Click here to switch to the map view.

The map label for this gene is yqhC [C]

Identifier: 148379181

GI number: 148379181

Start: 1316725

End: 1317615

Strand: Reverse

Name: yqhC [C]

Synonym: CBO1198

Alternate gene names: 148379181

Gene position: 1317615-1316725 (Counterclockwise)

Preceding gene: 148379191

Following gene: 148379176

Centisome position: 33.9

GC content: 28.62

Gene sequence:

>891_bases
ATGAACAAAAACTGGCTAGATGAGGTTAAAAAATTACCCTCTGTTGATTCAAATATTAGATTTTTTGGGGGACATAAGCA
TAGTGTTGAAAAAGGTTGGTCAGTTTCAGAGGAATATCATTATGCATTTGAAATTTTGATAGTTCTAGCTGGTAAGCAGC
TAACAAAAGCTAATCAACATGAATATACAATTAATAAGAATGAAATCATCTTAATACCACCAGGATATAGACATACAAAT
ACCTGTATTTCTAAAGAGGGTATGACCTATTTCTGTGCTCATTTTGATATAGATGAGCCGCAAATTCATCATGATTTAAT
ATGCTATTGTAATTTTATATTTACAGAAGAAAATGAAATCCATCCGCACTTAAAGAATATTTTAATTAAATGGATTAACT
TATTAAATGCTGATACTTCTTCTATTCTTACCAAATTACAAACTGAAATTATACTAATTGAATTGATCACAGAACTGCTT
AAATATTGTGAAACAAAAAAAGTATTAGATGTCGAAAGTAATGATAACAGACTTTATTATGCTCGTTGTATATCTGAAAA
AATCAGACAAAACTTCCGTGAATTTTCTCTTAATCCATCTGAAGATAAGTTGGAAACACTAACAATTAAGTATATAGCTA
ATCAACTAAACATAAGCACCGGGTATTTATTAGTTAACTTTAAGTCTGTTTATAATATTTCACCTAAGAGCTATCTTAAT
CAACTAAAATTTAATGAAGCCAAAATATTTTTAGGTCAGCCTAATATTAGTCTATCTGAAATAAGTGAACGTATAGGCTA
TAGAAATGTTTCTCATTTCAGTCGCCAATTTAAATTATGGAGTGGAATCAGCCCCTATGAGTTTAGAAATATCTTACAAA
TAAAAAAATAA

Upstream 100 bases:

>100_bases
TTATCTTTATTGCACTTTAATTTTATAATCAACGTGTGATAAAATCTATATCATAAATGAATGGATTTATACCATTTTTA
AATGTATTGGAGTGAAAATT

Downstream 100 bases:

>100_bases
TATGCTAGATAAATAAAGAAGCATATTAAATAAAATATACTTCTTTATTTCCAAGCTTTATATTTATAGTGTTCTGCTAT
TCTATTAGCTGCCTTCATAC

Product: AraC family transcription regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; AraC/XylS Family Transcriptional Regulator; Arac/Xyls Family Transcriptional Regulator

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNKNWLDEVKKLPSVDSNIRFFGGHKHSVEKGWSVSEEYHYAFEILIVLAGKQLTKANQHEYTINKNEIILIPPGYRHTN
TCISKEGMTYFCAHFDIDEPQIHHDLICYCNFIFTEENEIHPHLKNILIKWINLLNADTSSILTKLQTEIILIELITELL
KYCETKKVLDVESNDNRLYYARCISEKIRQNFREFSLNPSEDKLETLTIKYIANQLNISTGYLLVNFKSVYNISPKSYLN
QLKFNEAKIFLGQPNISLSEISERIGYRNVSHFSRQFKLWSGISPYEFRNILQIKK

Sequences:

>Translated_296_residues
MNKNWLDEVKKLPSVDSNIRFFGGHKHSVEKGWSVSEEYHYAFEILIVLAGKQLTKANQHEYTINKNEIILIPPGYRHTN
TCISKEGMTYFCAHFDIDEPQIHHDLICYCNFIFTEENEIHPHLKNILIKWINLLNADTSSILTKLQTEIILIELITELL
KYCETKKVLDVESNDNRLYYARCISEKIRQNFREFSLNPSEDKLETLTIKYIANQLNISTGYLLVNFKSVYNISPKSYLN
QLKFNEAKIFLGQPNISLSEISERIGYRNVSHFSRQFKLWSGISPYEFRNILQIKK
>Mature_296_residues
MNKNWLDEVKKLPSVDSNIRFFGGHKHSVEKGWSVSEEYHYAFEILIVLAGKQLTKANQHEYTINKNEIILIPPGYRHTN
TCISKEGMTYFCAHFDIDEPQIHHDLICYCNFIFTEENEIHPHLKNILIKWINLLNADTSSILTKLQTEIILIELITELL
KYCETKKVLDVESNDNRLYYARCISEKIRQNFREFSLNPSEDKLETLTIKYIANQLNISTGYLLVNFKSVYNISPKSYLN
QLKFNEAKIFLGQPNISLSEISERIGYRNVSHFSRQFKLWSGISPYEFRNILQIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34750; Mature: 34750

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNWLDEVKKLPSVDSNIRFFGGHKHSVEKGWSVSEEYHYAFEILIVLAGKQLTKANQH
CCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCC
EYTINKNEIILIPPGYRHTNTCISKEGMTYFCAHFDIDEPQIHHDLICYCNFIFTEENEI
CEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHEEEEEEEEECCCCC
HPHLKNILIKWINLLNADTSSILTKLQTEIILIELITELLKYCETKKVLDVESNDNRLYY
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE
ARCISEKIRQNFREFSLNPSEDKLETLTIKYIANQLNISTGYLLVNFKSVYNISPKSYLN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHH
QLKFNEAKIFLGQPNISLSEISERIGYRNVSHFSRQFKLWSGISPYEFRNILQIKK
HHCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNKNWLDEVKKLPSVDSNIRFFGGHKHSVEKGWSVSEEYHYAFEILIVLAGKQLTKANQH
CCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCC
EYTINKNEIILIPPGYRHTNTCISKEGMTYFCAHFDIDEPQIHHDLICYCNFIFTEENEI
CEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHEEEEEEEEECCCCC
HPHLKNILIKWINLLNADTSSILTKLQTEIILIELITELLKYCETKKVLDVESNDNRLYY
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE
ARCISEKIRQNFREFSLNPSEDKLETLTIKYIANQLNISTGYLLVNFKSVYNISPKSYLN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHH
QLKFNEAKIFLGQPNISLSEISERIGYRNVSHFSRQFKLWSGISPYEFRNILQIKK
HHCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA