Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
---|---|
Accession | NC_009495 |
Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148379178
Identifier: 148379178
GI number: 148379178
Start: 1311404
End: 1312660
Strand: Direct
Name: 148379178
Synonym: CBO1194
Alternate gene names: NA
Gene position: 1311404-1312660 (Clockwise)
Preceding gene: 148379177
Following gene: 148379179
Centisome position: 33.74
GC content: 31.5
Gene sequence:
>1257_bases TTGAGAGTAATGGTACTTTTAATATTAGGATTATTATTAGCAGTTGCAGTTGCTCTTTTTATGGGGAAATTAATTTCAAA AGTCAAACTACCTGCTATTTTAGGTTGGTTAATTGCAGGTATGATATTAGGTCCCCATGCAGTAGGGCTTGTAAATGAAA CTACTTTAAATGCTGAATGGTACAAAACTATTGTAAATATTTTGGAGTGTGCAGTAGGGCTTTTGATTGGAACAGAACTA GTTTGGAATAAAATTAAAAAGTCAGGTAAACAACTCATAATAACAACTTTAACACAATCCTTAGGAACATTTTTTGTAGT TAGTGTAGTATTTGCAATTGTATTTTACTTTACAGGTATTCCATTATATCTTGCTTTAATTTTTGGAGGTATTGCTCTTG CAACAGCACCAGCACCTGCTTTATCCGTTGTAAGAGAATTTAAAACAGATGGTCCTGTAACTAGAACATTAATTCCTATG GCAGCTCTTGATGATATGGTAGGAGTTGTTGTATTCTTTTCCACTATTTCAATCATATCTGCTAAAATTTCAGAACAAAA GCTGCCTATATATATGATTTTATTAATTGTGCTACTACCAATTATCATTGGAATTGGTACAGGGTTGTTAGCAGGATTTT TACTTAAAAAAGAAAATACACCACAAAAAACCATAGTACTTTTAATTACAATTATATTGATATCTTCAGGTGTAGGATTT ATATTTGATAAGATAATTTTACCTGAACCAGTATTAAACTTTATGTTAATTGGAATGGCTTTTTCAGCTACGTTTGCTAA TATGATTTCAAAGAATAGATTAGAGGAAATAATGAGTGCATTTAATCCTATTTTGGATATATCAATGATTGTAGTAATAT TAAATTTAGGCACACCACTTGATTATCATTTAATTTTAGGTGCAGGATTATTTACGGCAATTTATATTATATCAAGAGCA GTAGGAAAGTATAGTGGAGCATTCTTTGGGGCAGCTATTACTCGTTCACCACAAGTAGTAAAGAAATATTTAGGACTTAC ATTACTACCACATTCAGGAGTATCATTAGTATTTACAGGAATAGCGGTTTCTGTTTTAAAAGGTCCAGCTCCAGAATGCG CAAAAATTATACAGGGTACAATTGCAGCAGCAGCAGTAATAAATGAGGTTATTGCAGTAATTGTTGCTAAAAAAGCTTTT GAATGGGCAGGAGAATTCCATAACAAATATGATATTGAACTTTGCGAAAGTAATTAA
Upstream 100 bases:
>100_bases AAACATATGAAAACTGCGAGTTTAATGGTCTAATAAAAGAACATGAAATCAAACTTGGAAAAATATTGAATATTATGCTT TATGGCATTGTAAAGGAGGA
Downstream 100 bases:
>100_bases AATAATTATTATGCAAAAAAAGAGCAAATGAATTTAGAGGGCACTGATATAGTGCTCTCAAGTAGTTTATCTTAATTTTG AGTTTTACGAAAGAAAACCT
Product: transporter, monovalent cation:proton antiporter-2 (CPA2) family
Products: NA
Alternate protein names: Transporter Monovalent CationProton Antiporter-2 Family; K+/H+ Antiporter NEM-Activated; Transporter CPA2 Family
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MRVMVLLILGLLLAVAVALFMGKLISKVKLPAILGWLIAGMILGPHAVGLVNETTLNAEWYKTIVNILECAVGLLIGTEL VWNKIKKSGKQLIITTLTQSLGTFFVVSVVFAIVFYFTGIPLYLALIFGGIALATAPAPALSVVREFKTDGPVTRTLIPM AALDDMVGVVVFFSTISIISAKISEQKLPIYMILLIVLLPIIIGIGTGLLAGFLLKKENTPQKTIVLLITIILISSGVGF IFDKIILPEPVLNFMLIGMAFSATFANMISKNRLEEIMSAFNPILDISMIVVILNLGTPLDYHLILGAGLFTAIYIISRA VGKYSGAFFGAAITRSPQVVKKYLGLTLLPHSGVSLVFTGIAVSVLKGPAPECAKIIQGTIAAAAVINEVIAVIVAKKAF EWAGEFHNKYDIELCESN
