACACTATTAAATATAGGT GGTATAATAACAGTAGCAGCTAATGAAAGCCCAATTATAATGGGATTTATACTAGGTGGAGTTATAACAGTAGTTGCAAC AGCACCATTGAGTTCTATGGCGCTAACAGCCATGTTAGGACTTAAGGGATTGCCAATGGCTATAGGTGCCCTTTCTGTAA TGGGATCTTCTTTTATGAATTTTGTGTTATTTCACAGATTAAAATTTGGGGATAGAAGTACAACCATATCAGTGGCAATA GAACCTTTGACTCAGGCGGATGTAATTTCAGCAAATCCTATACCTGTATATGTTACAAACTTTATAGGCGGTGGACTTGC AGGCATTATAGTAACTCACTTTGGATTAATAAATAATGCTACAGGAACAGCAACTCCAATAGCAGGACTTATGGTTATGT ATGGATTTAATGATCCTAAAACAGTTACAATAGCAGCTATATTCTGTGCTTTGGCAGGAGCTTTTGCCGGATTATTAGGC TCAATAGTATTTAAAAATTATAAAATAAGAACAGTTGCAGAACTAAGGGCTGCTTCTGAAGAGCAGGAAATCGAGCAAGC TACAGCTTAA
Upstream 100 bases:
>100_bases ATTGTCGGATAAATTGTACTGATAATTACCTAGGGAAAACGTTAGCATTTTTTAAAATTTTAAATTTAATTTCAATATTT TATAAAGGGAGGAAGTAAAA
Downstream 100 bases:
>100_bases AATACATATATGATTAAATAAAAAATAACAGTGATCACATGAAAGATTATATCAATAGAAGGCTACCAGAAGAAAATATA AAAAAATCAAATAAAATCAA
Product: membrane protein
Products: NA
Alternate protein names: Regulatory Protein; Regulatory Protein PfoR; Transcriptional Regulator; Perfringolysin O Regulatory Protein; Transcriptional Regulator PfoR
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MVIFKGTLLLLICLSAFSLFSLKAPKGMKAMGALADAAVATFLVEAFQSYVGGDMLHIKLLKDTGLAAGGMGGAAAATLV PLALGVSPVYAVLIGASCYGLGILPGFVAGYALSFIVPIIEKKVPKGLDLIVCVALVAPLARLIGNGATPVVNSTLLNIG GIITVAANESPIIMGFILGGVITVVATAPLSSMALTAMLGLKGLPMAIGALSVMGSSFMNFVLFHRLKFGDRSTTISVAI EPLTQADVISANPIPVYVTNFIGGGLAGIIVTHFGLINNATGTATPIAGLMVMYGFNDPKTVTIAAIFCALAGAFAGLLG SIVFKNYKIRTVAELRAASEEQEIEQATA
Sequences:
>Translated_349_residues MVIFKGTLLLLICLSAFSLFSLKAPKGMKAMGALADAAVATFLVEAFQSYVGGDMLHIKLLKDTGLAAGGMGGAAAATLV PLALGVSPVYAVLIGASCYGLGILPGFVAGYALSFIVPIIEKKVPKGLDLIVCVALVAPLARLIGNGATPVVNSTLLNIG GIITVAANESPIIMGFILGGVITVVATAPLSSMALTAMLGLKGLPMAIGALSVMGSSFMNFVLFHRLKFGDRSTTISVAI EPLTQADVISANPIPVYVTNFIGGGLAGIIVTHFGLINNATGTATPIAGLMVMYGFNDPKTVTIAAIFCALAGAFAGLLG SIVFKNYKIRTVAELRAASEEQEIEQATA >Mature_349_residues MVIFKGTLLLLICLSAFSLFSLKAPKGMKAMGALADAAVATFLVEAFQSYVGGDMLHIKLLKDTGLAAGGMGGAAAATLV PLALGVSPVYAVLIGASCYGLGILPGFVAGYALSFIVPIIEKKVPKGLDLIVCVALVAPLARLIGNGATPVVNSTLLNIG GIITVAANESPIIMGFILGGVITVVATAPLSSMALTAMLGLKGLPMAIGALSVMGSSFMNFVLFHRLKFGDRSTTISVAI EPLTQADVISANPIPVYVTNFIGGGLAGIIVTHFGLINNATGTATPIAGLMVMYGFNDPKTVTIAAIFCALAGAFAGLLG SIVFKNYKIRTVAELRAASEEQEIEQATA
Specific function: Unknown
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35592; Mature: 35592
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIFKGTLLLLICLSAFSLFSLKAPKGMKAMGALADAAVATFLVEAFQSYVGGDMLHIKL CEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE LKDTGLAAGGMGGAAAATLVPLALGVSPVYAVLIGASCYGLGILPGFVAGYALSFIVPII EECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKKVPKGLDLIVCVALVAPLARLIGNGATPVVNSTLLNIGGIITVAANESPIIMGFILGG HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCEEHHHHHHH VITVVATAPLSSMALTAMLGLKGLPMAIGALSVMGSSFMNFVLFHRLKFGDRSTTISVAI HHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE EPLTQADVISANPIPVYVTNFIGGGLAGIIVTHFGLINNATGTATPIAGLMVMYGFNDPK ECCCCCCEECCCCCCEEEHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCC TVTIAAIFCALAGAFAGLLGSIVFKNYKIRTVAELRAASEEQEIEQATA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MVIFKGTLLLLICLSAFSLFSLKAPKGMKAMGALADAAVATFLVEAFQSYVGGDMLHIKL CEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE LKDTGLAAGGMGGAAAATLVPLALGVSPVYAVLIGASCYGLGILPGFVAGYALSFIVPII EECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKKVPKGLDLIVCVALVAPLARLIGNGATPVVNSTLLNIGGIITVAANESPIIMGFILGG HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCEEHHHHHHH VITVVATAPLSSMALTAMLGLKGLPMAIGALSVMGSSFMNFVLFHRLKFGDRSTTISVAI HHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE EPLTQADVISANPIPVYVTNFIGGGLAGIIVTHFGLINNATGTATPIAGLMVMYGFNDPK ECCCCCCEECCCCCCEEEHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCC TVTIAAIFCALAGAFAGLLGSIVFKNYKIRTVAELRAASEEQEIEQATA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA