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The map label for this gene is ycfX [C]

Identifier: 148379184

GI number: 148379184

Start: 1319946

End: 1320887

Strand: Direct

Name: ycfX [C]

Synonym: CBO1201

Alternate gene names: 148379184

Gene position: 1319946-1320887 (Clockwise)

Preceding gene: 148379183

Following gene: 148379185

Centisome position: 33.96

GC content: 29.3

Gene sequence:

>942_bases
ATGGATAATAAGAATTATTTAAGTATAGATATTGGAGGAACTTTTATTAAATACGGAGTTTTAGATCATTCAGGTAATAT
TATTTCTAAAAATAAAAAAAGAACTTCAAGAAATATAGATGATTTACTATTCGATTTATCAGAAATAGTAGAAAAGCAAT
CTGAACATATAAGTGGTATTGGTATTAGTGCTCCAGGGAAAGTAGATACAAGGGAAGGAGTAATTTATGGAGGAGGTAAT
TTAACTTTTCTAGATAATTGGCCCATAGTATCAATTCTACAGGATAAATATAAAATCCCTGTAGCAGTAGAAAATGATGG
CAAGTCAGCAGCTCTTGCAGAAATGTGGTTAGGAAATTTACAAGATGTTGATGATGGTGCTGCAATTATACTTGGTACGG
GAATTGGAGGTGGAATAGTAATAAATAAAAAGCTAAGGAAAGGAAAGCATTATTCCGCAGGGGAGATTAGTTTTATGATA
AATAAATCAGAAGAAAAAAGTTATTTAAAGTTTCATGGATTCAATGCTTCAGCGGTAAGAATGGTAAAGACAATTGGAGA
ATATTTAGGCTTATCAGATCCTTTAGATGGAGAAGCAGCGTTTAAATCTATTATTTCAGGTAATGATTTTGCAAATCAAG
TATTTATAAATTATTGTGATAGTATTGCTGAACTTATTAATAATATTCAATGTACTTTGGAGTTAGAGAAGTACGTAATA
GGTGGAGGAATTAGCACAAATAAAATATTAATTAAAGGAATTCAAAATTCATTTAATAGATTGAGAATGAGAGAGCCGTT
ATTGGAAAAATCAATACATCGTCCAATCATTCAAGCTACAAAATTTAATAATGATGCTAACCTTTATGGAGCTTTGTATA
ATCTATTATTAGATGAAGAAACTATTGATATAATAAAAAATAATGAAAATATGGGGGATTAA

Upstream 100 bases:

>100_bases
AGAAGGACATTCATTTAACACTATTGTTTTAGAATAATTATTAAGAGGATGCCCGGATAAGGGCTTCCTTTTTCAAATAA
GCTAAAAGAGGGAAAATAAT

Downstream 100 bases:

>100_bases
TTATGAAAACAAATTTTCCAGAAAATTTTTTGTGGGGTGGTGCAGTTGCAGCTAACCAATGTGAAGGAGCTTATAATATT
GATGGTAAAGGATTAAGCGT

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MDNKNYLSIDIGGTFIKYGVLDHSGNIISKNKKRTSRNIDDLLFDLSEIVEKQSEHISGIGISAPGKVDTREGVIYGGGN
LTFLDNWPIVSILQDKYKIPVAVENDGKSAALAEMWLGNLQDVDDGAAIILGTGIGGGIVINKKLRKGKHYSAGEISFMI
NKSEEKSYLKFHGFNASAVRMVKTIGEYLGLSDPLDGEAAFKSIISGNDFANQVFINYCDSIAELINNIQCTLELEKYVI
GGGISTNKILIKGIQNSFNRLRMREPLLEKSIHRPIIQATKFNNDANLYGALYNLLLDEETIDIIKNNENMGD

Sequences:

>Translated_313_residues
MDNKNYLSIDIGGTFIKYGVLDHSGNIISKNKKRTSRNIDDLLFDLSEIVEKQSEHISGIGISAPGKVDTREGVIYGGGN
LTFLDNWPIVSILQDKYKIPVAVENDGKSAALAEMWLGNLQDVDDGAAIILGTGIGGGIVINKKLRKGKHYSAGEISFMI
NKSEEKSYLKFHGFNASAVRMVKTIGEYLGLSDPLDGEAAFKSIISGNDFANQVFINYCDSIAELINNIQCTLELEKYVI
GGGISTNKILIKGIQNSFNRLRMREPLLEKSIHRPIIQATKFNNDANLYGALYNLLLDEETIDIIKNNENMGD
>Mature_313_residues
MDNKNYLSIDIGGTFIKYGVLDHSGNIISKNKKRTSRNIDDLLFDLSEIVEKQSEHISGIGISAPGKVDTREGVIYGGGN
LTFLDNWPIVSILQDKYKIPVAVENDGKSAALAEMWLGNLQDVDDGAAIILGTGIGGGIVINKKLRKGKHYSAGEISFMI
NKSEEKSYLKFHGFNASAVRMVKTIGEYLGLSDPLDGEAAFKSIISGNDFANQVFINYCDSIAELINNIQCTLELEKYVI
GGGISTNKILIKGIQNSFNRLRMREPLLEKSIHRPIIQATKFNNDANLYGALYNLLLDEETIDIIKNNENMGD

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1787363, Length=287, Percent_Identity=25.0871080139373, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786891, Length=294, Percent_Identity=25.5102040816327, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 34469; Mature: 34469

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKNYLSIDIGGTFIKYGVLDHSGNIISKNKKRTSRNIDDLLFDLSEIVEKQSEHISGI
CCCCEEEEEEECCEEEEEEEEECCCCEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GISAPGKVDTREGVIYGGGNLTFLDNWPIVSILQDKYKIPVAVENDGKSAALAEMWLGNL
CCCCCCCCCCCCCEEECCCEEEEEECCCCCEEECCCCCCCEEEECCCCCHHHHHHHHCCC
QDVDDGAAIILGTGIGGGIVINKKLRKGKHYSAGEISFMINKSEEKSYLKFHGFNASAVR
CCCCCCCEEEEECCCCCCEEEEHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCHHHHH
MVKTIGEYLGLSDPLDGEAAFKSIISGNDFANQVFINYCDSIAELINNIQCTLELEKYVI
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE
GGGISTNKILIKGIQNSFNRLRMREPLLEKSIHRPIIQATKFNNDANLYGALYNLLLDEE
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCC
TIDIIKNNENMGD
CEEEEECCCCCCC
>Mature Secondary Structure
MDNKNYLSIDIGGTFIKYGVLDHSGNIISKNKKRTSRNIDDLLFDLSEIVEKQSEHISGI
CCCCEEEEEEECCEEEEEEEEECCCCEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GISAPGKVDTREGVIYGGGNLTFLDNWPIVSILQDKYKIPVAVENDGKSAALAEMWLGNL
CCCCCCCCCCCCCEEECCCEEEEEECCCCCEEECCCCCCCEEEECCCCCHHHHHHHHCCC
QDVDDGAAIILGTGIGGGIVINKKLRKGKHYSAGEISFMINKSEEKSYLKFHGFNASAVR
CCCCCCCEEEEECCCCCCEEEEHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCHHHHH
MVKTIGEYLGLSDPLDGEAAFKSIISGNDFANQVFINYCDSIAELINNIQCTLELEKYVI
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE
GGGISTNKILIKGIQNSFNRLRMREPLLEKSIHRPIIQATKFNNDANLYGALYNLLLDEE
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCC
TIDIIKNNENMGD
CEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]