Sequences:
>Translated_418_residues MRVMVLLILGLLLAVAVALFMGKLISKVKLPAILGWLIAGMILGPHAVGLVNETTLNAEWYKTIVNILECAVGLLIGTEL VWNKIKKSGKQLIITTLTQSLGTFFVVSVVFAIVFYFTGIPLYLALIFGGIALATAPAPALSVVREFKTDGPVTRTLIPM AALDDMVGVVVFFSTISIISAKISEQKLPIYMILLIVLLPIIIGIGTGLLAGFLLKKENTPQKTIVLLITIILISSGVGF IFDKIILPEPVLNFMLIGMAFSATFANMISKNRLEEIMSAFNPILDISMIVVILNLGTPLDYHLILGAGLFTAIYIISRA VGKYSGAFFGAAITRSPQVVKKYLGLTLLPHSGVSLVFTGIAVSVLKGPAPECAKIIQGTIAAAAVINEVIAVIVAKKAF EWAGEFHNKYDIELCESN >Mature_418_residues MRVMVLLILGLLLAVAVALFMGKLISKVKLPAILGWLIAGMILGPHAVGLVNETTLNAEWYKTIVNILECAVGLLIGTEL VWNKIKKSGKQLIITTLTQSLGTFFVVSVVFAIVFYFTGIPLYLALIFGGIALATAPAPALSVVREFKTDGPVTRTLIPM AALDDMVGVVVFFSTISIISAKISEQKLPIYMILLIVLLPIIIGIGTGLLAGFLLKKENTPQKTIVLLITIILISSGVGF IFDKIILPEPVLNFMLIGMAFSATFANMISKNRLEEIMSAFNPILDISMIVVILNLGTPLDYHLILGAGLFTAIYIISRA VGKYSGAFFGAAITRSPQVVKKYLGLTLLPHSGVSLVFTGIAVSVLKGPAPECAKIIQGTIAAAAVINEVIAVIVAKKAF EWAGEFHNKYDIELCESN
Specific function: Unknown
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44814; Mature: 44814
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVMVLLILGLLLAVAVALFMGKLISKVKLPAILGWLIAGMILGPHAVGLVNETTLNAEW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHH YKTIVNILECAVGLLIGTELVWNKIKKSGKQLIITTLTQSLGTFFVVSVVFAIVFYFTGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLYLALIFGGIALATAPAPALSVVREFKTDGPVTRTLIPMAALDDMVGVVVFFSTISIIS HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKISEQKLPIYMILLIVLLPIIIGIGTGLLAGFLLKKENTPQKTIVLLITIILISSGVGF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH IFDKIILPEPVLNFMLIGMAFSATFANMISKNRLEEIMSAFNPILDISMIVVILNLGTPL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DYHLILGAGLFTAIYIISRAVGKYSGAFFGAAITRSPQVVKKYLGLTLLPHSGVSLVFTG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCEEECCCCCHHHHHHH IAVSVLKGPAPECAKIIQGTIAAAAVINEVIAVIVAKKAFEWAGEFHNKYDIELCESN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure MRVMVLLILGLLLAVAVALFMGKLISKVKLPAILGWLIAGMILGPHAVGLVNETTLNAEW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHH YKTIVNILECAVGLLIGTELVWNKIKKSGKQLIITTLTQSLGTFFVVSVVFAIVFYFTGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLYLALIFGGIALATAPAPALSVVREFKTDGPVTRTLIPMAALDDMVGVVVFFSTISIIS HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKISEQKLPIYMILLIVLLPIIIGIGTGLLAGFLLKKENTPQKTIVLLITIILISSGVGF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH IFDKIILPEPVLNFMLIGMAFSATFANMISKNRLEEIMSAFNPILDISMIVVILNLGTPL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DYHLILGAGLFTAIYIISRAVGKYSGAFFGAAITRSPQVVKKYLGLTLLPHSGVSLVFTG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCEEECCCCCHHHHHHH IAVSVLKGPAPECAKIIQGTIAAAAVINEVIAVIVAKKAFEWAGEFHNKYDIELCESN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA